LabMedica -Vol. 30 No.4• 6-7
Transcription
LabMedica -Vol. 30 No.4• 6-7
V I S I T W O R L D ’ S C L I N I C A L L A B O R AT O RY N E W S L E A D E R ISSN 1068-1760 Vol. 30 No. 4 • 6-7/ 2013 Diagnostic Blood Test for Fibromyalgia Developed C ytokine-producing activity of immune cells of fibromyalgia (FM) patients has led to the development of a commercial blood test. The very real biological condition of FM takes an average of three to five years for someone with the illness to get an accurate diagnosis as hitherto there was no diagnostic Noninvasive Prenatal Test Screens Blood for Chromosomal Abnormalities P hysicians will have access to a new noninvasive prenatal test, which uses cell-free fetal DNA in circulating maternal blood. The test, called Panorama, uses cell-free fetal DNA in circulating maternal blood to screen for chromosomal abnormalities associated with trisomy 21 (Down syndrome), novel molecular diagnostic platform with high sensitivity and specificity has been developed for the early detection of the Chikungunya virus (CHIKV). Chikungunya has reemerged as an important arboviral infection of global health significance and because of lack of a vaccine and Cont’d on page 33 Cont’d on page 8 Image: Courtesy of Georgetown University Hospital A cutting-edge technology has been developed that can successfully screen human blood for disease markers that may hold the key to better diagnosing and understanding of puzzling health conditions, including autoimmune diseases. The technology accurately identified human blood markers for blood test that tracks fragments of DNA shed by dying tumor cells could be used to monitor how well patients are responding to cancer treatment, as well as provide a non-invasive alternative to biopsies in advanced breast cancer. A Cont’d on page 4 INSIDE Image: A cluster of breast cancer cells showing visual evidence of programmed cell death See article on page 13 S I T LINKXPRESS COM R E A D E R S E R V I C E ® P O R T A L Renew /Start your Free Subscription Access Interactive Digital Magazine Instant Online Product Information: LinkXpress codes of 1 Identify interest as you read magazine ® on LinkXpress.com 2 Click to reach reader service portal code(s) of interest on 3 Mark LinkXpress inquiry matrix ® If your subscription is not renewed every 12 months your Free Subscription may be automatically discontinued A Process Offers Potential for New Biomarkers Blood Test Tracks Response to Cancer Treatment I Rapid Molecular Test for Chikungunya Virus trisomy 18 (Edwards syndrome), trisomy 13 (Patau syndrome) and monosomy X (Turner syndrome). Panorama can be used as early as the ninth week of pregnancy. In December 2012, the American Congress of Obstetricians and Gynecologists (ACOG) issued a medical opinion stating that cell-free fetal Cont’d on page 6 V DAILY CLINICAL LAB NEWS Fully-Automated von Willebrand Factor Assay Panel Released he HemosIL AcuStar VWF assay panel offers the first fully-automated chemiluminescent system to use recombinant technology, allowing greater precision than platelet-based tests. T Clinical News . . . . . . . 4-60 IFCC News . . . . . . . . . . . 61 EFLM Corner . . . . . . . . . .66 Product News . . . . . 22-46 Technical Literature 58, 60 Industry News . . . . . . . . .68 International Calendar . 69 PUBLISHED IN COOPERATION WITH See article on page 4 Prostate Cancer Test Closer to Clinical Trial A Novel Biomarker Detects Deadly Lymphoma A breakthrough urine biomarker for prostate cancer will soon be available which will signal a significant step forward in the battle against prostate cancer. A protein called Engrailed-2 (EN2) is made by prostate cancers and secreted into urine where it can easily be detected in a small urine sample novel diagnostic test accurately identifies patients who have a new type of deadly intestinal lymphoma that is particularly common in Asia. The test will have an immediate impact on patient care, with doctors now able to diagnose patients accurately and tailor more effective treatment Cont’d on page 4 Cont’d on page 8 International Federation of Clinical Chemistry and Laboratory Medicine GLOBETECH >>> M E D I A <<< Scan with Smartphone to Access Latest News LINKXPRESS COM LMI-07-13 102 LINKXPRESS COM LMI-07-13 103 LabMedica Process Offers Potential for New Biomarkers cont’d from cover neuromyelitis optica (NMO), a rare autoimmune disorder resembling multiple sclerosis that can result in blindness and paralysis, by substituting antibodybinding targets with biologically unnatural molecules called peptoids. Scientists at Scripps Research Institute (Jupiter, FL, USA; www.scripps.edu) identified several peptoids that bound exclusively to antibodies in NMO patient blood serum and not healthy patients or patients with similar diseases, including multiple sclerosis (MS), lupus, Alzheimer’s disease (AD) and narcolepsy. At least one of the peptoids bound to an antibody that is well known to be associated with NMO. The team used the chemical library screening technology to identify a synthetic peptoid that binds anti-Aquaporin 4 (AQP4) antibodies in the serum of NMO patients. After processing the serum, slides were scanned on a GenePix 4200AL microarray scanner (Molecular Devices; Sunnyvale, CA, USA; www.moleculardevices.com) by using the 488/635 nm laser at 100% power and a 500-photomultiplier-tube gain. The investigators screened 100,000 peptoids using a second-generation bead-based screening approach that yielded several peptoid ligands for the antigenbinding site of anti-AQP4 antibodies. They showed in a small preliminary study that the use of a small panel of these peptoids allows one to distinguish between NMO patient serum and serum from healthy controls or patients with MS, AD, narcolepsy, and lupus with high accuracy. Thomas Kodadek, PhD, the senior author of the study, said, “We find disease biomarkers differently than anyone else. This enables new disease biomarker detection. Additionally, by using these peptoid hits to ‘fish’ for disease-specific antibodies, the system enables disease-specific antibody detection without first knowing the antibodies’ natural binding targets.” The study was published on March 21, 2013, in the journal Chemistry & Biology. Fully-Automated von Willebrand Factor Assay Panel Released fully automated von Willebrand Factor assay has been released in Europe and international territories as a European CE in vitro diagnostic (IVD) Mark product under the European Directive on in vitro Diagnostic Medical Devices but not currently [US FDA] 510(k) cleared. A product of Instrumentation Laboratories (Bedford, MA, USA; www.instrumentationlaboratory. com/ilww), the fully automated HemosIL AcuStar VWF assay panel, designed exclusively for use on the ACL AcuStar Hemostasis Testing System, includes HemosIL AcuStar VWF Antigen (VWF:Ag) and HemosIL AcuStar VWF Ristocetin Cofactor (VWF:RCo) Activity assays. HemosIL AcuStar VWF:RCo is the first fully automated, chemiluminescent assay to use recombinant technology, allowing full automation and greater precision than platelet-based tests. It meets guidelines on VDF investigation and enhances accuracy versus manual methods. Chemiluminescence offers an enhanced linearity range to quantify extremely low levels of VWF concentrations. Like all reagents on the ACL AcuStar System, HemosIL AcuStar VWF assays are ready-to-use, cartridge-based and offer results in 30 minutes – ondemand, 24/7. This is the third specialty assay panel A commercialized on the ACL AcuStar system. Previously introduced panels include Antiphospholipid Syndrome and Heparin-Induced Thrombocytopenia. “With the ACL AcuStar Hemostasis Testing System, our goal is to automate complex assays and offer enhanced efficiency and sensitivity where it matters most,” said Remo Tazzi, Director of Hemostasis Marketing at IL. “Our new HemosIL AcuStar VWF assays achieve this, allowing clinicians to make quicker and more effective patient care decisions.” VDF is an acquired or inherited bleeding disorder, caused by a qualitative or quantitative defect of the VWF protein. Whereas hemophilia mainly affects males, VDF is not gender-specific. The disease affects over 1% of the worldwide population and occurs in 1/100–100,000 people with hemophilia. Acquired VDF can be associated with serious autoimmune problems (e.g., rheumatoid arthritis, systemic lupus erythematosus, and specific types of kidney failure or cancers) and may develop with no underlying conditions. Certain kinds of VDF may remain undiagnosed because symptoms can be mild. Prompt diagnosis and classification are necessary for optimal therapeutic management. Prostate Cancer Test Closer to Clinical Trial cont’d from cover from men, allowing faster testing that could save lives and offer the potential for huge cost savings. The University of Surrey (Guildford, UK; www.surrey.ac.uk) where the test was originally developed has signed a worldwide nonexclusive agreement with international diagnostic specialist Zeus Scientific (Raritan, NJ, USA; www.zeusscientific.com) to develop and market its breakthrough urine biomarker, EN2. Urinary EN2 levels can be measured by an enzyme-linked immunosorbent assay and higher EN2 levels correlated with the stage of the tumor. In a joint statement, the University and the Prostate Project Charity (Godalming, UK; www.prostate-project. org.uk) who jointly funded the research, said: “This is the news we have all been waiting for. In two years of extensive trials in the USA and Europe, EN2 has consis- tently outperformed the 30-year-old prostate-specific antigen (PSA) test proving itself to be twice as effective at finding prostate cancer. Its accuracy has never been in doubt, but it has proved difficult to bulk test urine samples using conventional assay technology. Now, Zeus Scientific, one of the leaders in this field is confident it can overcome the problems and bring EN2 to market.” Hardev Pandha MD, PhD, professor of Medical Oncology at the University of Surrey, said, “The University of Surrey is looking forward very much to working with Zeus to introduce EN2 as a novel diagnostic test for prostate and bladder cancers. Our tests have shown that levels of EN2 correlate strongly with disease volume. Knowledge of disease volume may help urologists assess whether the patient has a small volume of disease that may be safely and actively monitored or a larger volume that needs to be treated.” labmedica.com EDITORIAL BOARD Rosa I. Sierra-Amor Mexico Claus Christiansen Denmark Bernard Gouget France Jocelyn M. Hicks United States Anders Kallner Sweden Christopher Price United Kingdom Andreas Rothstein Colombia Dmitry B. Saprygin Russia Gérard Siest France Andrew Wootton United Kingdom A GLOBETECH PUBLICATION Published in cooperation with the International Federation of Clinical Chemistry and Laboratory Medicine (IFCC) and European Federation of Clinical Chemistry and Laboratory Medicine (EFLM). HospiMedica International • HospiMedica en Español • HospiMedica China LabMedica International • LabMedica en Español • LabMedica China Medical Imaging International • Bio Research International • Medimaging.net HospiMedica.com • LabMedica.com • BiotechDaily.com • TradeMed.com Dan Gueron Jill Roberge Jacqueline Miller, PhD Raymond L Jacobson, PhD Gerald Slutzky, PhD Andreas Rothstein Marcela Jensen Joseph Ciprut Brenda Silva Paul Mills Doris Mendieta Dr. Jutta Ciolek Christina Chang Arda Turac Elif Erkan Publisher Editorial Director News Director News Editor News Editor News Editor Assistant Editor Assistant Editor New Products Editor Regional Director Regional Director Regional Director Regional Director Production Director Reader Service Manager HOW TO CONTACT US Subscriptions: Send Press Releases to: Advertising & Ad Material: Other Contacts: www.LinkXpress.com [email protected] [email protected] [email protected] ADVERTISING SALES OFFICES USA P.O.Box 800806, Miami, FL 33280, USA [email protected] Tel: (1) 954-893-0003 GERMANY, SWITZ., AUSTRIA Bad Neustadt, Germany [email protected] Tel: (49) 9771-3528 UK, FRANCE, NORDIC REG. [email protected] Gerrards Cross, UK Tel: (44) 1753-892-791 ITALY [email protected] Genoa, Italy Tel: (39) 10-570-4948 JAPAN [email protected] Tokyo, Japan Tel: (81) 3-5691-3335 CHINA Shenzen, Guangdong, China [email protected] Tel: (86) 755-8375-3877 ALL OTHER COUNTRIES [email protected] Contact USA Office Tel: (1) 954-893-0003 SUBSCRIPTION INFORMATION LabMedica lnternational is published eight times a