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Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open Following young people with perinatal HIV infection from adolescence into adulthood: the protocol for PHACS AMP Up, a prospective cohort study rp Fo Journal: Manuscript ID Article Type: Date Submitted by the Author: Complete List of Authors: BMJ Open bmjopen-2016-011396 Protocol 03-Feb-2016 w ie ev rr ee Tassiopoulos, Katherine; Harvard T.H. Chan School of Public Health, Epidemiology Patel, Kunjal; Harvard T.H. Chan School of Public Health, Epidemiology Alperen, Julie; Harvard T.H. Chan School of Public Health, Epidemiology Kacanek, Deborah; Harvard T.H. Chan School of Public Health, Biostatistics Ellis, Angela; Frontier Science & Technology Research Foundation, Inc. Berman, Claire; Harvard T.H. Chan School of Public Health, Epidemiology Allison, Susannah; NIH, National Institute of Mental Health Hazra, Rohan; NIH, Eunice Kennedy Schriver National Institute of Child Health and Human Development Barr, Emily; University of Colorado at Denver - Anschutz Medical Campus Cantos, Krystal; Harvard T.H. Chan School of Public Health, Epidemiology Siminski, Suzanne; Frontier Science & Technology Research Foundation, Inc. Massagli, Michael; Harvard T.H. Chan School of Public Health, Epidemiology Bauermeister, Jose; University of Michigan School of Public Health, Health Behavior and Health Education Siddiqui, Danish; Tulane University Health Sciences Center, Pediatrics and Infectious Diseases Puga, Ana; Children's Diagnostic & Treatment Center Van Dyke, Russell; Tulane University Health Sciences Center, Pediatrics and Infectious Diseases Seage III, George; Harvard T.H. Chan School of Public Health, Epidemiology Secondary Subject Heading: Keywords: HIV/AIDS ly on <b>Primary Subject Heading</b>: Epidemiology EPIDEMIOLOGY, PUBLIC HEALTH, World Wide Web technology < BIOTECHNOLOGY & BIOINFORMATICS For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 1 of 28 Title: Following young people with perinatal HIV infection from adolescence into adulthood: the protocol for PHACS AMP Up, a prospective cohort study Writing Team: Katherine Tassiopoulos DSc1, Kunjal Patel DSc1, Julie Alperen DrPH1, Deborah Kacanek ScD2, Angela Ellis BS3, Claire Berman MS1, Susannah M. Allison PhD4, Rohan Hazra MD5, Emily Barr MSN6, Krystal Cantos BA1, Suzanne Siminski MBA3, Michael Massagli PhD1, Jose Bauermeister PhD7, Danish Q. Siddiqui MPH8, Ana Puga MD9, Russell Van Dyke MD8, George R. Seage III DSc1 for the Pediatric HIV/AIDS Cohort Study. 1 rp Fo Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, U.S.; 2Center for Biostatistics in AIDS Research, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, U.S.; 3 Frontier Science and Technology Research Foundation, Inc, Amherst, New York, U.S.; 4Division of AIDS Research, National Institute of Mental Health, National Institutes of Health, Bethesda, Maryland, U.S.; 5Maternal ee and Pediatric Infectious Disease Branch, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland, U.S.; 6Department of Pediatric Infectious Diseases, rr University of Colorado, Children’s Hospital Colorado, Aurora, Colorado, U.S.; 7University of Michigan, Ann Arbor; 8Department of Pediatrics, Tulane University School of Medicine, New Orleans, Louisiana, U.S.; 9Children’s ev Diagnostic & Treatment Center, Inc., Fort Lauderdale, Florida, U.S. Corresponding author: Senior Research Scientist, Department of Epidemiology 677 Huntington Ave., Kresge 817B ly Boston, MA 02115 on Harvard T.H. Chan School of Public Health w Katherine Tassiopoulos, DSc, MPH ie 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open Phone: 617-432-3265; Fax: 617-566-7805 [email protected] Keywords: adolescents, transition to adult clinical care, internet, longitudinal studies, perinatal HIV infection. Word count: 3356 Collaborator Statement: This article is being submitted for the Pediatric HIV/AIDS Cohort Study. 1 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open ABSTRACT Introduction: The first generation of adolescents born with HIV infection has reached young adulthood due to advances in treatment. It is important to continue follow-up of these individuals to assess their long-term medical, behavioral and mental health and ability to successfully transition to adulthood while coping with a chronic, potentially stigmatizing condition. To accomplish this, and to maintain their interest in long-term research participation, rp Fo we need to accommodate the changing lifestyles and interests of young adult study participants while ensuring valid data collection. We report the protocol for PHACS (Pediatric HIV/AIDS Cohort Study) AMP Up, a prospective cohort study enrolling young adult participants for longterm follow-up. rr ee Methods and analysis: AMP Up is recruiting 850 young men and women 18 years of age and older – 600 perinatally HIV-infected and a comparison group of 250 perinatally HIV-exposed, ev uninfected – at 14 clinical research sites in the United States and Puerto Rico. Recruitment began ie in April 2014 and is ongoing, with 305 participants currently enrolled. Planned follow-up is ≥ 6 years. Data is collected with a flexible hybrid of online and in-person methods. Outcomes w include: transition to adult clinical care and retention in care; end-organ diseases; malignancies; on metabolic complications; sexually transmitted infections; reproductive health; mental health and neurocognitive functioning; adherence to antiretroviral treatment; sexual behavior and substance ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 2 of 28 use; hearing and language impairments; and employment and educational achievement. Ethics and dissemination: The study received ethical approval from the Harvard T.H. Chan School of Public Health’s institutional review board (IRB) and from the IRBs of each clinical research site. All participants provide written informed consent; for cognitively-impaired individuals with legally authorized representatives, legal guardian permission and participant 2 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 3 of 28 BMJ Open assent is obtained. Findings will be disseminated through peer-reviewed journals, conference presentations and participant summaries. w ie ev rr ee rp Fo ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com 3 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open Strengths and limitations of this study • The PHACS AMP Up study will enable long-term follow-up of perinatally HIV-infected (PHIV+) young adults for evaluation of a wide range of clinical, behavioral and mental health outcomes, as well as transition to adult clinical care and adult functioning; • This study design allows flexibility in the transition from in-person to remote data rp Fo collection, and can be adopted by other prospective epidemiologic studies concerned with optimizing participant retention over the long-term; • Since AMP Up is enrolling young adults through the PHACS research clinical sites, participants may be more likely to be adherent to clinical care and supportive services; ee young adults non-adherent or lost to care may not be well-represented. w ie ev rr ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 4 of 28 4 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 5 of 28 INTRODUCTION The first generation of youth perinatally-infected with HIV (PHIV+) has reached late adolescence and young adulthood. The Pediatric HIV/AIDS Cohort Study (PHACS), the largest long-term study of perinatal HIV infection in the US, has advanced understanding of the effects of antiretroviral medications (ARVs) and HIV infection on infectious and non-infectious complications, and metabolic, growth, cardiovascular, neurodevelopmental, neurological and rp Fo behavioral outcomes among youth and adolescents.(1-17) Continued follow-up into young adulthood is needed in order to assess the longer-term effects of HIV and ARVs on these outcomes,(18, 19) and to examine issues specific to these emerging young adults, including the ee effects of transitioning from pediatric to adult health care on clinical and behavioral outcomes rr and retention in care, the attainment of milestones of adulthood including higher education and employment, reproductive outcomes, and the risks of HIV transmission to sexual partners and offspring. ie ev The PHACS Adolescent Master Protocol (AMP) is a prospective cohort study that w enrolled youth with PHIV+ and a comparison cohort of perinatally HIV exposed, uninfected youth (PHEU) who were 7-16 years old at enrollment. Participants are followed at 14 research on clinic sites across the United States including Puerto Rico. The first AMP participants reached 18 ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open years of age in 2009. While overall study retention remains strong, we found that older AMP participants were being disproportionately lost to follow-up. The AMP Up protocol was therefore conceived as a protocol tailored specifically to young adults, in order to maximize validity of data collection as well as retention of participants in continued long-term follow-up. Development of novel strategies to optimize sustained research participation is a critical challenge for all long-term epidemiologic studies,(20, 21) For young adults involved in 5 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open longitudinal studies since childhood, participation may become less appealing as they gain independence, secure employment or attend college and thereby become less willing or able to return to clinics for study visits. An additional disincentive exists if the participant does not have a personal connection with the study and its long-term objectives. Youth whose caregivers had originally provided consent and managed study visit appointments must consent for their own continuing follow-up once they reach the age of majority. This provides them with the rp Fo opportunity to decline further participation in research. There are also special challenges inherent with following youth with chronic conditions into young adulthood, including fatigue after years of time-intensive clinical and research study visits, and the transition away from their pediatric or ee adolescent clinics, where their research visits often take place, into adult care clinics.(22) Investigators conducting long-term research of young people with chronic, serious conditions rr such as HIV infection must consider the inevitable transition away from the strong support ev systems that often exist for these youth in pediatric care but which may not exist in adult care systems,(23-25) and the resulting effect on participants’ willingness and ability to continue to w participate in research as adults. ie The long-term success of epidemiologic studies of young adults will be built upon on flexible study designs that are less time intensive and more accommodating of participants’ changing lifestyles than the clinic-based studies of their youth. A growing number of papers ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 6 of 28 describe epidemiologic studies that use computer- and cell phone-based data collection strategies.(26-31) In this paper we describe the rationale for and development of AMP Up, a prospective cohort study that uses a flexible hybrid of online and in-person data collection to follow PHIV+ and PHEU youth as they enter adulthood. AMP Up was designed to address the primary scientific objective of defining the impact of HIV infection and antiretroviral therapy on 6 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 7 of 28 young people with perinatal HIV infection as they transition into adulthood. METHODS AND ANALYSIS Assessing feasibility of AMP Up protocol While national surveys suggest that most young adults in the US access and frequently use the internet,(32) socioeconomic disparities in access persist.(33) Many PHACS participants come rp Fo from socioeconomically disadvantaged backgrounds,(2) and PHACS research site staff indicated that some study participants might have limited internet access. To determine whether PHACS participants would be able to complete the online surveys through which a large proportion of data in AMP Up would be collected, we conducted a feasibility study to evaluate the use of ee internet and mobile devices and willingness to participate in online research by youth and young rr adults seen at PHACS research clinics. The results of this anonymous survey are summarized in ev Table 1. Most individuals accessed the internet more than once a day, and the majority reported being willing to participate in online research. ie Table 1. Feasibility study results: responses from anonymous survey on internet and cell phone use by participants at PHACS clinical research sites, 2012-2013 (N=300) Characteristic N (%) w Age range Female sex African American race 16-27 years 144 (48.0) ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open 212 (70.7) Hispanic ethnicity 70 (23.3) PHACS participant 134 (44.7) Internet frequency in past 3 months >once a day <once a day/>=once a week <once a week/nevera 225 (75.7) 56 (18.9) 16 (5.4) Type of internet at home 7 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open DSL/cable Dial up Wireless/3G/4G Don’t know No internet at home Missing 76 (25.3) 1 (0.3) 125 (41.8) 43 (14.3) 30 (10.0) 25 (8.3) Type of cell phone Smart phone Phone that can send/receive texts No phone/cell phone doesn’t text 240 (80.1) 26 (8.8) 34 (11.1) rp Fo Cell phone with unlimited internet Yes No Don’t know Cell phone doesn’t access internet No cell phone 207 (69.3) 52 (17.6) 6 (2.0) 6 (2.0) 28 (9.1) Willingness to participate in online researchb Talk on cell phone about health or other parts of life Go online to answer questions about health or other parts of life Go to lab instead of clinic for blood draw and other medical tests 199 (66.5) 230 (77.7) 190 (64.0) rr ee Except where indicated, missing responses to individual questions range from 0-4. a 2 respondents reported no use of internet in past 3 months. b Proportion responding ‘definitely would’ or ‘probably would’. ie ev We also considered the cognitive ability of PHACS participants to complete internet- w based instruments in AMP Up. The AMP protocol collects sexual behavior and substance use information via an audio computer-assisted self-interview (ACASI), which is self-administered on on a computer. If an ACASI is not completed at a given visit, the site records the reason. We compared full scale IQ scores from the Wechsler Intelligence Scale for Children, Fourth Edition ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 8 of 28 (34) for AMP youth unable to complete any ACASI due to cognitive limitations and those who completed one or more ACASI. The results the ACASI review are summarized in Table 2. The vast majority of AMP participants have completed at least one ACASI; the small number of participants who have not completed an ACASI because of cognitive limitations have significant impairments. 