year and is circuIated worldwide (outside the USA and Canada) without charge and by written request, to clinical laboratory specialists and administrators, and other qualified professionals allied to the field. To all others: Paid Subscription is available for a twoyear subscription charge of US$240. Single copy price is US$20. Mail your paid subscription order accompanied with payment to Globetech Media, P.O.B. 802214, Miami, FL 33280-2214. For change of address or questions on your subscription, write to: LabMedica lnternational, Circulation Services at above address; or visit: www.LinkXpress.com ISSN 1068-1760 Vol.30 No.4. Published, under license, by Globetech Media LLC; Copyright © 2013. All rights reserved. Reproduction in any form is forbidden without express permission. Opinions expressed are solely those of the authors, and do not represent an endorsement, or lack thereof, by the Publisher of any products or services. Teknopress Yayıncılık ve Ticaret Ltd. Şti. adına İmtiyaz Sahibi: M. Geren • Yazı işleri Müdürü: Ersin Köklü Müşir Derviş İbrahim Sok. 5/4, Esentepe, 34394 Şişli, İstanbul, Türkiye Faks: (212) 216-6997 • P. K. 1, AVPIM, 34001 İstanbul Baskı: Promat Web Ofset Tesisi • Sanayi Mahallesi 1673. Sokak No: 34 • 34510 Esenyurt, B. Çekmece • İstanbul, Türkiye Yerel süreli yayındır. Yılda sekiz kere yayınlanır, ücretsiz dağıtılır. LabMedica International June-July/2013 4 VISIT US AT: Booth: 3245 LINKXPRESS COM LMI-07-13 105 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Diagnostic Blood Test Developed for Fibromyalgia cont’d from cover blood test to definitively confirm the disorder. The blood test was developed in conjunction with a study that identified unique immunologic patterns in fibromyalgia patients. Scientists at the University of Illinois at Chicago (UIC; IL USA; www.uic.edu) measured plasma cytokine levels in a group of 110 patients with a diagnosis of FM and determined responses to mitogen challenges of their peripheral blood mononuclear cells (PBMC). The cytokine levels of these patients were then compared with those in a group of 91 matched healthy controls. A custom panel of antibody-conjugated beads for measuring eight human cytokines (BioRad Laboratories; Hercules, CA, USA; www.biorad.com) was used in the assay. The investigators that cytokine levels of stimulated PBMC cultures of healthy control subjects were significantly increased as compared to matched nonstimulated PBMC cultures. In contrast, the concentrations of most cytokines were lower in stimulated samples from patients with FM compared to controls. The FM Test is the first test to objectively diagnose fibromyalgia via a simple blood test, with results usually available in one week or less. The FM Test was developed by EpicGenetics (Santa Monica, CA, USA; www.epicgtx.com), and will cost USD 744. The FM test is a multibiomarkerbased assay, which comprises immune system white blood cell chemokine and cytokine patterns. Patients with fibromyalgia have a significantly dysregulated pattern regarding these proteins. Test results are based upon a 1-100 scoring system, with fibromyalgia patients having scores of 50 and above. The FM Test is more than 93% sensitive and by comparison, the rheumatoid arthritis blood test is only 65% sensitive. Bruce S. Gillis, MD, MPH, the founder of EpicGenetics, said, “The result was the discovery of a major set of differences in cell-mediated immunity in the fibromyalgia group versus the PREMIER MULTIMEDIA PLATFORM SERVING THE WORLDWIDE CLINICAL LABORATORY COMMUNITY Anytime, Anywhere, On the Go... PRINT MAGAZINE INTERACTIVE DIGITAL EDITION WEB PORTAL NEW MOBILE VERSION healthy patient, and this discovery was opposite to what was anticipated. Specifically, while fibromyalgia patients are often considered to be ‘hyper/overactive responders,’ we identified that the fibromyalgia patients had a depressed and dysregulated immune system.” The original study the test was based on was published on December 17, 2012, in the journal BMC Clinical Pathology. Image: The FM test is designed to diagnose fibromyalgia via a simple blood test (Photo courtesy of EpicGenetics). Novel Biomarker Identifies Deadly Lymphoma cont’d from cover strategies to improve prognosis. Clinical scientists at Singapore General Hospital (Singapore; www. singhealth.com.sg) studied 60 patients with suspected epitheliotropic intestinal T-cell lymphoma (EATL Type II) from nine different centers from 1999 to 2012. The median age at presentation was 58 years (range: 23 to 83 years) with male predominance (male–female ratio 2.6:1). The disease, almost unheard of before 2008, has been classified as an alternative type of enteropathy-associated T-cell lymphoma (EATL Type I), a disease common in Caucasians and associated with celiac disease. Immunohistochemical analysis of paraffin-embedded tumor sections was performed with a variety of antibodies using the BONDMAX automated staining machine (Leica Microsystems; Wetzlar, Germany; www.leica-microsystems.com). Interphase fluorescence in situ hybridization (FISH) was performed using the C-MYC break-apart and chromosome 8 centromeric probes (Abbott Laboratories; Abbott Park, IL, USA; www.abbott.com) and FISH ancillary kit (DAKO A/S; Glostrup, Denmark; www.dako.com). The team has identified a novel biomarker, known as megakaryocyte-associated tyrosine kinase (MATK), and developed a diagnostic test that enables clinicians to diagnose accurately patients suffering from this type of lymphoma. Requests for this test have come in from around the world, including China and the USA. The disease was characterized by extensive nuclear expression of MATK in 87% and in 88% there was usually a CD8+ CD56+ cytotoxic phenotype, there was frequent aberrant expression of CD20 in 24%. Lim Soon Thye, MD, a consultant oncologist and senior author, said, “Our investigation has an immediate impact on the care we can provide to patients with this rare but very aggressive intestinal lymphoma. With an accurate diagnosis, we can treat our patients better and improve overall survival.” The study was published on March 12, 2013, in the journal Leukemia. LabMedica International June-July/2013 6 VISIT US AT: Booth: 3015 LINKXPRESS .COM LINKXPRESS .COM LMI-07-13 254 LINKXPRESS .COM LMI-07-13 260 LINKXPRESS .COM LMI-07-13 261 LINKXPRESS .COM LMI-07-13 262 LMI-07-13 253 LINKXPRESS .COM LMI-07-13 255 LMI-07-13 251 LINKXPRESS .COM LINKXPRESS .COM LMI-07-13 259 LMI-07-13 250 LINKXPRESS .COM LINKXPRESS .COM LINKXPRESS .COM LMI-07-13 256 LMI-07-13 252 LINKXPRESS .COM LMI-07-13 257 LINKXPRESS COM LINKXPRESS .COM LMI-07-13 107 LMI-07-13 258 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Molecular Test Rapidly Detects Chikungunya Virus cont’d from cover effective treatment, rapid diagnosis plays an important role in early clinical management of patients. Scientists at the National University of Singapore (Singapore; www.nus.edu.sg) collected a total of 42 serum samples from 22 CHIKVinfected patients and 20 from uninfected individuals, to evaluate the clinical sensitivity and specificity of the developed test. All of the serum samples were validated using a real-time reverse transcriptase polymerase chain reaction (RT-PCR) detection assay targeting the CHIKV envelope glycoprotein1 gene. The molecular test uses 2,7-diamino-1,8-naphthyridine derivative (DANP)-labeled cytosinebulge hairpin primers to amplify the nsP2 region of the CHIKV genome, followed by measurement of the fluorescence emitted from DANP-primer complexes after PCR. RT-PCR was performed LINKXPRESS COM using the C1000 thermal cycler (Bio-Rad; Hercules, CA, USA; www.bio-rad.com). Samples were assayed after optimization with CHIKV genomic RNA using AccessQuick Reverse Transcription-PCR kit (Promega; Madison, WI, USA; www.promega.com). The detection limit of the assay was 0.01 plaque-forming units per reaction of CHIKV. The primers were highly specific in detecting CHIKV, without any cross-reactivity with the panel of RNA viruses validated in the study. The feasibility of the DANP-coupled hairpin RT-PCR for clinical diagnosis was evaluated using clinical serum samples from CHIKV-infected patients, and the specificity was 100% and the sensitivity was 95.5%. The authors concluded that the novel DANPcoupled hairpin RT-PCR technology is a simple, rapid, and cost effective detection method for CHIKV. The results from a patient sample evalua- LMI-07-13 108 tion have indicated high clinical sensitivity and specificity of this method. The method can be a useful tool for rapid detection of CHIKV during outbreaks or as a point-of-care molecular assay for acute-phase patient serum samples in many parts of the world. The study was published in the March 2013 issue of the Journal of Molecular Diagnostics. Molecular Diagnostic Alliance to Target Developing World T wo companies are collaborating to develop novel molecular diagnostics (MoDx) for autoimmune, cancer, and infectious diseases, among others. Seegene (Seoul, Korea; www.seegene.com) and Selventa (Cambridge, MA, USA; www.selventa.com) together are developing MoDx for underserved diagnostic markets including autoimmune, cancer, and infectious diseases. The synergistic combination of Selventa’s Systems Diagnostics (SysDx) multi-omic analytics platform and Seegene’s TOCE and DPO multiplex polymerase chain reaction (PCR) technology should result in new MoDx that accelerate the adoption of personalized medicine in major classes of disease. SysDx analyzes a holistic range of a patient’s molecular information (e.g., genomic, epigenomic, transcriptomic, proteomic, metabolomic, and electronic medical record information) to identify a panel of “multi-omic” biomarkers that can accurately diagnose a patient’s disease and response or nonresponse to a specific therapy. By leveraging multiplexing technology, SysDx’s multi-omic biomarker approach will be the basis for a range of high value MoDx. SysDx testing is a progression from “single-omic tests that today are largely limited to the analyses of genetic aberrations in a patient’s disease. As the molecular drivers of disease are intertwined across thousands of interrelated biochemical pathways, it is vital that a diagnostic be able to test for a more comprehensive set of disease-relevant biomarkers. Quantitative TOCE (qTOCE) technology provides real-time simultaneous detection and quantification of multiple targets in a single channel (“one channel–many targets”). This technology can work with any qPCR instrument to differentiate as many as 7 targets per channel from a single sample, in a single reaction. qTOCE enables multiplex assay development across a wide range of applications, including high-multiplex quantitative real-time PCR and highly selective mutational analysis. “We are excited to collaborate with Seegene, a leading molecular diagnostic technology innovator,” said Dr. David de Graaf, president and CEO, Selventa. “Seegene’s world-class detection technology and assay development in combination with our SysDx platform can result in a wide range of novel MoDx with high clinical utility.” Dr. Jong-Yoon Chun, founder, CTO and CEO of Seegene added, “Selventa’s SysDx platform is a breakthrough approach to biomarker identification that has the potential to vastly improve patient diagnosis and care,” said “Our multiplex PCR technology detecting a wide range of SysDx-derived biomarkers can facilitate better patient diagnostics, improved patient care, and reduced healthcare costs.” LabMedica International June-July/2013 8 VISIT US AT: Booth: 2729 LINKXPRESS COM LMI-07-13 109 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Test Aids Diagnosis of Preeclampsia test with high sensitivity and specificity level helps diagnosis of early onset preeclampsia. The triage placental growth factor (PLGF) test is a fluorescence immunoassay, which, when used in conjunction with a Triage Meter enables the quantitative determination of PLGF in ethylenediaminetetraacetic acid (EDTA) anticoagulated plasma samples. Together with other diagnostic and clinical information, the test aids in the diagnosis of preeclampsia. The Alere (Linz, Austria; www. alere.com) Triage PLGF test can provide a PLGF level from a maternal plasma specimen in just 15 minutes. The Triage MeterPro is a portable fluorescence instrument used to measure the results of the Triage tests from Alere. The Triage MeterPro can be used in a laboratory or in a point-of-care setting. It uses a Class 1 laser as a light source. Light from the laser hits a test device that has been inserted in the meter. This causes the fluorescent dye in the test device to give off energy. The more energy the fluorescent dye gives off, the stronger the signal. The current criteria for defining preeclampsia (raised A Image: A study shows that the Triage PLGF, which measures the placental growth factor (PLGF), can quantify risk in women when preeclampsia is detected (Photo courtesy of Alere). blood pressure and protein in urine) are nonspecific, appear late in the development of the disease, and result in over diagnosis because of their poor specificity. On December 15, 2011, the Lancet published an editorial online that highlights the fact that many maternal deaths in the UK are associated with substandard care and are potentially preventable. The article suggests that it is the failure to diagnose or appropriately manage preeclampsia, which is the most common cause of maternal death. Preeclampsia is a serious and potentially fatal condition that arises in pregnancy, usually in the second or third trimester. The exact cause is unknown but it is thought to be related to a problem with the placenta. The nonspecificity of signs and symptoms contribute to making clinical diagnosis a significant challenge, this represents a high risk to both mother and child. Prof. Christopher Redman, emeritus professor of Obstetrics at John Radcliffe Hospital (Oxford, United Kingdom; www. oxfordradcliffe.nhs.uk) commented, “A reliable and specific test that aids in the diagnosis of those aspects of the preeclampsia syndrome that jeopardize the safety of mother and/or unborn baby would be invaluable. Alere Triage PLGF is a major advance in the assessment for preterm disease.” Automated Microscope Alerts Diagnosticians to Possible Cell Anomalies n automated microscope system runs its own tests and alerts diagnosticians to possible cell anomalies. The Ikonisys (New Haven, CT, USA; www.ikonisys.com) system consists of three parts: a robotic handling apparatus, the reagents needed to run the tests, and image processing software to identify problematic proteins or chromosomes. To use the Iconoscopes microscope system, the lab technician merely needs to load slides with the cell samples, introduce the reagent that will make abnormal cells fluoresce, place up to 25 slides into a cassette, slide the cassette into the machine, and push a button. The robotic handling system will remove each slide one by one and scan the cells to see which ones are abnormal. The machine tells the technician which cells looked suspicious, and he can then spend a couple minutes checking only those. Petros Tsipouras, professor of biology at the University of Athens (Greece; www.uoa.gr) and Ikonisys chairman and CEO, said that the sys- A VISIT US AT: Booth: 3805 LINKXPRESS COM LMI-07-13 110 tem could lead to a noninvasive alternative to amniocentesis or chorionic villus sampling to check fetuses for chromosomal abnormalities that could indicate Downs Syndrome. The system could also look for cancer cells shed by a tumor and circulating in the bloodstream, even when the tumor is too small to image. Such a test could be a useful backup to the prostate specific antigen (PSA) tests given to men to look for prostate cancer and would cut down on unnecessary biopsies The company has begun marketing the automated system, starting with a test for bladder cancer and another for abnormalities on amniocytes that would indicate birth defects. It plans to introduce another test, based on a third-party reagent, to look for signs of breast cancer. Ikonisys has launched a clinical laboratory for its rare-cell-based tests. Under Food and Drug Administration (FDA; Silver Spring, MD, USA; www.fda.gov) “home brew” rules, the company can use its tests inhouse before it receives FDA approval to sell to others. LabMedica International June-July/2013 10 LINKXPRESS COM LMI-07-13 111 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Test Diagnoses and Monitors Thyroid Cancer After Surgery new laboratory test for the diagnosis and lifelong monitoring of medullary thyroid cancer patients after thyroid surgery, was launched globally (except in the US). Elevated concentrations of calcitonin in the blood are associated with the onset of this type of cancer. The new test is an important component of medical assessment especially when the patient’s symptoms are not specific. When performed alongside further examinations, the calcitonin test supports final clinical clearance. Patients can be treated at an earlier stage with greater chances of success. A Roche (Basel, Switzerland; www. roche/com) developed the Elecsys Calcitonin assay and launched it for patients with nonspecific tumors of the thyroid. “The development of new laboratory tests for cancer management reflects our key goal of diagnostic solutions that support healthcare professionals with clear, actionable information and can thus contribute to increasing patient survival,” said Roland Diggelmann, COO, Roche Diagnostics. When performed alongside further examinations, the calcitonin test supports final clinical clearance. Patients can be treated at an earlier stage with greater chances of success. The test also expands Roche’s portfolio for improved thyroid management. Designed for use on Roche’s cobas modular analyzer platform, the immunoassay Elecsys Calcitonin offers healthcare professionals an integrated solution for accurate diagnosis and reliable patient monitoring, significantly improving medical decision-making and treatment planning. Image: The Elecsys Calcitonin assay is designed for cancer detection and monitoring of patients with nonspecific tumors of the thyroid (Photo courtesy of the Mayo Foundation). Biofluid Ribonucleic Acid Isolation Kit Launched n isolation kit for the extraction of small ribonucleic acid (RNA) from serum, plasma, urine and other biofluids has been specifically optimized for such applications. The new biofluids kit allows scientists to obtain high quality microRNA from virtually all types of biofluids in just 45 minutes and the workflow is completed in six simple steps without the use of hazardous chemicals such as phenol and chloroform. The miRCURY RNA Isolation Kit – Biofluids (Exiqon; Vedbaek, Denmark; www.exiqon.com) is optimized to work with company’s highly sensitive miRCURY LNA Universal real-time microRNA polymerase chain reaction (qPCR) platform. The Isolation Kit is ideal for use with urine samples together with Exiqon’s Toxicology Focus microRNA PCR Panels, and for serum and plasma samples with the Serum/Plasma Focus microRNA PCR Panels, or indeed any of the almost 2,000 prevalidated qPCR microRNA assays available. The Isolation Kit – Biofluids can be used with a centrifuge or a vacuum manifold is provided in pack sizes of 10 and 50 units. A VISIT US AT: Booth: 5219 LINKXPRESS COM LMI-07-13 112 The company offers a complete range of PCR products for microRNA analysis, which includes ready-to-use panels for genome-wide screening of human, mouse and rat microRNAs, numerous focus panels, the fully flexible Pick & Mix panels, spike-in kits, cDNA synthesis and PCR Master Mix kits, as well as unique qPCR data analysis software. Customers that have identified novel microRNAs can take advantage of Exiqon’s proprietary LNA chemistry and unique design algorithm through easy-to-use online tool for high quality design of custom microRNA qPCR assays. Henrik M. Pfundheller, Senior Vice President Sales and Marketing at Exiqon, said, “Our customers want fully integrated systems that allow highly robust and sensitive microRNA profiling in difficult samples such as blood and urine, and we deliver the solution with this new kit. We have not only optimized the protocols to ensure the highest yield in the market but have also made sure that the sample does not contain any inhibitors which may jeopardize the downstream PCR analysis.” LabMedica International June-July/2013 12 LabMedica for daily laboratory medicine news click to www.labmedica.com Blood Test Tracks Response to Cancer Treatment blood test that tracks fragments of DNA shed by dying tumor cells could be used to monitor how well patients are responding to cancer treatment. In women with advanced breast cancer, the blood test could provide a noninvasive alternative to biopsies, and help adapt treatment to individual patients and the progress of disease. A team of scientists at the Cancer Research Institute (Cambridge, UK; www.cancerresearchuk.org) compared circulating tumor DNA against the two other well-known biomarkers, cancer antigen 15-3 (CA 15-3), and circulating tumor cells, to assess disease progress in 30 women being treated for advanced metastatic breast cancer. Serial blood samples were collected between April 2010 and April 2012 at intervals of three or more weeks. Sequencing was performed on DNA from breast cancer specimens and matched normal tissue specimens, with the use of one or both of two methods: tagged-amplicon deep sequencing for the gene encoding the phosphatidylinositol- 4,5-bisphosphate 3-kinase, catalytic subunit alpha protein (PIK3CA) and for the gene encoding for tumor protein p53 (TP53) or paired-end whole-genome sequencing. The scientists measured the levels of CA 15-3 in 50 L aliquots of plasma by means of the ADVIA Centaur immunoassay system (Siemens Healthcare; Erlangen, Germany; www.siemens.com). The team compared the three sets of biomarker results with computed tomography (CT) scans to see if changes in the biomarkers matched up with changes in the cancer. They found that out of the three biomarkers the circulating tumor DNA gave the most accurate real time picture of changes taking place in the body. They successfully detected tumor DNA in 29 of the 30 women (97%), while circulating tumor cells were detected in 26 of the 30 (87%) and CA 15-3 was detected in 21 of 27 (78%). VISIT US AT: Carlos Caldas, MD, FMedSci, co-lead author said, “We can use blood samples to track how breast cancer is progressing as fragments of DNA are shed by cancer Booth: 1916 cells when they die, meaning they can be detected in blood samples using sensitive new sequencing techniques. The levels of tumor DNA are telling us how the cancer is responding to treatment.” Circulating tumor DNA represents a “liquid biopsy” alternative, allowing sensitive and specific serial sampling to be performed during the course of treatment. The study was published on March 13, 2013, in the journal New England Journal of Medicine (NEJM). A Image: A cluster of breast cancer cells showing visual evidence of programmed cell death (Photo courtesy of Annie Cavanagh, Wellcome Images). V I S I T LINKXPRESS COM R E A D E R S E R V I C E ® P O R T A L Access Interactive Digital Magazine 13 LabMedica International June-July/2013 LINKXPRESS COM LMI-07-13 113 LabMedica Image Cytometry Measures Mononuclear Cell Concentration rapid fluorescence-based image cytometry system has been utilized for brightfield and fluorescence imaging analysis of cellular characteristics. The viability and concentration of isolated peripheral blood mononuclear cells (PBMCs) are traditionally measured by manual counting with trypan blue (TB) using a hemacytometer, but red blood cell (RBC) contamination can be an issue. Scientists at the Nexcelom Bioscience Laboratories, (Lawrence, MA, USA; www.nexcelom.com) compared their Cellometer Vision instrument with both manual counting and automatic method for accurately measuring the concentration of PBMCs in prepared blood samples. Fifteen freshly isolated samples were stained with acridine orange and propidium iodide (AO/PI) to identify RBC contamination. The five different methods were manual counting of TBstained PBMCs in hemacytometer; manual counting of PBMCs in brightfield images; manual counting of acetic acid lysing of RBCs with TBstained PBMCs; automated counting of acetic acid lysing of RBCs with PI-stained PBMCs; and AO/PI dual staining method. Each of the 15 samples measured was categorized into low, medium, or high RBC contamination. Five samples showed less than 10% of RBC contamination, six samples showed 10% to 40% of RBC contamination, and four samples showed RBC contamination greater than 40%. The total particles counted in brightfield increased due to the addition of RBCs, while AO/PI staining showed consistent measurement of PBMCs, which again demonstrated the robustness of the method despite RBC contamination. Although A inherent RBC contaminants