8 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 9 of 28 BMJ Open Table 2. Feasibility study results: ACASI completion and cognitive status of PHACS AMP participants ACASI Completion Status N (%) Full Scale IQ Score, mean (SD)a P valueb No ACASI completed due to cognitive limitations 16 (2.6) 45.5 (8.4)c <0.001 592 (97.4) 86.1 (15.3)c ≥ one ACASI completed Abbreviations: ACASI, Audio computer-assisted self-interview. a Full scale IQ score from Wechsler Intelligence Scale for Children, Fourth Edition (WISC-IV). b From t-test. c Due to missing WISC-IV, N for those without ACASI=12, N for ACASI completed =576. rp Fo Based on the results of the internet use survey and the ACASI review, we expect that the ee vast majority of eligible AMP Up participants will be able to complete the online surveys independently. However, as we describe below, we have incorporated accommodations for those unable to do so. AMP Up study design ie ev rr AMP Up is a prospective cohort study which conducts yearly online data collection for the w majority of self-reported information, annual medical chart abstraction and STI specimen collection, and three in-person clinic visits at Entry, Year 3, and Year 6. Individual participants on will be followed for a minimum of 6 years. The study is currently recruiting, with 305 individuals enrolled thus far. ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Study population and inclusion criteria The eligible study population for AMP Up includes all PHIV+ and PHEU young adults 18 years of age and older previously followed in AMP (including those lost to follow-up in AMP), along with other PHIV+ young adults with available lifetime history of ARV use, CD4 and HIV-1 9 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open w ie ev rr ee rp Fo 1 2 3 RNA, and major medical diagnoses. Perinatal HIV status must be documented in the patient’s 4 5 medical chart. All eligible participants are recruited from one of 14 clinical research sites across 6 7 8 the US including Puerto Rico. Enrollment opened in April 2014 to former AMP participants and 9 10 in May 2015 to other PHIV+ individuals previously involved in non-PHACS research protocols 11 12 at the clinical research sites. The targeted enrollment goal is 600 PHIV+ and 250 PHEU young 13 14 15 adults. 16 17 Evaluations and data collection methods 18 19 20 The AMP Up protocol is measuring outcomes from a wide range of domains, including: 21 22 transition to adult clinical care; employment and educational achievement; retention in health 23 24 25 care; HIV end-organ disease outcomes (renal, hepatic, cardiac, pulmonary, and peripheral and 26 27 central nervous system) and HIV-associated malignancies; metabolic complications 28 29 (dyslipidemia, hypertension, insulin resistance, hyperlactatemia, excess adiposity and fat 30 31 32 redistribution); sexually transmitted infections; reproductive health; mental health and 33 34 neurocognitive functioning; adherence to antiretroviral treatment (ART); sexual behavior and 35 36 37 substance use; and hearing and language impairments. The frequency of outcome and covariate 38 39 measurement and data collection methods are summarized in Table 3, and then the specific 40 41 information obtained with each method of data collection is described in detail. 42 43 44 45 46 47 48 Table 3. Schedule of Evaluations for the PHACS AMP Up Study 49 Study Visit Data Collection 50 Assessment 51 Method 52 53 Entry Yr 1 Yr 2 Yr 3 Yr 4 Yr 5 Yr 6 54 55 (In(In(In56 clinic) clinic) clinic) 57 58 59 10 60 ly on For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 10 of 28 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 11 of 28 Demographic and Psychosocial Factors Education, employment, housing Online survey √ √ √ √ √ √ √ Health care utilization, transition to adult clinical care Online survey √ √ √ √ √ √ √ Social support, friendships, self-efficacy Online evaluation √ Quality of life Online survey √ Online evaluation √ rp Fo Physical activity Nutrition Medical and Neuropsychological Factors Diagnoses1 Chart abstraction √ √ √ √ √ √ √ √ √ √ √ √ √ √ √ √ √ √ √ √ √ √ √ Online survey ee rr Medications Chart abstraction √ √ √ √ √ √ √ Height, weight, blood pressure1 Chart abstraction √ √ √ √ √ √ √ Body measurements Clinic visit √ Reproductive health Online survey Neurocognitive functioning Online evaluation Mental health: depression screen Interview Mental health: psychiatric diagnoses Interview Hearing Online evaluation √ Language Interview √ Labs done for clinical care Chart abstraction √ Laboratory biomarkers2 Clinic visit √ Sexually transmitted infections Self-collection √ Repository samples3 Clinic visit √ √ √ √ w √ √ √ ie ev √ √ √ √ √ √ √ √ √ ly √ √ √ √ √ √ √ √ √ √ √ √ √ √ √ on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open √ √ √ √ √ 11 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open Behavioral Factors Sexual behavior Online survey √ √ √ √ √ √ √ Substance use Online survey √ √ √ √ √ √ √ ART adherence Online survey √ √ √ √ √ √ √ 1 Pregnancies, fractures, hearing problems, height and weight are also self-reported in annual online surveys. 2 Venous lactate/pyruvate, renal biomarkers, cardiac biomarkers, fasting lipids, glucose, insulin. 3 Serum & plasma (EDTA & heparin), PBMC, throat wash/gargle, saliva, urine, vaginal swab. rp Fo Data Collection Methods. Medical chart abstraction. ee Medical and neuropsychological diagnoses, ARVs and other medications, reproductive history, rr laboratory measures, height, weight and blood pressure are abstracted from participants’ medical records. ie In-person clinic visits. ev Physical examinations, laboratory tests, interviewer-administered mental health evaluations w (Client Diagnosis Questionnaire [CDQ];(35) Centers for Epidemiologic Studies Short on Depression Scale [CES-D 10] (36)) and collection of repository storage specimens (blood, saliva, urine, vaginal swabs) are conducted. Cognitive function, hearing, emotional health and ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 12 of 28 friendship are assessed via the online NIH Toolbox(37) and language is assessed with the interview-administered Clinical Evaluation of Language Fundamentals-4th edition (CELF).(38) Physical activity is evaluated with the online Block Physical Activity Screener.(39) Self-collection of sexually transmitted infection (STI) specimens. 12 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 13 of 28 BMJ Open For participants without Neisseria gonorrhoeae and Chlamydia trachomatis testing results available in medical records during the 12 months prior to a study visit, urine and vaginal swabs are self-collected for STI testing at the local clinical laboratory. Additional urine and swab samples are taken and sent to repository for further STI testing at a central research laboratory. At in-person clinic visits, samples are self-collected at the clinic and at other time points are selfcollected either at the clinic or at home. rp Fo Online survey. The AMP Up online survey consists of a series of short modules with questions on the following topics: employment/education/housing, health care, quality of life, sexual behaviors, ee reproductive health, substance use, nutrition, and for PHIV+ participants, adherence to ART and rr transition to adult clinical care. The survey also includes an acceptability question asking if participants would prefer to take the survey at home, in the clinic, or elsewhere, and a test ev question to assess how closely participants read the survey instructions. The survey ends with ie optional questions to assess participants’ acceptability of the instrument. w Input from members of the PHACS Young Adult Community Advisory Board (YACAB) emphasized strong preference for short surveys that did not repeat questions that were answered on in earlier surveys. We therefore developed surveys that can be completed at one or multiple ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com sittings, and allow wide study visit windows. Skip patterns are embedded within and also between surveys completed at different time points, allowing follow-up surveys to be tailored to each participant based on their responses to previous surveys. Participants can opt to complete surveys at their study clinic or offsite. For individuals with cognitive limitations who cannot respond to survey questions on their own, we developed a shorter online instrument consisting of a subset of the modules (employment/education/housing, 13 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open health care utilization, medication adherence, and transition to adult HIV care) that can be completed by their caregiver. Alternatively, participants who can respond on their own but cannot self-administer the online instrument can complete a similar, interviewer-administered online survey that also includes the quality of life module. Upon completion of the survey, participants have the choice of a $75 virtual or physical gift card. This remuneration is provided in addition to funds provided by the clinical site to rp Fo compensate for food, travel, or participation in other study activities. The online surveys were piloted by research and clinic staff, YACAB members, and other young adult volunteers from outside of PHACS. Surveys are thoroughly tested prior to ee implementation to ensure the proper placement and function of skip patterns. Responses to the rr surveys are regularly reviewed to allow for modification of potentially unclear questions. Training and implementation ev Given the novelty of internet-based instruments and remote data collection to PHACS staff and ie participants, we created written instructions to guide them through important study processes, w including study registration, specimen sample collection for STI testing, registration and on navigation of the NIH Toolbox, and organization of the Entry visit. The importance of the inperson Entry visit is emphasized in the instructions, as it provides initial administration of the ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 14 of 28 online survey in a familiar setting, and preparation for the Year 1 follow-up visit where the first instance of remote data collection may take place. Research sites’ role in data collection and participant engagement Given that staff at the pediatric/adolescent clinics are often an important part of participants’ systems of support, research site staff have emphasized that their relationship with participants 14 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 15 of 28 should be maintained during this potentially turbulent period. The AMP Up protocol was therefore designed with flexibility in terms of the research sites’ role in data collection and participant engagement, allowing participants to determine a comfortable pace by which to transition from clinic-based research visits to remote online data collection. Initially, AMP Up site staff will be integrally involved with all participants through study enrollment and completion of Entry visits. For a certain subgroup of participants, this level of site involvement rp Fo will continue throughout the duration of the protocol due to personal preference or because of lack of internet access or cognitive limitations. However, it is anticipated that the ability and willingness of most young adults to return to the clinic will diminish and eventually end due to ee competing priorities; therefore accommodations have been incorporated to allow for their continued study participation entirely off-site, through chart abstraction, online data collection, and mailed-in specimen collection. ie ev Sample size rr Our targeted sample size of 600 PHIV+ and 250 PHEU young adults will allow us to address w AMP Up’s primary scientific objective of defining the impact of HIV infection and antiretroviral therapy on young adults with perinatal HIV infection as they transition into adulthood. In the on context of this study, we will be measuring many targeted outcomes, some continuous (e.g., ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open neurocognitive functioning defined as full scale IQ score) and some binary (insulin resistance, retention in adult clinical care). For comparisons between PHIV+ and PHEU young adults, continuous outcomes, the target sample size of 600 perinatally-infected versus 250 uninfected participants for the AMP Up study provides 80% power to detect a difference in means for a continuous outcome of 0.211 standard deviations based on a 2-sample t-test (assuming normality holds), and 0.216 based on a non-parametric Wilcoxon rank sum test (for skewed outcomes) at 15 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open alpha = 0.05. For example, if we were comparing the full-scale IQ scores of HIV infected vs. uninfected participants and assumed a standard deviation of 15 points, we could detect a difference of 3.16 points or more in the mean IQs. If we allow for possible loss to follow-up or incomplete/missing assessments of 4% per year for infected and 6% per year for uninfected participants for three years after enrollment into AMP Up is completed, then an adjusted sample size of 530 HIV-infected vs. 208 HIV-uninfected participants provides 80% power to detect a rp Fo difference of 0.229 standard deviations, or 3.44 points in mean IQ scores. Once we adjust for potential confounders, we will typically lose some power so the minimum detectable difference will usually increase. ee For binary outcomes, the minimum detectable odds ratios we can detect based on rr comparing HIV-infected vs. uninfected participants, at 80% power with a 0.05 significance level, ranges from 1.57 to 2.64 depending on underlying rate of the event in the comparison (PHEU) ev cohort, which we have varied in these sample size calculations to be between 4% and 30%. For ie simplicity here, it is assumed that the event rate is higher in the HIV-infected group than the PHEU group. w For comparisons within PHIV+ young adults we may wish, for example, to compare on those PHIV+ young adults who initiated ART before age 5 versus those who initiated ART at a ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 16 of 28 later age. The detectable differences in means relative to the standard deviation that can be detected assuming 530 PHIV+ participants (under an assumption of 4% loss per year) when two subgroups of the PHIV+ participants are being compared ranges from 0.24 to 0.41, depending on the sample percentages in each subgroup. When comparing proportions with events between two subgroups, the minimum detectable odds ratios range from 1.63 to 4.01 depending on the percent in each subgroup. 