may have existed in the sample, the purpose was to observe the increasing difference between fluorescently stained nucleated cells and total brightfield cell count including RBCs. The authors concluded that fluorescencebased image cytometry can be utilized to eliminate the RBC-induced error in patient samples, which can improve accuracy and efficiency of PBMC measurement. Cellometer image cytometry has also demonstrated fluorescence-based cell population analysis such as apoptosis detection, cell cycle, as well as surface marker labeling. The system can be used to perform immunophenotyping of collected PBMCs, and can quickly characterize incoming patient samples, further simplifying PBMC characterization protocol. The study was published in the February 2013 issue of the Journal of Immunological Methods. Image: The Cellometer Vision instrument, designed for measuring the concentration of PBMCs in prepared blood samples (Photo courtesy of Nexcelom Bioscience Laboratories). Semiconductor-Based Sequencing Achieves Rapid Cancer Genotyping enotyping platforms should provide rapid turnaround times and work effectively with limited amounts DNA even when it is of poor quality. A method that combines highly multiplexed polymerase chain reaction (PCR) with semiconductorbased sequencing has been described that works well with formalin-fixed, paraffin-embedded (FFPE) tissue specimens that often yield low quality DNA. Scientists at the Knight Cancer Institute (Portland, OR, USA; www.ohsu.edu) have described semiconductor-based sequencing of DNA from FFPE specimens using a single-tube, multiplexed panel of 190 amplicons targeting 46 cancer genes. A validation set of 45 FFPE tumor specimens containing 53 point mutations previously identified with a mass spectrometry-based genotyping platform, along with 19 indels ranging from 4 to 63 base pairs (bp), was used to evaluate assay performance. The investigators used as little as 10 ng of input DNA, with as average read depths of 2,000 times, which can be obtained in 48 hours, with more than 95% of the reads on target. With a mutant-allele ratio cutoff of 8%, they were able to achieve 100% sensitivity and 95.1% specificity of point mutation detection. All indels were visible by manual inspec- G LINKXPRESS COM LMI-07-13 114 tion of aligned reads; 6/9 indels were equal to or greater than 12 bp in length were detected by the variant caller software either exactly or as mismatched nucleotides within the indel region. Indels are a special mutation class, usually defined as a mutation resulting in a co-localized insertion and deletion and a net gain or loss in nucleotides. Nineteen known insertions and deletions were all visible on manual inspection of aligned reads, although only two were identified exactly by the variant caller software. It is expected that manual inspection will be needed to evaluate common gene regions known to harbor large indels, such as in the v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog (KIT) and the epidermal growth factor receptor (EGFR). Notably, 27 variants were observed in genes that had not previously been tested in these samples, and all were confirmed. The authors concluded that the rapid turnaround time and low input DNA requirements make the multiplex PCR and semiconductor-based sequencing approach a viable option for mutation detection in a clinical laboratory. The study was published in the March 2013 issue of the Journal of Molecular Diagnostics. LabMedica International June-July/2013 14 LINKXPRESS COM LMI-07-13 115 LINKXPRESS COM LMI-07-13 117 LINKXPRESS .COM LMI-07-13 191 LINKXPRESS .COM LMI-07-13 192 LINKXPRESS .COM LMI-07-13 193 LINKXPRESS .COM LMI-07-13 194 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Study: Microscopic Hematuria an Unreliable Indicator of Bladder Cancer study found that microscopic hematuria does not necessarily mean cancer, and has led to a new model to predict renal and bladder cancer risk better. Blood found in urine that cannot be seen by the naked eye does not necessarily indicate the presence of cancer, according to a Kaiser Permanente Southern California (Gardena, CA, USA; www. kaiserpermanente.org) study published in the January 11, 2013, online version of the journal Mayo Clinic Proceedings. Tests routinely done on patients with this condition could be avoided and has led to the creation of a screening tool to better diagnose certain types of cancers. The study examined the electronic health records of more than 4,000 patients with microscopic hematuria who were members of Kaiser Permanente health plans in Southern California, Northern California, and the Pacific Northwest between January 2009 and August 2011. The study found that an extremely small proportion of patients with microscopic hematuria were subsequently discovered to have cancer. Among the 4,414 patients who were evaluated for the condition, only 2.3% were diagnosed with bladder cancer and only 0.2% had a pathologically confirmed diagnosis of renal cancer. Pathology reports were reviewed for all patients with cancer diagnoses. A total of 50 can- A cers (44 bladder and 6 renal) were confirmed in the test cohort and 61 cancers (56 bladder and 5 renal) in the validation cohort. In the test cohort, 5 of 55 neoplasms were benign on the final pathology report, and 1 patient with a 1.7-cm, enhancing renal lesion elected close observation and was counted as having stage T1 cancer. In the validation cohort, 56 of 59 bladder cancers were confirmed as were 5 of 7 renal cancers (2 renal lesions were benign hemorrhagic renal cysts). The overall cancer detection rate was 1.9% in the test cohort (50 of 2630 patients) and 3.4% for the validation cohort (61 of 1784 patients). Overall, 100 bladder cancers were diagnosed among 4414 patients evaluated (2.3%), and only 11 renal cancers were pathologically confirmed (0.2%). It is probable that patients with microscopic hematuria, especially those under 50 years of age and with no history of gross hematuria, may not benefit from further evaluation, and therefore could avoid routine tests that contain unnecessary risks such as radiation exposure from CT scans and invasive endoscopy. “This study provides scientific data that confirms what others have suspected – that microscopic hematuria is an unreliable indicator of renal or bladder cancer,” said study lead author Ronald K. Loo, MD, and regional chief of urology for the Southern California Permanente Medical Group. “This suggests that a large number of follow-up examinations of patients with asymptomatic microscopic hematuria, which often includes radiologic and invasive procedures, could be safely avoided.” Image: A bladder cancer cell (Photo courtesy of the CDC). High-Tech Blood Test Predicts Premature Birth Risk blood test that predicts preterm birth harvests exosomes from a blood sample and looks for a specific biomarker fingerprint that indicates a high risk for preterm birth, even in women with no known risk factors. NX PharmaGen (Louisville, KT, USA; www.nxpharmagen.com) has conducted early studies with maternal serum samples using its NeXosome Preterm Birth Assay. Two cohorts were balanced for age and subjects were asymptomatic with no known risk factors, such as hypertension, twins, or gestational diabetes. The average age was 28. In the study, a preterm birth was before 34 weeks and after 37 weeks was full-term. As early as 15 weeks, the test could detect a risk for preterm birth. NX PharmaGen’s initial human studies also suggest the test could be used for early detection, sub-typing/staging, drug receptor presence/absence, and recurrence monitoring for cancer, including lung cancer, ovarian cancer, and brain cancer. “If you harvest exosomes and open them up and look at their con- A LINKXPRESS COM LMI-07-13 118 tent, the protein content of a term pregnancy looks very different from a preterm pregnancy,” commented Brian Brohman, co-founder and chief business officer of NX Pharmagen. The initial benefit of the NeXosome Preterm Birth Assay will allow doctors to move a patient from normal OBGYN care to a fetal medicine specialist. “This is a tool to tell doctors where they should be spending extra time,” Brian Brohman said. “If you can extend the pregnancy on knowledge of a risk, you can save lots of money.” Next steps for NX PharmaGen are assay optimization and validation. Brian Brohman said that it is too early to know which regulatory path the company will take: Clinical Laboratory Improvement Amendments a laboratory-developed test (CLIA LDT) and an US Food and Drug Administration (FDA; Silver Spring, MD, USA; www.fda.gov) approval. The company is seeking patents on the biomarker pattern that indicates a high risk of premature birth and the method of harvesting exosomes from a blood sample. LabMedica International June-July/2013 18 LINKXPRESS COM LMI-07-13 119 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Rapid Tuberculosis Detection Test Endorsed by Experts diagnostic test for tuberculosis (TB) that can accurately and quickly detect both TB and drug-resistant strains has been authorized by leading experts in the field. The diagnostic accuracy of the Xpert MTB/RIF test can provide timely advice for clinicians and policymakers in countries where TB is a major public health problem and where drug resistance further complicates efforts to control TB. Scientists from the Cochrane Infectious Diseases Group, McGill University (Montreal, QC, Canada; www.mcgill.ca) and the Foundation for Innovative New Diagnostics (FIND; Geneva, Switzerland; www.finddiagnostics.org), analyzed data from 18 studies involving a total of 7,816 people, with most studies being carried out in low- and middle-income countries. Their analysis showed that when Xpert MTB/RIF test is being used as a replacement for smear microscopy for 1,000 people being screened, of whom 150 have TB, the test picks up 132 of the 150 cases (88%) and falsely diagnoses 17 (2%) with TB. Where the Xpert test is being used as a replacement for culture-based drug susceptibility testing, it is also able to detect the equivalent of 141 out of 150 cases (94%) of rifampicin resistance. When Xpert is used as a follow-on test, after conventional smear microscopy has already produced a negative result, it picks up 101 out of 150 cases (67%). As smear-negative TB is not picked up by smear microscopy because microscopy cannot detect small numbers of bacteria, Xpert picked up A 67% of this group that would have been missed by microscopy. The authors concluded that when the Xpert assay is used as an initial diagnostic test for TB detection and rifampicin resistance detection in patients suspected of having TB, multi-drug-resistant (MDR)-TB, or human immunodeficiency virus (HIV)-associated TB, it is both sensitive and specific. Xpert may also be valuable as an add-on test following microscopy for patients who have previously been found to be smear-negative. An Xpert result that is positive for rifampicin resistance should be carefully interpreted and take into consideration the risk of MDR-TB in a given patient and the expected prevalence of MDR-TB in a given setting. The Xpert MTB/RIF test is manufactured by Cepheid Inc. (Sunnyvale, CA, USA; www.cepheid.com). Karin Weyer, DSc, Coordinator, Laboratories, Diagnostics and Drug Resistance at the World Health Organization (WHO; Geneva, Switzerland; www.who.int) said, “This Cochrane Review provides high quality evidence that reinforces WHO’s endorsement of this test. Recent price reductions have greatly facilitated rollout of this technology with 1.4 million test cartridges and over 200 GeneXpert instruments for the rapid detection of TB and rifampicin resistance will be distributed in 21 countries with a high burden of TB.” The review was published on January 31, 2013, in the Cochrane Library. Image: The Xpert MTB/RIF test for the detection of tuberculosis (Photo courtesy of Cepheid). Digital PCR Chosen to Develop Leukemia Test general method called “limiting dilution polymerase chain reaction (PCR)” was developed for quantifying PCR targets. This method was subsequently used for the quantification of marker mutations in acute leukemia. By diluting DNA samples so that only one or two copies per well were present and then amplifying those copies with PCR, scientists were able to A LINKXPRESS COM detect two copies of leukemic DNA against a background of 160,000 normal genomes. The team then reported that the outcome of acute leukemia can be predicted by measuring the response to treatment using limiting dilution PCR to quantify the leukemic cells at high sensitivity. Prof. Alec Morley and his lab at Flinders University and Medical Center in Adelaide (SA, Australia; LMI-07-13 120 www.flinders.sa.gov.au) then used real-time quantitative PCR (qPCR) to develop a highly sensitive method for isolating and quantifying the chromosomal translocation that is typically associated with chronic myelogenous (or myeloid) leukemia (CML), also known as chronic granulocytic leukemia (CGL), a cancer of the white blood cells. It is a form of leukemia characterized by the increased and unregulated growth of predominantly myeloid cells in the bone marrow and the accumulation of these cells in the blood. Because the translocation point for each patient is different in CML, real-time PCR conditions may vary from patient to patient and may therefore produce different results. Therefore, real-time PCR conditions may vary from patient to patient and may therefore produce different results. The lab has now returned to digital PCR. Monoquant (www.monoquant.com.au), a company associated with Flinders University, used BioRad’s (Hercules, CA, USA; www.bio-rad.com) QX100 system to refine the new clinical test for CML. Not only does the instrument offer high sensitivity but also removes variability in amplification efficiency that results from using patient-specific PCR primers, a traditional sticking point for the US Food and Drug Administration (FDA; Silver Spring, MD, USA; www.fda.gov). Monoquant hopes the results from the QX100 system will fast-track the FDA approval process for its test. LabMedica International June-July/2013 20 LINKXPRESS COM LMI-07-13 121 PRODUCT NEWS To receive prompt and free information on products, log on to www.LinkXpress.com or fill out reader service form located on last page AUTOMATED OSMOMETER BENCH-TOP ANALYZER BIOCHEMISTRY ANALYZER Advanced Instruments Beckman Coulter BioSystems AUTOMATED CLINICAL ANALYZER The A2O fully automated unit offers ease of use and walk-away operation. Key features include 20-sample capacity, direct primary tube sampling, liquid level detection, positive sample identification, bidirectional data interface, and intuitive software control package. The UniCel DxH 600 cellular analysis system features high-quality results, improved first-pass accuracy, and automatic rerun and reflex testing. The analyzer is designed for mid- to high-volume labs, and is intended to help reduce overall manual review rates and processes. The BA400 analyzer is designed to offer enhanced performance for labs looking to achieve the highest efficiency with optimal operative cost. Key features include 88 refrigerated positions with internal barcode reader, and 135 positions for samples, controls, and standards. The Biolis 50i is designed to measure 480 tests per hour, or 580 tests per hour with ISE. Key functions of the system include HbA1c automatic preparation, clot detection, and dedicated ISE probe. LINKXPRESS COM LMI-07-13 201 LINKXPRESS COM LMI-07-13 202 Test Predicts Harmful Breast Cancer Mutations multiple gene expression-profile test is able to predict the presence of harmful breast cancer type 1 (BRCA1) or BRCA2 gene mutations in otherwise healthy women carrying the mutation. A Women with a mutation in their BRCA1 or BRCA2 gene have a significantly increased risk for developing breast cancer or ovarian cancer, and for many of those at risk the disease may develop at an early age. VISIT US AT: Booth: 5548 LINKXPRESS COM LMI-07-13 203 Scientists at the Hadassah Hebrew University Medical Center (Jerusalem, Israel; www.hadassah. org.il) obtained fresh blood samples from proven BRCA1 or BRCA2 mutation carriers and mutation-negative women. All subjects were healthy women between ages 25 and 50 years, with no personal history of cancer. The test was carried out on leucocytes from the blood samples donated by nine healthy women with a mutated BRCA1 gene and eight healthy women with a mutated BRCA2 gene. The investigators extracted the total ribonucleic acid (RNA) from these cells and compared it to the total RNA from identically treated white blood cells from 10 healthy, noncarrier women. About 1,500 genes were differentially expressed between carriers and noncarriers. The list was narrowed down to 18 genes that were the most significantly differentiated Tokyo Boeki Machinery LINKXPRESS COM LMI-07-13 204 between the two groups of women. The final narrowing was done with a validation study of a model using 21 of the newly identified genes and five control genes to predict the risk for carrying a mutation. The blood samples used were from an independent group of 40 women who were carriers of mutated BRCA1 and/or BRCA2 and 17 noncarrier women. The model had a sensitivity of 95% and a specificity of 88%. Asher Y. Salmon, MD, the senior author and a breast cancer specialist, said, “In wealthy societies, it can become a screening tool for identifying individuals with a very high susceptibility for carrying a mutation, and full sequencing can be reserved only for them. In societies in which sequencing is not feasible, this test can substitute for it with a very high accuracy rate.” The study was published on January 22, 2013, in the journal Cancer Prevention Research. Image: Israeli researchers at Hadassah Medical Center have developed a test that can predict if healthy women are at a significant risk of developing breast or ovarian cancer. Using a blood test, the researchers were able to identify the presence of a harmful mutation, which may trigger those types of cancers in women (Photo courtesy of Jspace). LINKXPRESS COM LMI-07-13 104 LabMedica International June-July/2013 22 VISIT US AT: Booth: 2429 LINKXPRESS COM LMI-07-13 122 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Rapid Malaria Test Assessed for Field Use apid diagnostic tests (RDT) for malaria infections could replace light microscopy in poor resource locations as their ease of use and accuracy are improved. Although light microscopy (LM) is the gold standard for malaria diagnosis it is not available in many outlying health facilities, it is time consuming, requires highly trained personnel, and needs careful preparation and application of reagents to ensure quality results. Scientists at the University of Gondar (Ethiopia; www.uog.edu.et) collected blood samples from 254 patients suspected to have malaria at a health center in Northwestern Ethiopia in the late malaria transmission-peak season from November 2011 to December 2011. The male to female ratio was 1.57:1, while the mean age of the participants was 21.4 years with an age range of 5 months to 75 years. Most of the participants were from rural areas of the district. The samples were examined immediately by light microscopy (LM) and the RDT. The overall parasite positivity using LM was 104 (40.9%): 40 (15.7%) for Plasmodium falciparum, 58 (22.8%) for P. vivax, and 6 (2.4%) had R Technique Catalogs Lymphoma-Linked Genetic Variations novel approach has been devised to sort out random mutations in genes associated with lymphoma, and the proteins produced by the genes could be tested to see how they performed. Antigen receptor signaling to nuclear factor of kappa light polypeptide gene enhancer in B-cells (NFκB), is essential for normal lymphocyte activation, but is dysregulated in several types of lymphoma. Scientists at Johns Hopkins School of Medicine (Baltimore, MD, USA; www.hopkinsmedicine.org) made copies of the caspase recruitment domain family, member 11 (CARD11) gene in a way that made random mutations likely. The CARD11 protein plays a key role in signaling the presence of infection, which leads infection-fighting white blood cells to grow and divide. The investigators then used the faulty copies to make mutant proteins, and tested the ability of those proteins to trigger the signaling reaction that is CARD11’s specialty. This allowed them to find to which mutations increased the protein’s activity and by how much and this information could then be compared to emerging data about CARD11 mutations found in human lymphomas. They noted that CARD11 is part of the NF- κB signaling pathway, a target of some cancer therapies. Joel Pomerantz, PhD, an associate professor in the Johns Hopkins School of Medicine’s Institute for Cell Engineering, and senior author of the study said “Our goal was to correlate various mutations with potential to promote lymphoma. We imagine eventually being able to correlate response to a particular therapy with a particular mutation.” The cancers called lymphomas, affect about 75,000 patients in the United States of America each year. The study was published in the January 2013 issue of the journal Molecular and Cellular Biology (www.mcb.asm.org). A LabMedica International June-July/2013 24 mixed infections. The CareStart RDT gave an overall parasite positivity of 100 (39.4%) with 50 (19.7%) for P. falciparum, 24 (9.5%) for P. vivax, and 26 (10.2%) for mixed infections. Difference in detection of P. falciparum parasites using either the LM or the RDT was insignificant, but difference in detection of P. vivax using the LM and RDT was found to be significant. The CareStart Malaria COMBO Test kit (Diasys Ltd.; New York, NY, USA; www.diasys.com) is a three-band RDT detecting histidine-rich protein 2 (HRP-2) and PAN-lactate dehydrogenase (pLDH), yielding results in 20 minutes. The test has an overall sensitivity of 95% and specificity of 94.2%. The sensitivity and specificity for mixed infections and non-falciparum malaria was slightly less. The authors concluded that the CareStart RDT test showed good sensitivity and specificity with an excellent agreement to the reference light microscopy. The RDT could therefore be used in place of microscopy, which in poor set-ups cannot be used routinely. The full study is available since in November 2012 in the Malaria Journal Image: Red blood cells infected with Plasmodium falciparum, the cause of malaria (Photo courtesy of Visual Photos). LabMedica for daily laboratory medicine news click to www.labmedica.com Image: The LSM 700 laser scanning microscope (Photo courtesy of Carl Zeiss Microscopy). New Confocal Laser Microscope Introduced laser-scanning microscope sets a new standard for confocal microscopy. It offers maximum performance at a practical price. The LSM 700 Laser Scanning Microscope from Carl Zeiss Microscopy LLC (Oberkochen, Germany; www.zeiss.com/micro), offers microscopy solutions and systems for research, routine, and industrial applications. In addition, Carl Zeiss Microscopy markets microscopy systems for the clinical market, as well as optical sensor systems for industrial and pharmaceutical applications offers innovative solutions for image analysis with good sensitivity and quality at an attractive price/performance ratio. The fields of application extend from simple routine to multidimensional images. LSM 700 can be utilized both at individual A workstations and in user groups. The microscope has a small footprint, which makes it suitable for small rooms. The fields of application extend from simple routine to multidimensional images in biomedical research. High flexibility in both application and system structure is the outstanding feature of the LSM 700. The ZEN 2009 software from Carl Zeiss makes its operation very clear and easy to learn allowing intuitive use even by firsttime users. Complex methods are easy to control and the user has a clear overview of the experiment at all times. The system can be combined with a large number of microscope stands and tailored to the personal requirements of each user. This makes it ideal as an entry-level system for confocal microscopy. Enzyme May Lead to Better TB Test n enzyme has been identified that will trigger the rapid breakdown of several Mycobacteria, which could lead to better tests for the deadly tuberculosis infection. The current bacterial culture test for tuberculosis infections is highly accurate but time-consuming, taking up to several weeks, while the diagnostic process called nucleic acid-based amplification (NAA) faces difficulty in breaking open, or lysing bacteria. Scientists at University of Pittsburgh Graduate School of Public Health (PA, USA; www. publichealth.pitt.edu) show that exposure to an enzyme called esterase from Mycobacterium smegmatis hydrolyzes the ester linkage of trehalose dimycolate in vitro, which triggers the rapid and efficient lysis