16 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 17 of 28 Statistical analyses Participants’ baseline characteristics (including demographics and clinical characteristics) will be described using frequencies for categorical variables and means, medians, standard deviations and interquartile range for continuous variables. Incidence estimates for outcomes will be calculated under a Poisson distribution based on participant-years of follow-up. rp Fo When evaluating associations between the many exposures and outcomes of interest in this study, multivariable regression analyses will be conducted adjusting for potential confounding factors. For cross-sectional associations, logistic and linear regression models will be used. Cox proportional hazards models will be used for factors associated with incidence of ee commonly-occurring outcomes, and Poisson regression for incidence of outcomes that are rr observed to occur less frequently. For evaluation of factors associated with changes in outcomes over time, generalized estimating equation (GEE) or mixed effects models will be employed. ev Effect modification of associations by specific covariates will be evaluated by adding interaction ie terms to the multivariable regression models. A probability level of 0.05 will be used for all w analyses. All analyses will be conducted using SAS Version 9.2 (SAS Institute Inc., Cary, NC). ly ETHICS AND DISSEMINATION on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open The AMP Up protocol was approved by the Harvard T.H. Chan School of Public Health’s Institutional Review Board (IRB) as well as the IRBs at the 14 participating sites. Participants provide written informed consent; for cognitively-impaired individuals with legally authorized representatives, legal guardian permission and participant assent is obtained. To protect participant confidentiality, in addition to an anonymized Participant Identifier 17 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open assigned to all PHACS participants, AMP Up participants are assigned a Personal Identification Number and Keyword to enter and submit online survey data. Written instructions were also developed for participants to provide steps to maintain their privacy when participating in webbased research. DatStat,(40) which hosts the AMP Up online surveys, maintains stringent levels of encryption and data storage that exceed both industry standards for Internet security and IRB standards for the protection of research participants and electronic records. DatStat’s technology rp Fo platform, including servers, databases, and web presences, employ multiple layers of security features to protect research participants and their data. Dissemination ee The findings from this study will be disseminated through peer-reviewed journals, national and rr international conference presentations, and to study participants through participant summaries that are presented in YACAB newsletters and in a recently-developed participant website. ie DISCUSSION ev Many PHACS participants have a strong connection with their clinical research site, as expressed w by YACAB members and site staff. This connection may minimize the participation and on retention issues experienced by other epidemiologic studies recruiting and following participants entirely online.(41) The long-term success of AMP Up will be tested as more participants ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 18 of 28 relocate, attend college, transfer their clinical care to adult clinics (a process typically completed by age 25), or take on work and family responsibilities that preclude them from completing study assessments in the clinic at which they enrolled in AMP Up. While our initial success may hinge upon the strong connections participants have with their sites, in order to successfully transition them to remote visits we will need to encourage direct connections between participants and the PHACS study itself. For this reason we are taking steps to strengthen the association AMP Up 18 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 19 of 28 participants have with PHACS. This began with the involvement of AMP participants in the development of AMP Up, and has continued with the development of the YACAB and of the participant website, through which participants link to their online surveys, access information on health, education and housing opportunities, and connect with other study members. Given it will be important for the majority of AMP participants to successfully enroll into AMP Up as they reach 18 years of age, we are beginning to examine enrollment trends and rp Fo reasons for not enrolling. Additional challenges in recruitment and study retention will arise when AMP Up opens enrollment to PHIV+ young adults not previously involved in research protocols at our research clinics. We are exploring methods to offer web-based informed ee consent forms, enrollment and medical record release authorizations for these potential participants. rr In some aspects the first generation of perinatally HIV-infected youth is unique. Many of ev these young people were born before the advent of effective antiretroviral therapy and were not ie expected to live past childhood. This expectation may have profound consequences for their w transition into young adulthood, a transition which is of particular research interest both domestically and internationally. To potentiate the opportunity to collaboratively study on transition, we have shared the AMP Up protocol and online survey instrument with other, global ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open networks whose aims include an examination of the transition into adult clinical care for young people infected with HIV, including the International Epidemiologic Databases to Evaluate AIDS (IeDEA) (42) and EuroCoord.(43) The design of AMP Up, which allows flexibility in the transition from in-person to remote data collection, can also enhance long-term research possibilities for a broader set of studies. Investigations undertaking long-term follow-up of young adults with chronic conditions, including birth or early childhood cohorts, or more 19 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open generally, any epidemiologic studies for which long-term success is contingent upon the ability to retain participants’ interest and long-term commitment, can potentially benefit from adopting this study design. w ie ev rr ee rp Fo ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 20 of 28 20 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 21 of 28 BMJ Open Author contributions: Author KT was integrally involved in conception and design of the protocol and drafting of the manuscript; authors GS, RVD, RH and SA were integrally involved in conception and design of the protocol, reviewed the manuscript and provided revisions; author KP was involved in design of the protocol and provided critical input on content and organization of the paper; author JA was involved in design and implementation of the protocol, wrote segments of the manuscript’s Methods section and provided critical feedback on the rp Fo manuscript in full; authors KC, SS, MM, AE, CB and DK were involved in development of one or more of the protocol’s data collection instruments, reviewed the manuscript and provided important revisions; authors JB and DS provided important insight as to the structure and content ee of the online survey instrument, reviewed and revised the manuscript, and authors EB and AP participate in data acquisition and reviewed and revised the manuscript. rr Competing Interests: No, there are no competing interests ev Funding: The Pediatric HIV/AIDS Cohort Study (PHACS) was supported by the Eunice ie Kennedy Shriver National Institute of Child Health and Human Development with co-funding w from the National Institute on Drug Abuse, the National Institute of Allergy and Infectious Diseases, the Office of AIDS Research, the National Institute of Mental Health, the National on Institute of Neurological Disorders and Stroke, the National Institute on Deafness and Other ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Communication Disorders, the National Heart Lung and Blood Institute, the National Institute of Dental and Craniofacial Research, and the National Institute on Alcohol Abuse and Alcoholism, through cooperative agreements with the Harvard T.H. Chan School of Public Health (HD052102) and the Tulane University School of Medicine (HD052104). Note: The conclusions and opinions expressed in this article are those of the authors and do not necessarily reflect those of the National Institutes of Health or U.S. Department of Health and 21 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open Human Services. Acknowledgements: We thank the children and families for their participation in PHACS, and the individuals and institutions involved in the conduct of PHACS. The study was supported by the Eunice Kennedy rp Fo Shriver National Institute of Child Health and Human Development with co-funding from the National Institute on Drug Abuse, the National Institute of Allergy and Infectious Diseases, the Office of AIDS Research, the National Institute of Mental Health, the National Institute of Neurological Disorders and Stroke, the National Institute on Deafness and Other Communication ee Disorders, the National Heart Lung and Blood Institute, the National Institute of Dental and rr Craniofacial Research, and the National Institute on Alcohol Abuse and Alcoholism, through ev cooperative agreements with the Harvard T.H. Chan School of Public Health (HD052102) (Principal Investigator: George Seage; Project Director: Julie Alperen) and the Tulane University ie School of Medicine (HD052104) (Principal Investigator: Russell Van Dyke; Co-Principal w Investigators: Kenneth Rich, Ellen Chadwick; Project Director: Patrick Davis). Data management services were provided by Frontier Science and Technology Research Foundation on (PI: Suzanne Siminski), and regulatory services and logistical support were provided by Westat, Inc (PI: Julie Davidson). ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 22 of 28 The following institutions, clinical site investigators and staff participated in conducting PHACS AMP and AMP Up in 2015, in alphabetical order: Ann & Robert H. Lurie Children’s Hospital of Chicago: Ram Yogev, Margaret Ann Sanders, Kathleen Malee, Scott Hunter; 22 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 23 of 28 Baylor College of Medicine: William Shearer, Mary Paul, Norma Cooper, Lynnette Harris; Bronx Lebanon Hospital Center: Murli Purswani, Mahboobullah Baig, Anna Cintron; Children's Diagnostic & Treatment Center: Ana Puga, Sandra Navarro, Patricia Garvie, James Blood; Children’s Hospital, Boston: Sandra Burchett, Nancy Karthas, Betsy Kammerer; Jacobi Medical Center: Andrew Wiznia, Marlene Burey, Molly Nozyce; Rutgers - New Jersey Medical School: Arry Dieudonne, Linda Bettica, Susan Adubato; St. Christopher’s Hospital rp Fo for Children: Janet Chen, Maria Garcia Bulkley, Latreaca Ivey, Mitzie Grant; St. Jude Children's Research Hospital: Katherine Knapp, Kim Allison, Megan Wilkins; San Juan Hospital/Department of Pediatrics: Midnela Acevedo-Flores, Heida Rios, Vivian Olivera; ee Tulane University Health Sciences Center: Margarita Silio, Medea Jones, Patricia Sirois; University of California, San Diego: Stephen Spector, Kim Norris, Sharon Nichols; rr University of Colorado Denver Health Sciences Center: Elizabeth McFarland, Alisa Katai, ev Jennifer Dunn, Suzanne Paul; University of Miami: Gwendolyn Scott, Patricia Bryan, Elizabeth Willen. w Conflicts of Interests: None reported. ie ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open 23 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open References: 1. Jacobson DL, Patel K, Siberry GK, et al. Body fat distribution in perinatally HIV-infected and HIVexposed but uninfected children in the era of highly active antiretroviral therapy: outcomes from the Pediatric HIV/AIDS Cohort Study. Am J Clin Nutr 2011;94(6):1485-95. 2. Malee KM, Tassiopoulos K, Huo Y, et al. Mental health functioning among children and adolescents with perinatal HIV infection and perinatal HIV exposure. AIDS Care 2011;23(12):1533-44. 3. Miller TI, Borkowsky W, DiMeglio LA, et al. Metabolic abnormalities and viral replication are associated with biomarkers of vascular dysfunction in HIV-infected children. HIV Med 2012;13(5):264-75. 4. Patel K, Wang J, Jacobson DL, et al. Aggregate risk of cardiovascular disease among adolescents perinatally infected with the human immunodeficiency virus. Circulation 2014;129(11):1204-12. 5. Purswani M, Patel K, Kopp JB, et al. Tenofovir treatment duration predicts proteinuria in a multiethnic United States Cohort of children and adolescents with perinatal HIV-1 infection. Pediatr Infect Dis J 2013;32(5):495-500. 6. Rice ML, Buchanan AL, Siberry GK, et al. Language impairment in children perinatally infected with HIV compared to children who were HIV-exposed and uninfected. J Dev Behav Pediatr 2012;33(2):112-23. 7. Siberry GK, Patel K, Van Dyke RB, et al. CD4+ lymphocyte-based immunologic outcomes of perinatally HIV-infected children during antiretroviral therapy interruption. J Acquir Immune Defic Syndr 2011;57(3):223-9. 8. Tassiopoulos K, Moscicki AB, Mellins C, et al. Sexual risk behavior among youth with perinatal HIV infection in the United States: predictors and implications for intervention development. Clin Infect Dis 2013;56(2):283-90. 9. Torre P, 3rd, Zeldow B, Hoffman HJ, et al. Hearing loss in perinatally HIV-infected and HIVexposed but uninfected children and adolescents. Pediatr Infect Dis J 2012;31(8):835-41. 10. Van Dyke RB, Patel K, Siberry GK, et al. Antiretroviral treatment of US children with perinatally acquired HIV infection: temporal changes in therapy between 1991 and 2009 and predictors of immunologic and virologic outcomes. J Acquir Immune Defic Syndr 2011;57(2):165-73. 11. Alperen J, Brummel S, Tassiopoulos K, et al. Prevalence of and risk factors for substance use among perinatally human immunodeficiency virus-infected and perinatally exposed but uninfected youth. J Adolesc Health 2014;54(3):341-9. 12. Williams PL, Abzug MJ, Jacobson DL, et al. Pubertal onset in children with perinatal HIV infection in the era of combination antiretroviral treatment. AIDS 2013;27(12):1959-70. 13. Mellins CA, Tassiopoulos K, Malee K, et al. Behavioral health risks in perinatally HIV-exposed youth: co-occurrence of sexual and drug use behavior, mental health problems, and nonadherence to antiretroviral treatment. AIDS Patient Care STDS 2011;25(7):413-22. 14. Geffner ME, Patel K, Miller TL, et al. Factors associated with insulin resistance among children and adolescents perinatally infected with HIV-1 in the pediatric HIV/AIDS cohort study. Horm Res Paediatr 2011;76(6):386-91. 15. Lipshultz SE, Williams PL, Wilkinson JD, et al. Cardiac status of children infected with human immunodeficiency virus who are receiving long-term combination antiretroviral therapy: results from the Adolescent Master Protocol of the Multicenter Pediatric HIV/AIDS Cohort Study. JAMA w ie ev rr ee rp Fo ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 24 of 28 24 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 25 of 28 Pediatr 2013;167(6):520-7. 16. The Pediatric HIV/AIDS Cohort Study (PHACS). (https://phacsstudy.org/). (Accessed January 2016). 17. DiMeglio LA, Wang J, Siberry GK, et al. Bone mineral density in children and adolescents with perinatal HIV infection. AIDS 2013;27(2):211-20. 18. Sohn AH, Hazra R. The changing epidemiology of the global paediatric HIV epidemic: keeping track of perinatally HIV-infected adolescents. J Int AIDS Soc 2013;16:18555. 19. Mofenson LM, Cotton MF. The challenges of success: adolescents with perinatal HIV infection. J Int AIDS Soc 2013;16:18650. 20. Galea S, Tracy M. Participation rates in epidemiologic studies. Ann Epidemiol 2007;17(9):643-53. 21. Morton LM, Cahill J, Hartge P. Reporting participation in epidemiologic studies: a survey of practice. Am J Epidemiol 2006;163(3):197-203. 22. Callahan ST, Winitzer RF, Keenan P. Transition from pediatric to adult-oriented health care: a challenge for patients with chronic disease. Curr Opin Pediatr 2001;13(4):310-6. 23. Vander Stoep A, Beresford SA, Weiss NS, et al. Community-based study of the transition to adulthood for adolescents with psychiatric disorder. Am J Epidemiol 2000;152(4):352-62. 24. Fair CD, Sullivan K, Dizney R, et al. "It's like losing a part of my family": transition expectations of adolescents living with perinatally acquired HIV and their guardians. AIDS Patient Care STDS 2012;26(7):423-9. 25. Transitioning HIV-infected youth into adult health care. Pediatrics 2013;132(1):192-7. 26. Baer A, Saroiu S, Koutsky LA. Obtaining sensitive data through the Web: an example of design and methods. Epidemiology 2002;13(6):640-5. 27. Smith B, Smith TC, Gray GC, et al. When epidemiology meets the Internet: Web-based surveys in the Millennium Cohort Study. Am J Epidemiol 2007;166(11):1345-54. 28. Weisel CP, Weiss SH, Tasslimi A, et al. Development of a Web-based questionnaire to collect exposure and symptom data in children and adolescents with asthma. Ann Allergy Asthma Immunol 2008;100(2):112-9. 29. Huntington A, Gilmour J, Schluter P, et al. The Internet as a research site: establishment of a web-based longitudinal study of the nursing and midwifery workforce in three countries. J Adv Nurs 2009;65(6):1309-17. 30. Huybrechts KF, Mikkelsen EM, Christensen T, et al. A successful implementation of eepidemiology: the Danish pregnancy planning study 'Snart-Gravid'. Eur J Epidemiol 2010;25(5):297-304. 31. van Gelder MM, Bretveld RW, Roeleveld N. Web-based questionnaires: the future in epidemiology? Am J Epidemiol 2010;172(11):1292-8. 32. Lenhart A. Teen, Social Media and Technology Oveview 2015. 2015. (http://www.pewinternet.org/files/2015/04/PI_TeensandTech_Update2015_0409151.pd). (Accessed January 2016). 33. File T, Camille R. Computer and Internet Use in the United States: 2013. American Community Survey Reports, ACS-28. Washington D.C.; 2014. (https://www.census.gov/content/dam/Census/library/publications/2014/acs/acs-28.pdf). (Accessed December 2015). 34. Wechsler D. The Wechsler Intelligence Scale for Children-Fourth Edition. San Antonio, TX: The Psychological Corporation; 2003. w ie ev rr ee rp Fo ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open 25 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open 35. Aidala A, Havens J, Mellins CA, et al. Development and validation of the Client Diagnostic Questionnaire (CDQ): A mental health screening tool for use in HIV/AIDS service settings. Psychol Health Med 2004;9:362-80. 36. Zhang W, O'Brien N, Forrest JI, et al. Validating a shortened depression scale (10 item CES-D) among HIV-positive people in British Columbia, Canada. PLoS One 2012;7(7):e40793. 37. Gershon RC, Wagster MV, Hendrie HC, et al. NIH toolbox for assessment of neurological and behavioral function. Neurology 2013;80(11 Suppl 3):S2-6. 38. Semel E, Wiig E, Secord W. Clinical evaluation of language fundamentals-4th edition. San Antonio, TX: The Psychological Corporation 2003. 39. NutritionQuest. Block Physical Activity Screener - Adults. (https://nutritionquest.com/assessment/list-of-questionnaires-and-screeners/). (Accessed September 2015). 40. DatStat. DatStat. (http://www.datstat.com). (Accessed January 2016). 41. Bajardi P, Paolotti D, Vespignani A, et al. Association between recruitment methods and attrition in Internet-based studies. PLoS One 2014;9(12):e114925. 42. International Epidemiologic Databases to Evaluate AIDS (IeDEA). (http://www.iedea.org/). (Accessed January 2016). 43. Enhancing clinical and epidemiological HIV research in Europe through cohort collaboration (EuroCoord). (http://www.eurocoord.net/). (Accessed January 2016). w ie ev rr ee rp Fo ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 26 of 28 26 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 27 of 28 STROBE 2007 (v4) Statement—Checklist of items that should be included in reports of cohort studies PHACS AMP Up Protocol Section/Topic Title and abstract Item # 1 Fo Recommendation Reported on page # (a) Indicate the study’s design with a commonly used term in the title or the abstract 2 rp (b) Provide in the abstract an informative and balanced summary of what was done and what was found Introduction ee Background/rationale 2 Explain the scientific background and rationale for the investigation being reported Objectives 3 State specific objectives, including any prespecified hypotheses Study design 4 Present key elements of study design early in the paper Setting 5 Describe the setting, locations, and relevant dates, including periods of recruitment, exposure, follow-up, and data Participants 6 (a) Give the eligibility criteria, and the sources and methods of selection of participants. Describe methods of follow-up Methods rr 5-6 6 9-10 ev collection 2 iew 9 9-10 (b) For matched studies, give matching criteria and number of exposed and unexposed Variables 7 Clearly define all outcomes, exposures, predictors, potential confounders, and effect modifiers. Give diagnostic criteria, if applicable 10-13 Data sources/ measurement 8* For each variable of interest, give sources of data and details of methods of assessment (measurement). Describe comparability of assessment methods if there is more than one group 10-13 Bias 9 Describe any efforts to address potential sources of bias 18-19 Study size 10 Explain how the study size was arrived at Quantitative variables 11 Explain how quantitative variables were handled in the analyses. If applicable, describe which groupings were chosen and on ly 15 why Statistical methods 12 (a) Describe all statistical methods, including those used to control for confounding (b) Describe any methods used to examine subgroups and interactions (c) Explain how missing data were addressed (d) If applicable, explain how loss to follow-up was addressed (e) Describe any sensitivity analyses For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml 16-17 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 BMJ Open BMJ Open Results Participants 13* (a) Report numbers of individuals at each stage of study—eg numbers potentially eligible, examined for eligibility, confirmed eligible, included in the study, completing follow-up, and analysed (b) Give reasons for non-participation at each stage Fo (c) Consider use of a flow diagram Descriptive data 14* (a) Give characteristics of study participants (eg demographic, clinical, social) and information on exposures and potential confounders 9-13 rp (b) Indicate number of participants with missing data for each variable of interest (c) Summarise follow-up time (eg, average and total amount) ee Outcome data 15* Report numbers of outcome events or summary measures over time Main results 16 (a) Give unadjusted estimates and, if applicable, confounder-adjusted estimates and their precision (eg, 95% confidence rr interval). Make clear which confounders were adjusted for and why they were included (b) Report category boundaries when continuous variables were categorized ev (c) If relevant, consider translating estimates of relative risk into absolute risk for a meaningful time period Other analyses 17 Report other analyses done—eg analyses of subgroups and interactions, and sensitivity analyses 18 Summarise key results with reference to study objectives Interpretation 20 Give a cautious overall interpretation of results considering objectives, limitations, multiplicity of analyses, results from Generalisability 21 Discuss the generalisability (external validity) of the study results 22 Give the source of funding and the role of the funders for the present study and, if applicable, for the original study on Discussion Key results Limitations similar studies, and other relevant evidence Other information Funding which the present article is based iew on ly 20 *Give information separately for cases and controls in case-control studies and, if applicable, for exposed and unexposed groups in cohort and cross-sectional studies. Note: An Explanation and Elaboration article discusses each checklist item and gives methodological background and published examples of transparent reporting. The STROBE checklist is best used in conjunction with this article (freely available on the Web sites of PLoS Medicine at http://www.plosmedicine.org/, Annals of Internal Medicine at http://www.annals.org/, and Epidemiology at http://www.epidem.com/). Information on the STROBE Initiative is available at www.strobe-statement.org. For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 Page 28 of 28 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open Following young people with perinatal HIV infection from adolescence into adulthood: the protocol for PHACS AMP Up, a prospective cohort study rp Fo Journal: Manuscript ID Article Type: Date Submitted by the Author: Complete List of Authors: BMJ Open bmjopen-2016-011396.R1 Protocol 03-May-2016 w ie ev rr ee Tassiopoulos, Katherine; Harvard T.H. Chan School of Public Health, Epidemiology Patel, Kunjal; Harvard T.H. Chan School of Public Health, Epidemiology Alperen, Julie; Harvard T.H. Chan School of Public Health, Epidemiology Kacanek, Deborah; Harvard T.H. Chan School of Public Health, Biostatistics Ellis, Angela; Frontier Science & Technology Research Foundation, Inc. Berman, Claire; Harvard T.H. Chan School of Public Health, Epidemiology Allison, Susannah; NIH, National Institute of Mental Health Hazra, Rohan; NIH, Eunice Kennedy Schriver National Institute of Child Health and Human Development Barr, Emily; University of Colorado at Denver - Anschutz Medical Campus Cantos, Krystal; Harvard T.H. Chan School of Public Health, Epidemiology Siminski, Suzanne; Frontier Science & Technology Research Foundation, Inc. Massagli, Michael; Harvard T.H. Chan School of Public Health, Epidemiology Bauermeister, Jose; University of Michigan School of Public Health, Health Behavior and Health Education Siddiqui, Danish; Tulane University Health Sciences Center, Pediatrics and Infectious Diseases Puga, Ana; Children's Diagnostic & Treatment Center Van Dyke, Russell; Tulane University Health Sciences Center, Pediatrics and Infectious Diseases Seage III, George; Harvard T.H. Chan School of Public Health, Epidemiology Secondary Subject Heading: Keywords: HIV/AIDS ly on <b>Primary Subject Heading</b>: Epidemiology EPIDEMIOLOGY, PUBLIC HEALTH, World Wide Web technology < BIOTECHNOLOGY & BIOINFORMATICS For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 1 of 29 Title: Following young people with perinatal HIV infection from adolescence into adulthood: the protocol for PHACS AMP Up, a prospective cohort study Writing Team: Katherine Tassiopoulos DSc1, Kunjal Patel DSc1, Julie Alperen DrPH1, Deborah Kacanek ScD2, Angela Ellis BS3, Claire Berman MS1, Susannah M. Allison PhD4, Rohan Hazra MD5, Emily Barr MSN6, Krystal Cantos BA1, Suzanne Siminski MBA3, Michael Massagli PhD1, Jose Bauermeister PhD7, Danish Q. Siddiqui MPH8, Ana Puga MD9, Russell Van Dyke MD8, George R. Seage III DSc1 for the Pediatric HIV/AIDS Cohort Study. 