of Mycobacterium tuberculosis, Mycobacterium bovis, and Mycobacterium marinum. A rapid and efficient lysis of trehalose dimycolate hydrolase (TDMH) exposed M. tuberculosis, and a subsequent release of nucleic acids (NA) offered a unique opportunity to use this enzyme for achieving more sensitive detection in a nucleic acid amplification assay for the diagnosis of tuberculosis (TB). The nucleic content in the supernatant of TDMH-exposed bacilli started to increase within 30 minutes of exposure, and it peaked at around 60 minutes. Treatment of samples with TDMH prior to the amplification reaction facilitated the NA detection in 37 samples, a highly significant improvement in the numbers of positive detection. The investigators also demonstrated that this quick lysis of M. tuberculosis improved its detection at lower density. Anil Ojha, PhD, an assistant professor and senior author of the study said, “Tuberculosis is a huge public health burden. Clearly, controlling the infection is heavily dependent upon an effective diagnosis. Discovery of enzyme-based mycobacteria lysis has the potential to increase the sensitivity of NAA.” The study was published on January 4, 2013, in the Journal of Biological Chemistry. A LINKXPRESS COM LMI-07-13 125 25 LabMedica International June-July/2013 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Immune Response Predicts Predisposition to Burkitt Lymphoma n important association has been identified between Plasmodium falciparum (Pf) malaria and endemic Burkitt Lymphoma (eBL) that may help identify young children who are more susceptible. The evolving complexity and heterogeneity of the humoral immune response to the deadliest of malarial parasites is possibly a key component for risk of developing eBL in young children who reside in malaria endemic areas of Equatorial Africa. Scientists at George Washington University (Washington DC, USA; www.gwu.edu) developed, optimized, and standardized an extensive panel of serological tests of recombinant Pf antigens representing several stages of the parasite lifecycle assayed in more than 700 cases and control samples from young children. The children were domiciled in Pf malaria endemic areas of Ghana, had eBL, and A were matched with children of the same age, sex, and of the same village who did not have eBL. The team used an immunomics approach to their antibody response to Pf malaria. This enabled different statistical and epidemiological associations to be made between a range of antibody response to Pf malaria antigens and eBL, establishing a pattern of immune responses rather than a single immune response, identifying the children who are at risk for developing eBL. The results of study showed a significant increase in the risk of developing eBL in young children who had a distinct pattern of antibody responses to several different recombinant Pf malaria antigens, including some antigens, which are vaccine candidates. Of special note, the study also found a significant decreased risk of eBL in children with antibodies to SE36, a vaccine candidate protein that has been associated with lower risk of malaria in epidemiological studies. Endemic Burkitt Lymphoma is a cancer of the lymphatic system in children affecting in particular their B-lymphocytes. Jeffrey Bethony, PhD, who was the senior author of the study, said, “Plasmodium falciparum malaria has long been suspected as an important trigger to Epstein Barr virus-associated lymphoma of very young children living in Equatorial Africa. Our study adds to this literature, explaining that it is not simply the presence or absence of Pf malaria infection, but the breath and complexity of the antibody response to malaria that may be the true indicating factor for who develops endemic Burkitt Lymphoma and who does not.” The study was presented at the 54th Annual Meeting of the American Society of Hematology held December 8-11, 2012, in Atlanta (GA, USA; www.hematology.org). Blood Test for Autism Outperforms Existing Genetic Tests blood test for autism spectrum disorders (ASDs) presents evidence that abnormal immunologic activity affecting brain development may help explain some of autism’s origins. The blood test was described on December 5, 2012, in the online open access journal PLOS ONE. It is based on a large, gene-chip investigation and it could enable early diagnosis of autism in about two thirds of patients before clear symptoms start to appear at 5 years, the average age of diagnosis in the US. Sek Won Kong, MD, of the Boston Children’s Hospital Informatics Program (CHIP; Boston, MA, USA; www.chip.org), is the leader of a team of investigators who analyzed blood samples from 66 male patients with ASDs, and compared them with 33 age-matched boys without ASDs. They studied RNA signatures using microarrays and discovered differences in gene activity, or expression between the two groups. Analyzing the blood samples, Dr Kong and colleagues flagged 489 genes as having distinct expression patterns in the ASD group, and narrowed this to a group of 55 genes that correctly identified or ruled out autism in 76% of samples. They validated their findings in a second group of 104 male and female patients with ASDs and 82 controls, achieving an overall classification accuracy of 68%. A The 55 genes whose expression was altered suggest more than one path to what we know as autism. Based on their genetic signatures, subjects with ASDs clustered into four subgroups marked by changes in different biological pathways. “It’s clear that no single mutation or even a single pathway is responsible for all cases,” said Dr Kohane. “By looking at this 55-gene signature, which can capture disruptions in multiple pathways at once, we can say with about 70 percent accuracy, ‘this child does not have autism,’ or ‘this child could be at risk,’ putting him at the head of the queue for early intervention and evaluation. And we can do it relatively inexpensively and quickly.” Most current theories of autism focus on disordered synapses but, Dr. Kohane speculates that brain development in autism may be impaired by abnormal immune responses to infections and other stressors, during infancy or prenatally. Boston Children’s Hospital has licensed the gene signature approach exclusively to SynapDx (Southborough, MA, USA; www.synapdx.com). It can potentially diagnose autism far more often than the genetic tests currently available. Current tests look for variety of autism-related mutations but altogether, the known mutations account for fewer than 20% of autism cases. mRNA Assay Offers Applications in Clinical Biomarker Discovery n mRNA quantitative assay is a simple, highthroughput, reproducible method, that offers a wide range of applications in clinical biomarker discovery and molecular testing to target personalized medicine. The assay employs simple filtration of blood to capture leukocytes prior to extraction and purification of mRNA. This eliminates interference by the large amount of red blood cells in whole blood, and enables sensitive detection of changes in mRNA levels. The system adopts a 96-well microplate format, making it suitable for simultaneous processing of multiple samples. The drug A LINKXPRESS COM LMI-07-13 126 response of an individual is simulated in a test tube by using whole blood samples stimulated with the drug. This system successfully brought a new “ex vivo” concept, which measures in vivo response in an in vitro assay and makes it possible to predict drug efficacy. With this system, Hitachi Chemical (Tokyo, Japan; www.hitachi-chem.co.jp/english) plans to conduct contract test services for pharmaceutical companies to find novel biomarkers and select subjects for clinical trials by predicting drug efficacy. It eventually aims to utilize the system as a companion diagnostic. LabMedica International June-July/2013 26 LabMedica for daily laboratory medicine news click to www.labmedica.com Assay Detects Minimal Residual Disease in Blood Based Cancers clinical assay measures minimal residual disease (MRD) in a range of blood-based cancers that will help doctors more effectively determine effectiveness of treatments, monitor patient remission status, and personalize future treatments. Adaptive Biotechnologies (Seattle, WA, USA; www.adaptivebiotech.com), a provider of next-generation sequencing assays for the adaptive immune system, has launched clonoSEQ, a clinical assay that measures minimal residual disease (MRD) in a range of blood-based cancers that is significantly more sensitive than today’s most common pathology tests. Minimal residual disease refers to small numbers of leukemic cells that remain in the patient during treatment or after treatment when the patient is in remission. The number of these residual cells may be, in some cases, correlated with the risk of relapse. Knowledge of MRD can influence clinical care and increase cure rates. Adaptive has extensive experience applying its MRD assay for research in centers worldwide, and has instituted quality control measures to markedly improve the accuracy and sensitivity of MRD testing as well as simplify data reporting to make comprehension easier and quicker for hematologists. The company developed a set of immune receptor templates to eliminate polymerase chain reaction (PCR) amplification bias. It has instituted a systematic chain of custody to handle customer samples. Its bioinformatics platform enables the measurement of MRD as a ratio of the malignant clone to the total number of nucleated cells in a blood sample as well as to the lineagerelated cells. The launch of clonoSEQ follows demonstration by Adaptive Biotechnologies, in collaboration with the Fred Hutchinson Cancer Research Center and the University of Washington department of laboratory medicine, that clonoSEQ detected minimal residual disease in nearly twice the number of patients with T-lineage acute lymphoblastic leukemia/lymphoma (TALL) than flow cytometry. The study was published in the May 2012 journal Science Translational Medicine. Future plans for clonoSEQ include the development and distribution of a proprietary kit that would allow for the assay to be performed in point-ofneed clinical pathology laboratories. A 27 LabMedica International June-July/2013 Image: ClonoSEQ is a set of CLIAstandardized assays developed by Adaptive for highly sensitive (approximately 106) detection of Minimal Residual Disease (MRD) in leukemia and lymphoma patients. The assay focuses on Tcell receptor or B-cell receptor (Ig) Complementarity Determining Region 3 (CDR3) chains. The nucleotide sequences that encode the CDR3 regions are generated by site-specific recombination between genomic variable (V), diversity (D), and joining (J) region gene segments (Photo courtesy of Adaptive Biotechnologies). LINKXPRESS COM LMI-07-13 127 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Coagulation Test Correlates Protein Concentration for Plasma Cell Dyscrasia Diagnosis of Prostate Cancer Uses Oncogene Molecular Signature diagnostic test distinguishes patients with clinically relevant prostate cancer from normal prostate in men with elevated prostate-specific antigen (PSA) levels. The team worked with three oncogenes previously associated with poorer outcomes in prostate cancer: c-Myc , Ha-Ras, and v-Src. Led by Richard G. Pestell, MD, PhD, director of the Kimmel Cancer Center (KCC; Philadelphia, PA, USA; www.kimmelcancercenter.org) and the chair of the department of cancer biology at Thomas Jefferson University (Philadelphia, PA, USA; www.jefferson.edu) the team reported their preclinical findings from a blinded, retrospective analysis of over 350 patients in the November 30, 2012, edition of Cancer Research. The test, the team claims, is superior to several previously published gene tests and to the Gleason scale, which is the rating given to prostate cancer based upon its A microscopic appearance and currently used to help evaluate the prognosis of men with the disease. The oncogene-specific prostate cancer molecular signatures were recapitulated in human prostate cancer and validated in distinct populations of patients as a prognostic and diagnostic test. In addition, the team demonstrated how the isogenic prostate cancer cell lines metastasized in immune-competent mice. “Identification of gene signatures in breast cancer has allowed for a deeper understanding of the disease, and this paper moves us steps closer to being able to follow a similar trajectory with prostate cancer. Today, such an understanding and a formidable testing ground for new therapies is lacking for this disease,” Dr. Pestell said. “With this new oncogene-specific prostate cancer molecular signature, we have a valuable prognostic and diagnostic resource that could help change the way we manage and treat prostate cancer.” VISIT US AT: Booth: 3757 bnormal screening coagulation tests are frequently observed in asymptomatic patients with multiple myeloma and other plasma cell neoplasms. Prothrombin time (PT), activated partial thromboplastin time (APTT) and fibrinogen activity have been linked with clinical history and disease parameters in patients with plasma cell dyscrasia. Scientists at the University of Arkansas for Medical Sciences (Little Rock, AR, USA; www.uams.edu) studied coagulation tests in a total of 252 patients. Of these, 79 patients (31%) had abnormal routine screening coagulation test results. An isolated prolonged PT of greater than 15 seconds was found in 62 patients (25%), and 10 patients had prolonged PT and APTT (4%). Prothrombin time, APTT, and fibrinogen activity were analyzed on the STA-R Evolution, using PT reagent Neoplastine CI PLUS and APTT reagent STA-PTT A, all products of Diagnostica Stago (Parsippany, NJ, USA; www.stago-us.com). Fibrinogen activity was determined by measuring the clotting time of diluted plasma in the presence of excess thrombin with a reference range of 197–447 mg/dL. The quantitation of monoclonal proteins was performed by separating serum proteins using capillary electrophoresis with direct protein detection by UV absorbance at 200 nm. An isolated prolonged PT was the A LINKXPRESS COM LINKXPRESS COM LMI-07-13 128 most common abnormal coagulation test found in 25% of the patients. A prolonged PT was more frequently observed in 157 patients with the multiple myeloma compared to the 34 monoclonal gammopathy of undetermined significance (MGUS) patients or other diagnostic categories of plasma cell dyscrasia. There were no differences immunoglobulin isotype in 62 patients with isolated prolonged PT compared to the 173 patients with normal screening coagulation tests. Fibrinogen activity was significantly lower in patients with prolonged PT although there was no correlation between fibrinogen activity and PT. Serum M protein concentrations were significantly greater in patients with prolonged PT and were positively correlated with PT. Serum M protein concentrations were significantly elevated in patients with prolonged PT compared to patients with normal PT and were positively correlated with PT values. The authors concluded that there was an association between disease severity and prolonged PT in that patients with multiple myeloma were more likely to have prolonged PT than patients with other plasma cell neoplasms. Of the factors examined, the monoclonal protein level was significantly higher in patients with isolated prolonged PT and correlated with PT. The study was published on December 7, 2012, in the International Journal of Laboratory Hematology. LMI-07-13 124 LabMedica International June-July/2013 28 LabMedica for daily laboratory medicine news click to www.labmedica.com Hemocytometers Evaluated for Peritoneal Fluid Cell Counts he diagnostic performance of different automated hemocytometers for white blood cell (WBC) enumeration of peritoneal fluids was compared with manual microscopy analysis. The term ascites is conventionally used for designating the accumulation of fluid in the peritoneal cavity and the presence of elevate numbers of WBCs and polymorphonucleated leukocytes (PMNs) is pivotal to diagnose spontaneous bacterial peritonitis (SBP). Scientists at the Academic Hospital of Parma (Italy; www.ao.pr.it) analyzed 100 peritoneal fluids with manual microscopy and five automated hemocytometers. Manual microscopic analysis was carried out using Nageotte and Fuchs-Rosenthal chambers after staining with Turk’s and May-Grünwald–Giemsa reagents. The five automated counters were the XE-2100 and XE-5000 (Sysmex; Kobe, Japan; www.sysmex.com); the Advia 2120 (Siemens; Erlangen Germany; healthcare.siemens.com); the BC-6800 (Mindray; Mahwah, NJ, USA; www.mindray.com); and the Abbott Sapphire (Abbott Park, IL, USA; www.abbottdiagnostics.com). The XE-2100 is a flow cytometer, using forward-scattered and side-scattered light, whereas the WBC differential entails a specific nucleic acid dye to measure the cells by side-fluorescent light and side-scattered light. The analysis of WBC as performed on the XE-5000 is with a flow cytometry technique by means of a semiconductor laser and fluorescent measurement. For manual microscopy the mean values in the 100 peritoneal fluids was 873 WBC/mm3, compared to 943 WBC/mm3 for the XE-2100 and 741 WBC/mm3 for XE-5000. For the Advia 2120, the mean was 741 WBC/mm3, while for the BC-6800 it was 938 WBC/mm3 and 782 WBC/mm3 for the Sapphire. There were no significant differences between the different counts and therefore correlations were highly significant. The agreement between manual analysis and flow cytometry at the diagnostic threshold for septic peritonitis with a count equal to or greater than 1000 WBC/mm3, was 99% for XE-2100, XE-5000, Advia 2120, BC-6800 and 96% for Sapphire. The authors concluded that used for routine analysis of body fluids the T 29 LabMedica International June-July/2013 five hemocytometers tested display acceptable performance for routine screening of peritoneal fluid. Higher correlations with manual microscopy were found for the two Sysmex analyzers although those of the Advia 2120, BC-6800 and Sapphire were still excellent. The study was published in the January 2013 issue of the journal Clinical Biochemistry. Image: The XE-5000 automated analyzer (Photo courtesy of Sysmex). VISIT US AT: Booth: 3669 LINKXPRESS COM LMI-07-13 129 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Whole Genome Sequencing Better at Tracing TB Outbreaks study revealed that a new form of genetic testing of the bacteria that cause tuberculosis (TB) provides better information on TB transmission and thus allows tracing of TB outbreaks more accurately than the current standard tests. A team of experts from public-health institutions, research institutes, and universities in Germany and France led by Stefan Niemann from the Forschungszentrum Borstel (Borstel, Germany; www.fz-borstel.de) compared the results of the two types of tests on 86 Mycobacterium tuberculosis isolates from a TB outbreak in the German states Hamburg and Schleswig-Holstein (overall 2301 TB cases have been investigated in the study period from 1997 to 2010). They found that the new test, based on the sequencing of the respective whole genomes (i.e., whole genome sequencing, WGS) provided more accurate information on clustering and temporal spread of the pathogen than the standard tests, which are based on the analysis of small genome regions (classical genotyping). Importantly, while standard tests were not able to distinguish the strains involved, WGS-based analyses revealed that only a particular clone started spreading at the onset of the outbreak, suggesting that subtle differences in the genome A might influence the success of pathogen transmission. “Only genome based investigations allowed us to trace the spread of M. tuberculosis with the resolution needed to visualize transmission patterns correctly,” said Dr. Andreas Rötzer, first author of the study. Genotyping of M. tuberculosis strains is usually used to detect TB outbreaks and guide tracing contacts of TB cases. However, standard genotyping analyses only tiny parts of the genome, and may therefore not be able to distinguish between closely related strains spreading in distinct transmission chains. This was confirmed by this study: WGS-based typing discriminated better the different strain variants involved in the outbreak, was in better agreement with information on known contacts between the patients, and allowed the investigators to more precisely follow the spread of clones over space and time. Based on the genome sequencing data, the authors were also able to estimate that the genome of M. tuberculosis evolves in its natural host population (infected individuals) at a slower mutation rate than other bacterial pathogens (0.4 mutations per genome per year). This measure of the bacterium’s mutation rate will be use- ful to trace future outbreaks and estimate when and via which individual they originated. An additional advantage of WGS compared to standard genotyping is that WGS allows the identification of mutations of bacterial genes causing antibiotic resistance mutations and variations in virulence genes. This is especially important as M. tuberculosis strains that are resistant to the most potent drugs are increasingly emerging in several world regions and rapid detection of resistance is crucial for successful treatment. The costs of whole genome analysis based on Next Generation Sequencing are declining; therefore, this test could soon become the standard method for identifying transmission patterns and rates of infectious disease outbreaks. In addition, the authors state: “We envision that the progressive effective implementation of WGS for Public Health and medical diagnostics will also be accelerated by the broader distribution of more accessible and flexible sequencing machines, and upcoming bioinformatics developments to facilitate quick and relevant interpretation of the resulting data by the clinical and medical staff.” The study was published in PLOS Medicine on February 12, 2013. Serological Assay Assessed for Dyspepsia Patients commercial panel of assays provides an algorithm, which indicates stomach health and the function of the gastric mucosa. The assay, known as GastroPanel, is performed with a simple blood test that can be used to assess the condition of the gastric mucosa and to confirm the diagnosis of hypochlorhydria and indicate whether the changes in the mucosa are due to a chronic inflammatory condition. The scientists at Quest Diagnostics (Heaton, UK; www.questdiagnostics.com) have used GastroPanel to examine 181 patients whose ages ranged from 19 to 75 years, with a median of 41 years. Of these, 105 (60.7%) were Japanese, 53 (30.6%) were European, and the remaining 15 (8.7%) were an assortment of ethnicities. Of particular note among the Japanese group was the receipt of samples from 23 husband and wife couples. GastroPanel evaluates for pepsinogen I and II, gastrin 17, and antibodies to Helicobacter pylori infection, but does not identify the organism. Of the 181 samples tested by the GastroPanel (Biohit Oyj; Helsinki, Finland; www.biohithealthcare.com), A LINKXPRESS COM 115 (68.4%) showed no abnormalities in the samples and were reported as normal function of gastric mucosa. Thirty-six samples (20.7%) were positive for H. pylori alone and a report was issued with a recommendation to return to their doctor and start an appropriate course of antibiotics. The remaining 30 samples showed a range of abnormal results. Only 27 (14.9%) patients were over 50 years of age, 18 of which were reported as normal, four were positive for H. pylori alone, four showed increased pepsinogen I levels and the last sample, from a 51-year-old Japanese woman, was positive for both H. pylori and pepsinogen I. The authors concluded that the GastroPanel assay can be used to diagnose H. pylori infection and atrophic gastritis, and to estimate the risks associated with these conditions. Approximately half of the gastroscopies performed show healthy gastric mucosa and therefore the GastroPanel assay could save the patient from unnecessary discomfort and also reduce unnecessary healthcare costs. The study was published in December 2012 in the British Journal of Biomedical Science. LMI-07-13 130 LabMedica International June-July/2013 30 LabMedica for daily laboratory medicine news click to www.labmedica.com Solid Media Used to Isolate Leptospira solation of Leptospira, from clinical samples and testing of antimicrobial susceptibility are difficult and time-consuming. Pathogenic Leptospira are slow-growing Gram-negative spirochetes and a new solid medium that facilitates more-rapid growth of these organisms has been developed. Microbiologists at the Mahidol University (Bangkok, Thailand; www.mahidol.ac.th) developed the new solid medium, called LVW agar, by testing the effects of combinations of ingredients and incubation conditions. All recipes contained three