1 rp Fo Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, U.S.; 2Center for Biostatistics in AIDS Research, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, U.S.; 3 Frontier Science and Technology Research Foundation, Inc, Amherst, New York, U.S.; 4Division of AIDS Research, National Institute of Mental Health, National Institutes of Health, Bethesda, Maryland, U.S.; 5Maternal ee and Pediatric Infectious Disease Branch, Eunice Kennedy Shriver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland, U.S.; 6Department of Pediatric Infectious Diseases, rr University of Colorado, Children’s Hospital Colorado, Aurora, Colorado, U.S.; 7Department of Health Behavior and Health Education, University of Michigan School of Public Health, Ann Arbor, Michigan, U.S.; 8Department of ev Pediatrics, Tulane University School of Medicine, New Orleans, Louisiana, U.S.; 9Children’s Diagnostic & Treatment Center, Inc., Fort Lauderdale, Florida, U.S. Katherine Tassiopoulos, DSc, MPH Harvard T.H. Chan School of Public Health ly 677 Huntington Ave., Kresge 817B on Senior Research Scientist, Department of Epidemiology w Corresponding author: ie 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open Boston, MA 02115 Phone: 617-432-3265; Fax: 617-566-7805 [email protected] Keywords: adolescents, transition to adult clinical care, internet, longitudinal studies, perinatal HIV infection. Word count: 3441 1 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open Collaborator Statement: This article is being submitted for the Pediatric HIV/AIDS Cohort Study. w ie ev rr ee rp Fo ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 2 of 29 2 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 3 of 29 ABSTRACT Introduction: The first generation of adolescents born with HIV infection has reached young adulthood due to advances in treatment. It is important to continue follow-up of these individuals to assess their long-term medical, behavioral and mental health and ability to successfully transition to adulthood while coping with a chronic, potentially stigmatizing condition. To accomplish this, and to maintain their interest in long-term research participation, we need to rp Fo accommodate the changing lifestyles and interests of young adult study participants while ensuring valid data collection. We report the protocol for PHACS (Pediatric HIV/AIDS Cohort Study) AMP Up, a prospective cohort study enrolling young adult participants for long-term follow-up. rr ee Methods and analysis: AMP Up is recruiting 850 young men and women 18 years of age and older – 600 perinatally HIV-infected and a comparison group of 250 perinatally HIV-exposed, ev uninfected – at 14 clinical research sites in the United States and Puerto Rico. Recruitment began ie in April 2014 and is ongoing, with 305 participants currently enrolled. Planned follow-up is ≥ 6 years. Data is collected with a flexible hybrid of online and in-person methods. Outcomes w include: transition to adult clinical care and retention in care; end-organ diseases; malignancies; on metabolic complications; sexually transmitted infections; reproductive health; mental health and neurocognitive functioning; adherence to antiretroviral treatment; sexual behavior and substance ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open use; hearing and language impairments; and employment and educational achievement. Ethics and dissemination: The study received ethical approval from the Harvard T.H. Chan School of Public Health’s institutional review board (IRB) and from the IRBs of each clinical research site. All participants provide written informed consent; for cognitively-impaired individuals with legally authorized representatives, legal guardian permission and participant 3 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open assent is obtained. Findings will be disseminated through peer-reviewed journals, conference presentations and participant summaries. w ie ev rr ee rp Fo ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 4 of 29 4 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 5 of 29 Strengths and limitations of this study • The PHACS AMP Up study will enable long-term follow-up of perinatally HIV-infected (PHIV+) young adults for evaluation of a wide range of clinical, behavioral and mental health outcomes, as well as transition to adult clinical care and adult functioning; • This study design allows flexibility in the transition from in-person to remote data rp Fo collection, and can be adopted by other prospective epidemiologic studies concerned with optimizing participant retention over the long-term; • Since AMP Up is enrolling young adults through the PHACS research clinical sites, participants may be more likely to be adherent to clinical care and supportive services; ee young adults non-adherent or lost to care may not be well-represented. w ie ev rr ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open 5 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open INTRODUCTION The first generation of youth perinatally-infected with HIV (PHIV+) has reached late adolescence and young adulthood. The Pediatric HIV/AIDS Cohort Study (PHACS), the largest long-term study of perinatal HIV infection in the US, has advanced understanding of the effects of antiretroviral medications (ARVs) and HIV infection on infectious and non-infectious complications, and metabolic, growth, cardiovascular, neurodevelopmental, neurological and rp Fo behavioral outcomes among youth and adolescents.(1-17) Continued follow-up into young adulthood is needed in order to assess the longer-term effects of HIV and ARVs on these outcomes,(18, 19) and to examine issues specific to these emerging young adults, including the ee effects of transitioning from pediatric to adult health care on clinical and behavioral outcomes rr and retention in care, the attainment of milestones of adulthood including higher education and employment, reproductive outcomes, and the risks of HIV transmission to sexual partners and offspring. ie ev The PHACS Adolescent Master Protocol (AMP) is a prospective cohort study that w enrolled youth with PHIV+ and a comparison cohort of perinatally HIV exposed, uninfected youth (PHEU) who were 7-16 years old at enrollment. Participants are followed at 14 research on clinic sites across the United States including Puerto Rico. The first AMP participants reached 18 ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 6 of 29 years of age in 2009. While overall study retention remains strong, we found that older AMP participants were being disproportionately lost to follow-up. The AMP Up protocol was therefore conceived as a protocol tailored specifically to young adults, in order to maximize validity of data collection as well as retention of participants in continued long-term follow-up. Development of novel strategies to optimize sustained research participation is a critical challenge for all long-term epidemiologic studies.(20, 21) For young adults involved in 6 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 7 of 29 BMJ Open longitudinal studies since childhood, participation may become less appealing as they gain independence, secure employment or attend college and thereby become less willing or able to return to clinics for study visits. An additional disincentive exists if the participant does not have a personal connection with the study and its long-term objectives. Youth whose caregivers had originally provided consent and managed study visit appointments must consent for their own continuing follow-up once they reach the age of majority. This provides them with the rp Fo opportunity to decline further participation in research. There are also special challenges inherent with following youth with chronic conditions into young adulthood, including fatigue after years of time-intensive clinical and research study visits, and the transition away from their pediatric or ee adolescent clinics, where their research visits often take place, into adult care clinics.(22) Investigators conducting long-term research of young people with chronic, serious conditions rr such as HIV infection must consider the inevitable transition away from the strong support ev systems that often exist for these youth in pediatric care but which may not exist in adult care systems,(23-25) and the resulting effect on participants’ willingness and ability to continue to w participate in research as adults. ie The long-term success of epidemiologic studies of young adults will be built upon on flexible study designs that are less time intensive and more accommodating of participants’ changing lifestyles than the clinic-based studies of their youth. A growing number of papers ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com describe epidemiologic studies that use computer- and cell phone-based data collection strategies.(26-31) In this paper we describe the rationale for and development of AMP Up, a prospective cohort study that uses a flexible hybrid of online and in-person data collection to follow PHIV+ and PHEU youth as they enter adulthood. AMP Up was designed to address the primary scientific objective of defining the impact of HIV infection and antiretroviral therapy on 7 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open young people with perinatal HIV infection as they transition into adulthood. METHODS AND ANALYSIS Assessing feasibility of AMP Up protocol While national surveys suggest that most young adults in the US access and frequently use the internet,(32) socioeconomic disparities in access persist.(33) Many PHACS participants come rp Fo from socioeconomically disadvantaged backgrounds,(2) and PHACS research site staff indicated that some study participants might have limited internet access. To determine whether PHACS participants would be able to complete the online surveys through which a large proportion of data in AMP Up would be collected, we conducted a feasibility study to evaluate the use of ee internet and mobile devices and willingness to participate in online research by youth and young rr adults seen at PHACS research clinics. The results of this anonymous survey are summarized in ev Table 1. Most individuals accessed the internet more than once a day, and the majority reported being willing to participate in online research. ie Table 1. Feasibility study results: responses from anonymous survey on internet and cell phone use by participants at PHACS clinical research sites, 2012-2013 (N=300) Characteristic N (%) w Age range Female sex African American race 16-27 years 144 (48.0) ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 8 of 29 212 (70.7) Hispanic ethnicity 70 (23.3) PHACS participant 134 (44.7) Internet frequency in past 3 months >once a day <once a day/>=once a week <once a week/nevera 225 (75.7) 56 (18.9) 16 (5.4) Type of internet at home 8 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 9 of 29 BMJ Open DSL/cable Dial up Wireless/3G/4G Don’t know No internet at home Missing 76 (25.3) 1 (0.3) 125 (41.8) 43 (14.3) 30 (10.0) 25 (8.3) Type of cell phone Smart phone Phone that can send/receive texts No phone/cell phone doesn’t text 240 (80.1) 26 (8.8) 34 (11.1) rp Fo Cell phone with unlimited internet Yes No Don’t know Cell phone doesn’t access internet No cell phone 207 (69.3) 52 (17.6) 6 (2.0) 6 (2.0) 28 (9.1) Willingness to participate in online researchb Talk on cell phone about health or other parts of life Go online to answer questions about health or other parts of life Go to lab instead of clinic for blood draw and other medical tests 199 (66.5) 230 (77.7) 190 (64.0) rr ee Except where indicated, missing responses to individual questions range from 0-4. a 2 respondents reported no use of internet in past 3 months. b Proportion responding ‘definitely would’ or ‘probably would’. ie ev We also considered the cognitive ability of PHACS participants to complete internet- w based instruments in AMP Up. The AMP protocol collects sexual behavior and substance use information via an audio computer-assisted self-interview (ACASI), which is self-administered on on a computer. If an ACASI is not completed at a given visit, the site records the reason. We compared full scale IQ scores from the Wechsler Intelligence Scale for Children, Fourth Edition ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com (34) for AMP youth unable to complete any ACASI due to cognitive limitations and those who completed one or more ACASI. The results the ACASI review are summarized in Table 2. The vast majority of AMP participants have completed at least one ACASI; the few participants who have not completed an ACASI because of cognitive limitations have significant impairments. Table 2. Feasibility study results: ACASI completion and cognitive status of PHACS AMP 9 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open participants ACASI Completion Status N (%) Full Scale IQ Score, mean (SD)a P valueb No ACASI completed due to cognitive limitations 16 (2.6) 45.5 (8.4)c <0.001 592 (97.4) 86.1 (15.3)c ≥ one ACASI completed Abbreviations: ACASI, Audio computer-assisted self-interview. a Full scale IQ score from Wechsler Intelligence Scale for Children, Fourth Edition (WISC-IV). b From t-test. c Due to missing WISC-IV, N for those without ACASI=12, N for ACASI completed =576. rp Fo Based on the results of the internet use survey and the ACASI review, we expect that the vast majority of eligible AMP Up participants will be able to complete the online surveys ee independently. However, as we describe below, we have incorporated accommodations for those unable to do so. AMP Up study design ev rr AMP Up is a prospective cohort study which conducts yearly online data collection for the ie majority of self-reported information, annual medical chart abstraction and STI specimen w collection, and three in-person clinic visits at Entry, Year 3, and Year 6. Individual participants on will be followed for a minimum of 6 years. The study is currently recruiting, with 305 individuals enrolled thus far. Study population and inclusion criteria ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 10 of 29 The eligible study population for AMP Up includes all PHIV+ and PHEU young adults 18 years of age and older previously followed in AMP (including those lost to follow-up in AMP), along with other PHIV+ young adults with available lifetime history of ARV use, CD4 and HIV-1 RNA, and major medical diagnoses. Perinatal HIV status must be documented in the patient’s 10 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 11 of 29 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open w ie ev rr ee rp Fo 1 2 3 medical chart. All eligible participants are recruited from one of 14 clinical research sites across 4 5 the US including Puerto Rico. Enrollment opened in April 2014 to former AMP participants and 6 7 8 in May 2015 to other PHIV+ individuals previously involved in non-PHACS research protocols 9 10 at the clinical research sites. The targeted enrollment goal is 600 PHIV+ and 250 PHEU young 11 12 adults. 13 14 15 Evaluations and data collection methods 16 17 18 The AMP Up protocol is measuring outcomes from a wide range of domains, including: 19 20 transition to adult clinical care; employment and educational achievement; retention in health 21 22 care; HIV end-organ disease outcomes (renal, hepatic, cardiac, pulmonary, and peripheral and 23 24 25 central nervous system) and HIV-associated malignancies; metabolic complications 26 27 (dyslipidemia, hypertension, insulin resistance, hyperlactatemia, excess adiposity and fat 28 29 redistribution); sexually transmitted infections; reproductive health; mental health and 30 31 32 neurocognitive functioning; adherence to antiretroviral treatment (ART); sexual behavior and 33 34 substance use; and hearing and language impairments. The frequency of outcome and covariate 35 36 37 measurement and data collection methods are summarized in Table 3, and then the specific 38 39 information obtained with each method of data collection is described in detail. 40 41 42 43 44 45 Table 3. Schedule of Evaluations for the PHACS AMP Up Study 46 47 Study Visit Data Collection Assessment 48 49 Method 50 51 Entry Yr 1 Yr 2 Yr 3 Yr 4 Yr 5 Yr 6 52 53 (In(In(In54 clinic) clinic) clinic) 55 56 57 Demographic and Psychosocial Factors 58 59 11 60 ly on For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open Education, employment, housing Online survey √ √ √ √ √ √ √ Health care utilization, transition to adult clinical care Online survey √ √ √ √ √ √ √ Social support, friendships, self-efficacy Online evaluation √ Quality of life Online survey √ Physical activity Online evaluation √ rp Fo Nutrition √ √ √ √ √ √ √ √ √ √ Online survey √ √ √ √ √ √ Medical and Neuropsychological Factors Diagnoses1 Chart abstraction √ √ √ √ √ √ √ Chart abstraction √ √ √ √ √ √ √ √ √ √ √ √ √ Medications rr ee Height, weight, blood pressure1 Chart abstraction √ Body measurements Clinic visit √ Reproductive health Online survey Neurocognitive functioning Online evaluation Mental health: depression screen Interview Mental health: psychiatric diagnoses Interview Hearing Online evaluation √ Language Interview √ Labs done for clinical care Chart abstraction √ Laboratory biomarkers2 Clinic visit √ Sexually transmitted infections Self-collection √ Repository samples3 Clinic visit √ ev √ √ √ √ w √ √ √ ie √ √ √ √ √ √ √ √ √ √ √ √ ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 12 of 29 √ √ √ √ √ √ √ √ √ √ √ √ √ √ √ √ Behavioral Factors 12 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 13 of 29 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open w ie ev rr ee rp Fo 1 2 3 √ √ √ √ √ √ √ Online survey 4 Sexual behavior 5 6 Substance use √ √ √ √ √ √ √ Online survey 7 8 √ √ √ √ √ √ √ ART adherence Online survey 9 1 10 Pregnancies, fractures, hearing problems, height and weight are also self-reported in annual online surveys. 11 2 Venous lactate/pyruvate, renal biomarkers, cardiac biomarkers, fasting lipids, glucose, insulin. 12 3 13 Serum & plasma (EDTA & heparin), PBMC, throat wash/gargle, saliva, urine, vaginal swab. 14 15 16 17 Data Collection Methods. 18 19 20 Medical chart abstraction. 21 22 23 Medical and neuropsychological diagnoses, ARVs and other medications, reproductive history, 24 25 26 laboratory measures, height, weight and blood pressure are abstracted from participants’ medical 27 28 records. 29 30 31 In-person clinic visits. 32 33 34 Physical examinations, laboratory tests, interviewer-administered mental health evaluations 35 36 (Client Diagnosis Questionnaire [CDQ];(35) Centers for Epidemiologic Studies Short 37 38 Depression Scale [CES-D 10] (36)) and collection of repository storage specimens (blood, saliva, 39 40 41 urine, vaginal swabs) are conducted. Cognitive function, hearing, emotional health and 42 43 friendship are assessed via the online NIH Toolbox(37) and language is assessed with the 44 45 46 interview-administered Clinical Evaluation of Language Fundamentals-4th edition (CELF).(38) 47 48 Physical activity is evaluated with the online Block Physical Activity Screener.(39) 49 50 51 Self-collection of sexually transmitted infection (STI) specimens. 52 53 For participants without Neisseria gonorrhoeae and Chlamydia trachomatis testing results 54 55 available in medical records during the 12 months prior to a study visit, urine and vaginal swabs 56 57 58 59 13 60 ly on For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open are self-collected for STI testing at the local clinical laboratory. Additional urine and swab samples are taken and sent to repository for further STI testing at a central research laboratory. At in-person clinic visits, samples are self-collected at the clinic and at other time points are selfcollected either at the clinic or at home. Online survey. rp Fo The AMP Up online survey consists of a series of short modules with questions on the following topics: employment/education/housing, health care, quality of life, sexual behaviors, reproductive health, substance use, nutrition, and for PHIV+ participants, adherence to ART and transition to adult clinical care. The survey also includes an acceptability question asking if ee participants would prefer to take the survey at home, in the clinic, or elsewhere, and a test rr question to assess how closely participants read the survey instructions. The survey ends with optional questions to assess participants’ acceptability of the instrument. ev Input from members of the PHACS Young Adult Community Advisory Board (YACAB) ie emphasized strong preference for short surveys that did not repeat questions that were answered w in earlier surveys. We therefore developed surveys that can be completed at one or multiple sittings. Skip patterns are embedded within and also between surveys completed at different time on points, allowing follow-up surveys to be tailored to each participant based on their responses to previous surveys. ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 14 of 29 Participants can opt to complete surveys at their study clinic or offsite. For individuals with cognitive limitations who cannot respond to survey questions on their own, we developed a shorter online instrument consisting of a subset of the modules (employment/education/housing, health care utilization, medication adherence, and transition to adult HIV care) that can be completed by their caregiver. Alternatively, participants who can respond on their own but 14 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 15 of 29 BMJ Open cannot self-administer the online instrument can complete a similar, interviewer-administered online survey that also includes the quality of life module. While study clinics contact participants each year on the anniversary of their entry visit to remind them to complete their surveys, participants are able to complete the surveys at any point prior to the next entry visit anniversary. Upon completion, participants have the choice of a $75 virtual or physical gift card. This remuneration is provided in addition to funds provided by the rp Fo clinical site to compensate for food, travel, or participation in other study activities. The online surveys were piloted by research and clinic staff, YACAB members, and other young adult volunteers from outside of PHACS. Surveys are thoroughly tested prior to ee implementation to ensure the proper placement and function of skip patterns. Responses to the rr surveys are regularly reviewed to allow for modification of potentially unclear questions. Training and implementation ev Given the novelty of internet-based instruments and remote data collection to PHACS staff and ie participants, we created written instructions to guide them through important study processes, w including study registration, specimen sample collection for STI testing, registration and on navigation of the NIH Toolbox, and organization of the Entry visit. The importance of the inperson Entry visit is emphasized in the instructions, as it provides initial administration of the ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com online survey in a familiar setting, and preparation for the Year 1 follow-up visit where the first instance of remote data collection may take place. Research sites’ role in data collection and participant engagement Since staff at the pediatric/adolescent clinics are often an important part of participants’ systems of support, research site staff have emphasized that their relationship with participants should be 15 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open maintained during this potentially turbulent period. The AMP Up protocol was therefore designed with flexibility in terms of the research sites’ role in data collection and participant engagement, allowing participants to determine a comfortable pace by which to transition from clinic-based research visits to remote online data collection. Initially, AMP Up site staff will be integrally involved with all participants through study enrollment and completion of Entry visits. For a certain subgroup of participants, this level of site involvement will continue throughout the rp Fo duration of the protocol due to personal preference or because of lack of internet access or cognitive limitations. However, it is anticipated that the ability and willingness of most young adults to return to the clinic will diminish and eventually end due to competing priorities; ee therefore accommodations have been incorporated to allow for their continued study participation entirely off-site, through chart abstraction, online data collection, and mailed-in specimen collection. ie ev Sample size rr Our targeted sample size of 600 PHIV+ and 250 PHEU young adults will allow us to address w AMP Up’s primary scientific objective of defining the impact of HIV infection and antiretroviral therapy on young adults with perinatal HIV infection as they transition into adulthood. In the on context of this study, we will be measuring many targeted outcomes, some continuous (e.g., ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 16 of 29 neurocognitive functioning defined as full scale IQ score) and some binary (insulin resistance, retention in adult clinical care). For comparisons between PHIV+ and PHEU young adults, continuous outcomes, the target sample size of 600 perinatally-infected versus 250 uninfected participants for the AMP Up study provides 80% power to detect a difference in means for a continuous outcome of 0.211 standard deviations based on a 2-sample t-test (assuming normality holds), and 0.216 based on a non-parametric Wilcoxon rank sum test (for skewed outcomes) at 16 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 17 of 29 alpha = 0.05. For example, if we were comparing the full-scale IQ scores of HIV infected vs. uninfected participants and assumed a standard deviation of 15 points, we could detect a difference of 3.16 points or more in the mean IQs. If we allow for possible loss to follow-up or incomplete/missing assessments of 4% per year for infected and 6% per year for uninfected participants for three years after enrollment into AMP Up is completed, then an adjusted sample size of 530 HIV-infected vs. 208 HIV-uninfected participants provides 80% power to detect a rp Fo difference of 0.229 standard deviations, or 3.44 points in mean IQ scores. Once we adjust for potential confounders, we will typically lose some power so the minimum detectable difference will usually increase. ee For binary outcomes, the minimum detectable odds ratios we can detect based on rr comparing HIV-infected vs. uninfected participants, at 80% power with a 0.05 significance level, ranges from 1.57 to 2.64 depending on underlying rate of the event in the comparison (PHEU) ev cohort, which we have varied in these sample size calculations to be between 4% and 30%. For ie simplicity here, it is assumed that the event rate is higher in the HIV-infected group than the PHEU group. w For comparisons within PHIV+ young adults we may wish, for example, to compare on those PHIV+ young adults who initiated ART before age 5 versus those who initiated ART at a ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open later age. The detectable differences in means relative to the standard deviation that can be detected assuming 530 PHIV+ participants (under an assumption of 4% loss per year) when two subgroups of the PHIV+ participants are being compared ranges from 0.24 to 0.41, depending on the sample percentages in each subgroup. When comparing proportions with events between two subgroups, the minimum detectable odds ratios range from 1.63 to 4.01 depending on the percent in each subgroup. 17 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open Statistical analyses Participants’ baseline characteristics (including demographics and clinical characteristics) will be described using frequencies for categorical variables and means, medians, standard deviations and interquartile range for continuous variables. Incidence estimates for outcomes will be calculated under a Poisson distribution based on participant-years of follow-up. rp Fo When evaluating associations between the many exposures and outcomes of interest in this study, multivariable regression analyses will be conducted adjusting for potential confounding factors. For cross-sectional associations, logistic and linear regression models will be used. Cox proportional hazards models will be used for factors associated with incidence of ee commonly-occurring outcomes, and Poisson regression for incidence of outcomes that are rr observed to occur less frequently. For evaluation of factors associated with changes in outcomes over time, generalized estimating equation (GEE) or mixed effects models will be employed. ev Effect modification of associations by specific covariates will be evaluated by adding interaction ie terms to the multivariable regression models. A probability level of 0.05 will be used for all w analyses. All analyses will be conducted using SAS Version 9.2 (SAS Institute Inc., Cary, NC). ly ETHICS AND DISSEMINATION on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 18 of 29 The AMP Up protocol was approved by the Harvard T.H. Chan School of Public Health’s Institutional Review Board (IRB) as well as the IRBs at the 14 participating sites. Participants provide written informed consent; for cognitively-impaired individuals with legally authorized representatives, legal guardian permission and participant assent is obtained. To protect participant confidentiality, in addition to an anonymized Participant Identifier 18 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 19 of 29 BMJ Open assigned to all PHACS participants, AMP Up participants are assigned a Personal Identification Number and Keyword to enter and submit online survey data. Written instructions were also developed for participants to provide steps to maintain their privacy when participating in webbased research. DatStat,(40) which hosts the AMP Up online surveys, maintains stringent levels of encryption and data storage that exceed both industry standards for Internet security and IRB standards for the protection of research participants and electronic records. DatStat’s technology rp Fo platform, including servers, databases, and web presences, employ multiple layers of security features to protect research participants and their data. Dissemination ee The findings from this study will be disseminated through peer-reviewed journals, national and rr international conference presentations, and to study participants through participant summaries that are presented in YACAB newsletters and in a recently-developed participant website. ie DISCUSSION ev Many PHACS participants have a strong connection with their clinical research site, as expressed w by YACAB members and site staff. This connection may minimize the participation and on retention issues experienced by other epidemiologic studies recruiting and following participants entirely online.(41) The long-term success of AMP Up will be tested as more participants ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com relocate, attend college, transfer their clinical care to adult clinics (a process typically completed by age 25), or take on work and family responsibilities that preclude them from completing study assessments in the clinic at which they enrolled in AMP Up. While our initial success may hinge upon the strong connections participants have with their sites, in order to successfully transition them to remote visits we will need to encourage direct connections between participants and the PHACS study itself. For this reason we are taking steps to strengthen the association AMP Up 19 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open participants have with PHACS. This began with the involvement of AMP participants in the development of AMP Up, and has continued with the development of the YACAB and of the participant website, through which participants link to their online surveys, access information on health, education and housing opportunities, and connect with other study members. Given it will be important for the majority of AMP participants to successfully enroll into AMP Up as they reach 18 years of age, we are beginning to examine enrollment trends and reasons for rp Fo not enrolling. Additional challenges in recruitment and study retention will arise when AMP Up opens enrollment to PHIV+ young adults not previously involved in research protocols at our research clinics. We are exploring methods to offer web-based informed consent forms, ee enrollment and medical record release authorizations for these potential participants. The close rr connection our participants experience with their clinic sites also emphasizes an important limitation of our study. Since we are enrolling young adults through these clinical sites, our ev participants may be more likely to be adherent to clinical care and supportive services; young ie adults who are non-adherent or lost to care may not be well-represented in our cohort. w In some aspects the first generation of perinatally HIV-infected youth is unique. Many of these young people were born before the advent of effective antiretroviral therapy and were not on expected to live past childhood. This expectation may have profound consequences for their ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 20 of 29 transition into young adulthood, a transition which is of particular research interest both domestically and internationally. To potentiate the opportunity to collaboratively study transition, we have shared the AMP Up protocol and online survey instrument with other, global networks whose aims include an examination of the transition into adult clinical care for young people infected with HIV, including the International Epidemiologic Databases to Evaluate AIDS (IeDEA) (42) and EuroCoord.(43) The design of AMP Up, which allows flexibility in the 20 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 21 of 29 BMJ Open transition from in-person to remote data collection, can also enhance long-term research possibilities for a broader set of studies. Investigations undertaking long-term follow-up of young adults with chronic conditions, including birth or early childhood cohorts, or more generally, any epidemiologic studies for which long-term success is contingent upon the ability to retain participants’ interest and long-term commitment, can potentially benefit from adopting this study design. w ie ev rr ee rp Fo ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com 21 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open Author contributions: Author KT was integrally involved in conception and design of the protocol and drafting of the manuscript; authors GS, RVD, RH and SA were integrally involved in conception and design of the protocol, reviewed the manuscript and provided revisions; author KP was involved in design of the protocol and provided critical input on content and organization of the paper; author JA was involved in design and implementation of the protocol, wrote segments of the manuscript’s Methods section and provided critical feedback on the rp Fo manuscript in full; authors KC, SS, MM, AE, CB and DK were involved in development of one or more of the protocol’s data collection instruments, reviewed the manuscript and provided important revisions; authors JB and DS provided important insight as to the structure and content ee of the online survey instrument, reviewed and revised the manuscript, and authors EB and AP participate in data acquisition and reviewed and revised the manuscript. rr Funding: The Pediatric HIV/AIDS Cohort Study (PHACS) was supported by the Eunice ev Kennedy Shriver National Institute of Child Health and Human Development with co-funding ie from the National Institute on Drug Abuse, the National Institute of Allergy and Infectious w Diseases, the Office of AIDS Research, the National Institute of Mental Health, the National Institute of Neurological Disorders and Stroke, the National Institute on Deafness and Other on Communication Disorders, the National Heart Lung and Blood Institute, the National Institute of Dental and Craniofacial Research, and the National Institute on Alcohol Abuse and Alcoholism, ly 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 22 of 29 through cooperative agreements with the Harvard T.H. Chan School of Public Health (HD052102) and the Tulane University School of Medicine (HD052104). Note: The conclusions and opinions expressed in this article are those of the authors and do not necessarily reflect those of the National Institutes of Health or U.S. Department of Health and Human Services. 22 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Page 23 of 29 BMJ Open Acknowledgements: We thank the children and families for their participation in PHACS, and the individuals and institutions involved in the conduct of PHACS. The study was supported by the Eunice Kennedy Shriver National Institute of Child Health and Human Development with co-funding from the rp Fo National Institute on Drug Abuse, the National Institute of Allergy and Infectious Diseases, the Office of AIDS Research, the National Institute of Mental Health, the National Institute of Neurological Disorders and Stroke, the National Institute on Deafness and Other Communication Disorders, the National Heart Lung and Blood Institute, the National Institute of Dental and ee Craniofacial Research, and the National Institute on Alcohol Abuse and Alcoholism, through rr cooperative agreements with the Harvard T.H. Chan School of Public Health (HD052102) (Principal Investigator: George Seage; Project Director: Julie Alperen) and the Tulane University ev School of Medicine (HD052104) (Principal Investigator: Russell Van Dyke; Co-Principal ie Investigators: Kenneth Rich, Ellen Chadwick; Project Director: Patrick Davis). Data w management services were provided by Frontier Science and Technology Research Foundation (PI: Suzanne Siminski), and regulatory services and logistical support were provided by Westat, Inc (PI: Julie Davidson). ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com The following institutions, clinical site investigators and staff participated in conducting PHACS AMP and AMP Up in 2015, in alphabetical order: Ann & Robert H. Lurie Children’s Hospital of Chicago: Ram Yogev, Margaret Ann Sanders, Kathleen Malee, Scott Hunter; Baylor College of Medicine: William Shearer, Mary Paul, Norma Cooper, Lynnette Harris; Bronx Lebanon Hospital Center: Murli Purswani, Mahboobullah Baig, Anna Cintron; 23 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open Children's Diagnostic & Treatment Center: Ana Puga, Sandra Navarro, Patricia Garvie, James Blood; Children’s Hospital, Boston: Sandra Burchett, Nancy Karthas, Betsy Kammerer; Jacobi Medical Center: Andrew Wiznia, Marlene Burey, Molly Nozyce; Rutgers - New Jersey Medical School: Arry Dieudonne, Linda Bettica, Susan Adubato; St. Christopher’s Hospital for Children: Janet Chen, Maria Garcia Bulkley, Latreaca Ivey, Mitzie Grant; St. Jude Children's Research Hospital: Katherine Knapp, Kim Allison, Megan Wilkins; San Juan rp Fo Hospital/Department of Pediatrics: Midnela Acevedo-Flores, Heida Rios, Vivian Olivera; Tulane University Health Sciences Center: Margarita Silio, Medea Jones, Patricia Sirois; University of California, San Diego: Stephen Spector, Kim Norris, Sharon Nichols; ee University of Colorado Denver Health Sciences Center: Elizabeth McFarland, Alisa Katai, Jennifer Dunn, Suzanne Paul; University of Miami: Gwendolyn Scott, Patricia Bryan, Elizabeth Willen. Conflicts of Interests: None reported. w ie ev rr ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Page 24 of 29 24 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Page 25 of 29 References: 1. Jacobson DL, Patel K, Siberry GK, et al. Body fat distribution in perinatally HIV-infected and HIVexposed but uninfected children in the era of highly active antiretroviral therapy: outcomes from the Pediatric HIV/AIDS Cohort Study. Am J Clin Nutr 2011;94(6):1485-95. 2. Malee KM, Tassiopoulos K, Huo Y, et al. Mental health functioning among children and adolescents with perinatal HIV infection and perinatal HIV exposure. AIDS Care 2011;23(12):1533-44. 3. Miller TI, Borkowsky W, DiMeglio LA, et al. Metabolic abnormalities and viral replication are associated with biomarkers of vascular dysfunction in HIV-infected children. HIV Med 2012;13(5):264-75. 4. Patel K, Wang J, Jacobson DL, et al. Aggregate risk of cardiovascular disease among adolescents perinatally infected with the human immunodeficiency virus. Circulation 2014;129(11):1204-12. 5. Purswani M, Patel K, Kopp JB, et al. Tenofovir treatment duration predicts proteinuria in a multiethnic United States Cohort of children and adolescents with perinatal HIV-1 infection. Pediatr Infect Dis J 2013;32(5):495-500. 6. Rice ML, Buchanan AL, Siberry GK, et al. Language impairment in children perinatally infected with HIV compared to children who were HIV-exposed and uninfected. J Dev Behav Pediatr 2012;33(2):112-23. 7. Siberry GK, Patel K, Van Dyke RB, et al. CD4+ lymphocyte-based immunologic outcomes of perinatally HIV-infected children during antiretroviral therapy interruption. J Acquir Immune Defic Syndr 2011;57(3):223-9. 8. Tassiopoulos K, Moscicki AB, Mellins C, et al. Sexual risk behavior among youth with perinatal HIV infection in the United States: predictors and implications for intervention development. Clin Infect Dis 2013;56(2):283-90. 9. Torre P, 3rd, Zeldow B, Hoffman HJ, et al. Hearing loss in perinatally HIV-infected and HIVexposed but uninfected children and adolescents. Pediatr Infect Dis J 2012;31(8):835-41. 10. Van Dyke RB, Patel K, Siberry GK, et al. Antiretroviral treatment of US children with perinatally acquired HIV infection: temporal changes in therapy between 1991 and 2009 and predictors of immunologic and virologic outcomes. J Acquir Immune Defic Syndr 2011;57(2):165-73. 11. Alperen J, Brummel S, Tassiopoulos K, et al. Prevalence of and risk factors for substance use among perinatally human immunodeficiency virus-infected and perinatally exposed but uninfected youth. J Adolesc Health 2014;54(3):341-9. 12. Williams PL, Abzug MJ, Jacobson DL, et al. Pubertal onset in children with perinatal HIV infection in the era of combination antiretroviral treatment. AIDS 2013;27(12):1959-70. 13. Mellins CA, Tassiopoulos K, Malee K, et al. Behavioral health risks in perinatally HIV-exposed youth: co-occurrence of sexual and drug use behavior, mental health problems, and nonadherence to antiretroviral treatment. AIDS Patient Care STDS 2011;25(7):413-22. 14. Geffner ME, Patel K, Miller TL, et al. Factors associated with insulin resistance among children and adolescents perinatally infected with HIV-1 in the pediatric HIV/AIDS cohort study. Horm Res Paediatr 2011;76(6):386-91. 15. Lipshultz SE, Williams PL, Wilkinson JD, et al. Cardiac status of children infected with human immunodeficiency virus who are receiving long-term combination antiretroviral therapy: results from the Adolescent Master Protocol of the Multicenter Pediatric HIV/AIDS Cohort Study. JAMA w ie ev rr ee rp Fo ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open 25 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com BMJ Open Pediatr 2013;167(6):520-7. 16. The Pediatric HIV/AIDS Cohort Study (PHACS). (https://phacsstudy.org/). (Accessed January 2016). 17. DiMeglio LA, Wang J, Siberry GK, et al. Bone mineral density in children and adolescents with perinatal HIV infection. AIDS 2013;27(2):211-20. 18. Sohn AH, Hazra R. The changing epidemiology of the global paediatric HIV epidemic: keeping track of perinatally HIV-infected adolescents. J Int AIDS Soc 2013;16:18555. 19. Mofenson LM, Cotton MF. The challenges of success: adolescents with perinatal HIV infection. J Int AIDS Soc 2013;16:18650. 20. Galea S, Tracy M. Participation rates in epidemiologic studies. Ann Epidemiol 2007;17(9):643-53. 21. Morton LM, Cahill J, Hartge P. Reporting participation in epidemiologic studies: a survey of practice. Am J Epidemiol 2006;163(3):197-203. 22. Callahan ST, Winitzer RF, Keenan P. Transition from pediatric to adult-oriented health care: a challenge for patients with chronic disease. Curr Opin Pediatr 2001;13(4):310-6. 23. Vander Stoep A, Beresford SA, Weiss NS, et al. Community-based study of the transition to adulthood for adolescents with psychiatric disorder. Am J Epidemiol 2000;152(4):352-62. 24. Fair CD, Sullivan K, Dizney R, et al. "It's like losing a part of my family": transition expectations of adolescents living with perinatally acquired HIV and their guardians. AIDS Patient Care STDS 2012;26(7):423-9. 25. Transitioning HIV-infected youth into adult health care. Pediatrics 2013;132(1):192-7. 26. Baer A, Saroiu S, Koutsky LA. Obtaining sensitive data through the Web: an example of design and methods. Epidemiology 2002;13(6):640-5. 27. Smith B, Smith TC, Gray GC, et al. When epidemiology meets the Internet: Web-based surveys in the Millennium Cohort Study. Am J Epidemiol 2007;166(11):1345-54. 28. Weisel CP, Weiss SH, Tasslimi A, et al. Development of a Web-based questionnaire to collect exposure and symptom data in children and adolescents with asthma. Ann Allergy Asthma Immunol 2008;100(2):112-9. 29. Huntington A, Gilmour J, Schluter P, et al. The Internet as a research site: establishment of a web-based longitudinal study of the nursing and midwifery workforce in three countries. J Adv Nurs 2009;65(6):1309-17. 30. Huybrechts KF, Mikkelsen EM, Christensen T, et al. A successful implementation of eepidemiology: the Danish pregnancy planning study 'Snart-Gravid'. Eur J Epidemiol 2010;25(5):297-304. 31. van Gelder MM, Bretveld RW, Roeleveld N. Web-based questionnaires: the future in epidemiology? 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Aidala A, Havens J, Mellins CA, et al. Development and validation of the Client Diagnostic Questionnaire (CDQ): A mental health screening tool for use in HIV/AIDS service settings. Psychol Health Med 2004;9:362-80. 36. Zhang W, O'Brien N, Forrest JI, et al. Validating a shortened depression scale (10 item CES-D) among HIV-positive people in British Columbia, Canada. PLoS One 2012;7(7):e40793. 37. Gershon RC, Wagster MV, Hendrie HC, et al. NIH toolbox for assessment of neurological and behavioral function. Neurology 2013;80(11 Suppl 3):S2-6. 38. Semel E, Wiig E, Secord W. Clinical evaluation of language fundamentals-4th edition. San Antonio, TX: The Psychological Corporation 2003. 39. NutritionQuest. Block Physical Activity Screener - Adults. (https://nutritionquest.com/assessment/list-of-questionnaires-and-screeners/). (Accessed September 2015). 40. DatStat. DatStat. (http://www.datstat.com). (Accessed January 2016). 41. Bajardi P, Paolotti D, Vespignani A, et al. Association between recruitment methods and attrition in Internet-based studies. PLoS One 2014;9(12):e114925. 42. International Epidemiologic Databases to Evaluate AIDS (IeDEA). (http://www.iedea.org/). (Accessed January 2016). 43. Enhancing clinical and epidemiological HIV research in Europe through cohort collaboration (EuroCoord). (http://www.eurocoord.net/). (Accessed January 2016). w ie ev rr ee rp Fo ly on 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 BMJ Open 27 For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml BMJ Open STROBE 2007 (v4) Statement—Checklist of items that should be included in reports of cohort studies PHACS AMP Up Protocol Section/Topic Title and abstract Item # 1 Fo Recommendation Reported on page # (a) Indicate the study’s design with a commonly used term in the title or the abstract 2 rp (b) Provide in the abstract an informative and balanced summary of what was done and what was found Introduction ee Background/rationale 2 Explain the scientific background and rationale for the investigation being reported Objectives 3 State specific objectives, including any prespecified hypotheses Study design 4 Present key elements of study design early in the paper Setting 5 Describe the setting, locations, and relevant dates, including periods of recruitment, exposure, follow-up, and data Participants 6 (a) Give the eligibility criteria, and the sources and methods of selection of participants. Describe methods of follow-up Methods rr 5-6 6 9-10 ev collection 2 iew 9 9-10 (b) For matched studies, give matching criteria and number of exposed and unexposed Variables 7 Clearly define all outcomes, exposures, predictors, potential confounders, and effect modifiers. Give diagnostic criteria, if applicable 10-13 Data sources/ measurement 8* For each variable of interest, give sources of data and details of methods of assessment (measurement). Describe comparability of assessment methods if there is more than one group 10-13 Bias 9 Describe any efforts to address potential sources of bias 18-19 Study size 10 Explain how the study size was arrived at Quantitative variables 11 Explain how quantitative variables were handled in the analyses. If applicable, describe which groupings were chosen and on ly 15 why Statistical methods 12 (a) Describe all statistical methods, including those used to control for confounding (b) Describe any methods used to examine subgroups and interactions (c) Explain how missing data were addressed (d) If applicable, explain how loss to follow-up was addressed (e) Describe any sensitivity analyses For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml 16-17 Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 Page 28 of 29 Page 29 of 29 Results Participants 13* (a) Report numbers of individuals at each stage of study—eg numbers potentially eligible, examined for eligibility, confirmed eligible, included in the study, completing follow-up, and analysed (b) Give reasons for non-participation at each stage Fo (c) Consider use of a flow diagram Descriptive data 14* (a) Give characteristics of study participants (eg demographic, clinical, social) and information on exposures and potential confounders 9-13 rp (b) Indicate number of participants with missing data for each variable of interest (c) Summarise follow-up time (eg, average and total amount) ee Outcome data 15* Report numbers of outcome events or summary measures over time Main results 16 (a) Give unadjusted estimates and, if applicable, confounder-adjusted estimates and their precision (eg, 95% confidence rr interval). Make clear which confounders were adjusted for and why they were included (b) Report category boundaries when continuous variables were categorized ev (c) If relevant, consider translating estimates of relative risk into absolute risk for a meaningful time period Other analyses 17 Report other analyses done—eg analyses of subgroups and interactions, and sensitivity analyses 18 Summarise key results with reference to study objectives Interpretation 20 Give a cautious overall interpretation of results considering objectives, limitations, multiplicity of analyses, results from Generalisability 21 Discuss the generalisability (external validity) of the study results 22 Give the source of funding and the role of the funders for the present study and, if applicable, for the original study on Discussion Key results Limitations similar studies, and other relevant evidence Other information Funding which the present article is based iew on ly 20 *Give information separately for cases and controls in case-control studies and, if applicable, for exposed and unexposed groups in cohort and cross-sectional studies. Note: An Explanation and Elaboration article discusses each checklist item and gives methodological background and published examples of transparent reporting. The STROBE checklist is best used in conjunction with this article (freely available on the Web sites of PLoS Medicine at http://www.plosmedicine.org/, Annals of Internal Medicine at http://www.annals.org/, and Epidemiology at http://www.epidem.com/). Information on the STROBE Initiative is available at www.strobe-statement.org. For peer review only - http://bmjopen.bmj.com/site/about/guidelines.xhtml Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 BMJ Open Downloaded from http://bmjopen.bmj.com/ on October 23, 2016 - Published by group.bmj.com Following young people with perinatal HIV infection from adolescence into adulthood: the protocol for PHACS AMP Up, a prospective cohort study Katherine Tassiopoulos, Kunjal Patel, Julie Alperen, Deborah Kacanek, Angela Ellis, Claire Berman, Susannah M Allison, Rohan Hazra, Emily Barr, Krystal Cantos, Suzanne Siminski, Michael Massagli, Jose Bauermeister, Danish Q Siddiqui, Ana Puga, Russell Van Dyke and George R Seage III BMJ Open 2016 6: doi: 10.1136/bmjopen-2016-011396 Updated information and services can be found at: http://bmjopen.bmj.com/content/6/6/e011396 These include: References This article cites 34 articles, 8 of which you can access for free at: http://bmjopen.bmj.com/content/6/6/e011396#BIBL Open Access This is an Open Access article distributed in accordance with the Creative Commons Attribution Non Commercial (CC BY-NC 4.0) license, which permits others to distribute, remix, adapt, build upon this work non-commercially, and license their derivative works on different terms, provided the original work is properly cited and the use is non-commercial. 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