core ingredients and a variable concentration of two additional ingredients. A total of 109 pathogenic Leptospira isolates were used during the development and evaluation of the new solid medium and Etest, which is well-established method for antimicrobial resistance testing, antibiotic susceptibility testing in microbiology laboratories around the world. The medium was developed by evaluating the effects of numerous factors on the growth rate of a strain of Leptospira interrogans. These included the type of base agar, the concentration of rabbit serum (RS), and the concentration and duration of carbon dioxide incubation during the initial period of culture. The highest growth rate of this strain was achieved using a Noble agar base supplemented with 10% RS and named LVW agar, with an initial incubation at 30 °C in 5% CO2 for two days prior to continuous culture in air at 30 °C. These conditions were used to develop the Etest for three species, L. interrogans, L. kirschnerii, and L. borgpetersenii. The minimum inhibitory concentrations (MICs) were read on day seven for all samples. The validated Etest methodology was performed for 109 Leptospira isolates with five antimicrobial drugs, penicillin G, doxycycline, ceftriaxone, cefotaxime, and chloramphenicol. The MIC90 values were as follows: penicillin G, 0.064 units/mL; doxycycline, 0.19 μg/mL; cefotaxime, 0.047 μg/mL; ceftriaxone, 0.5 μg/mL; and chloramphenicol, 2 μg/mL. Leptospirosis is a zoonotic disease that has a worldwide distribution but has the greatest impact on health in developing countries, where it is often grossly under recognized. The authors concluded that LVW agar that enables rapid growth, isolation of single colonies, and simple antimicrobial susceptibility testing for Leptospira species will become widely used in diagnostic microbiology laboratories, but especially in resource-limited settings. The study was published in the January 2013 issue of the journal Antimicrobial Agents and Chemotherapy. I Image: Leptospira interrogans bacterium (Photo courtesy of Science Photo Library). 31 LabMedica International June-July/2013 VISIT US AT: Booth: 3614 LINKXPRESS COM LMI-07-13 131 PRODUCT NEWS To receive prompt and free information on products, log on to www.LinkXpress.com or fill out reader service form located on last page HEMOGLOBIN MEASUREMENT DEVICE qPCR MACHINE Ceragem The DA7600 qPCR is designed for ease of use, accuracy, and user reliability. The system is considered ideal for laboratories and test centers that require both enhanced performance and cost-effectiveness. The Cera-Chek Hb Plus is designed to accurately measure hemoglobin levels with as little as 1 μL of blood within five seconds. The detection strips are divided into a grip part and a detecting part, to avoid the possibility of blood contamination. LINKXPRESS COM LMI-07-13 205 Daan Gene LINKXPRESS COM LMI-07-13 206 CLINICAL CHEMISTRY SYSTEM PROTEIN ANALYZER ELITech Group The Nephstar is a bench-top nephelometric analyzer for rapid quantitative measurements of specific proteins in blood or urine samples. Key benefits include automatic calibration and blanking, temperature-controlled reaction chamber, and results available in three minutes or less. The Selectra ProM is designed for primary, STAT or backup testing needs, and offers a throughput of up to 266 tests per hour. The system requires minimal maintenance, and offers an effective use of consumables to reduce operating costs. LINKXPRESS COM LMI-07-13 207 Goldsite Diagnostics LINKXPRESS COM LMI-07-13 208 Urinary Enzyme Levels Correlate with Prediabetic Plasma Glucose rinary N-acetyl-β-D-glucosaminidase (NAG) excretion is increased in patients with impaired glucose tolerance (IGT). During the oral glucose tolerance test (OGTT) the plasma glucose, urine glucose, and insulin levels correlate strongly with urinary NAG levels in prediabetic subjects. Scientists at the Nippon Medical School (Tokyo, Japan; www.nms.ac.jp) performed OGTTs on 33 men and 47 women, aged 18 to 79 years, who were not yet diagnosed with diabetes mellitus (DM), and in whom HbA1c levels were equal to or greater than 6.8%. The study was carried out from December 2005 through August 2010. Urinary NAG levels were measured spectrophotometrically with sodio- U LINKXPRESS COM metacresolsulfonphthaleinyl- N-acetylβ-D-glucosaminide as a substrate (NAG assay kit, Shionogi & Co.; Osaka, Japan; www.shionogi.co.jp). Urinary glucose levels and serum creatinine (Cr) levels were measured with enzymatic assays. The serum levels of cystatin C were measured with the N Latex Cystatin C kit (Siemens Healthcare Diagnostics, Inc., Marburg, Germany; www.medical.siemens.com) and the fully automated particle-enhanced nephelometric immunoassay. Forty-two subjects had normal glucose tolerance (NGT), 31 had impaired glucose tolerance (IGT), and seven had DM. NAG levels were significantly higher in subjects with DM and in subjects with IGT than in subjects with NGT. Urinary NAG in the DM group was 8.53 ± 4.96 U/g UCr, which was LMI-07-13 132 elevated compared to the NGT group, which ranged from 5.40 ± 3.82 U/g UCr. The IGT group’s range was 6.60 ± 2.88 U/g UCr, which was also significantly higher than the nondiabetic group. The NAG level was positively correlated with plasma glucose levels at 120 minutes of the OGTT and was associated with the glycemic status of prediabetic patients. The authors concluded that that the urinary excretion of NAG with other urinary enzymes in the prediabetic state is an appropriate biomarker for screening for prediabetic renal dysfunction. Their results suggest that postprandial hyperglycemia is an independent factor that causes renal tubular damage in prediabetes patients. The study was published on November 9, 2012, in the Journal of Clinical Laboratory Analysis. Rapid Malaria Diagnostic Test Evaluated in Asia apid diagnostic tests (RDT) for malaria have been brought into field operations to supplement and in some cases replace the gold standard of light microscopy. Although attempts have been made to augment or even replace microscopic diagnosis of malaria with enzymelinked immunosorbent assays (ELISA), real time, and conventional polymerase chain reactions (PCR), these are not feasible in the field. Scientists at the International Centre for Diarrhoeal Disease Research, Bangladesh (ICDDR,B; Dhaka, Bangladesh; www.icddrb.org) collected whole blood samples from 372 febrile patients referred for malaria diagnosis by clinicians from May 2009 to December 2010. The samples were assayed by a newly available RDT and were compared to microscopy adjusted with nested PCR as the gold standard. DNA extraction for the PCR was prepared using QiaAmp blood mini-kit (Qiagen; Hilden, Germany; www. qiagen.com) from preserved whole blood. Other PCR reagents were obtained from New England BioLabs Inc.; R Ipswich, MA, USA; www.neb.com). The RDT device evaluated was the Onsite (Pf/Pan) RDT produced by CTK Biotech Inc. (San Diego, CA, USA; www.ctkbiotech.com) which has the ability to detect Pan-specific lactate dehydrogenase (pLDH) and Plasmodium falciparum specific histidine-rich protein 2 (HRP-2). Of these 372 patients, 229 (61.6%) tested positive for malaria infection detected by microscopy and nested PCR. The OnSite (Pf/Pan) RDT was 94.2% sensitive and 99.5% specific for P. falciparum diagnosis and 97.3% sensitive and 98.7% specific for P. vivax diagnosis. Sensitivity varied with differential parasite count for both malaria species. The authors concluded that the OnSite (Pf/Pan) RDT, a lateral flow chromatographic immunoassay, performed satisfactorily in standard laboratory conditions. It can be utilized for diagnosis of symptomatic malaria as well as to discriminate falciparum malaria infection from vivax malaria in endemic areas and during outbreaks. The study was published on December 12, 2012, in the Malaria Journal LabMedica International June-July/2013 32 LabMedica for daily laboratory medicine news click to www.labmedica.com Noninvasive Prenatal Test Screens Blood for Chromosomal Abnormalities cont’d from cover DNA testing is one option that can be used as a primary screening test in women at increased risk of aneuploidy. It may also be offered as a follow-up test for women with a positive first-trimester or second-trimester screening test result. The noninvasive prenatal test has been developed and validated by Natera, Inc. (San Carlos, CA, USA; www.natera.com). Physicians will be able to forward specimens for testing to Natera’s Clinical Laboratory Improvement Amendments (CLIA)-certified laboratory. The test will be made available to physician clients of Quest Diagnostics (Madison, NJ, USA; www.questdiagnostics.com) in certain regions in March and nationwide in the United States in April 2013. A “low risk” Panorama test result indicates a lower likelihood that a pregnancy is affected. With this information, a woman may consider, in consultation with her physician and results of other medical assessments, whether to pursue or forgo invasive diagnostic testing, which carries a slight risk of miscarriage. A “low risk” Panorama result does not guarantee an unaffected pregnancy. “Cell-free fetal DNA testing is a significant advance in prenatal screening,” said Charles Strom, MD, PhD, senior medical director, genetics, Quest Diagnostics Nichols Institute. “By offering physicians and women access to Panorama, Quest Diagnostics is delivering on its commitment to provide clinically important innovations aligned with guideline-based care.” Natera is a leading genetic testing company that has developed a proprietary bioinformatics-based technology (NATUS) to deliver accurate and comprehensive high-throughput testing for reproductive indications from minute quantities of DNA. Natera operates a CLIA-certified laboratory in San Carlos (CA, USA) providing a host of preconception and prenatal genetic testing services. Image: The Panorama test is designed to screen for chromosomal abnormalities, such as trisomy 21 (Photo courtesy of the Global Down Syndrome Foundation). V I S I Booth: 1648 T LINKXPRESS COM R E A D E R S E R V I C E VISIT US AT: ® P O R T A L Renew / Start your Free Subscription Access Interactive Digital Magazine Instant Online Product Information: 1 2 3 33 Identify LinkXpress ® codes of interest as you read magazine Click on LinkXpress.com to reach reader service portal Mark code(s) of interest on LinkXpress ® inquiry matrix LabMedica International June-July/2013 LINKXPRESS COM LMI-07-13 133 PRODUCT NEWS To receive prompt and free information on products, log on to www.LinkXpress.com or fill out reader service form located on last page LAB SYSTEMS BIOCHEMISTRY ANALYZER Hitachi Aloka Medical Horron XLH Medical Electronics The LabFLEX3500 Series is a variety of systems that can be configured by combining functional modules to suit the needs, size, and operational methods of facilities. The systems also allow for the configuration of a transport option for specific layout and conditions of a facility. The semiautomatic biochemistry analyzer features multicolor touch screen operation and intelligent software options. Both flow cell and cuvette can be used, and the system can display real-time reaction graph, and print out QC reports. LINKXPRESS COM LMI-07-13 209 LINKXPRESS COM LMI-07-13 210 CHEMILUMINESCENCE IMMUNOASSAY SYSTEM CHEMISTRY ANALYZER SNIBE The URIT-8021A features durable syringes to ensure accuracy and precision, along with an auto-washing system to reuse cuvettes. Other benefits include automatic stop/ alarm, liquid level protection, collision protection, and a throughput of 200 tests per hour. The Maglumi 600 features options such as three modes of operation, sample loading for up to 16 sample tubes, four reagents on board, and clot detection. The system is considered ideal for IVD, with a throughput of up to 180 tests per hour with first results available in only 12 minutes. LINKXPRESS COM LMI-07-13 211 URIT LINKXPRESS COM LMI-07-13 212 Blood Test Identifies Mortality Risk for Trauma Patients simple, inexpensive blood test performed on trauma patients upon admission can help doctors easily identify patients at greatest risk of death. A computerized tool that combines factors like age, gender, and common blood tests known as the complete blood count (CBC) and the basic metabolic profile (BMP) can determine an individual’s mortality risk is now available to physicians. Scientists at the Intermountain Medical Center (Salt Lake City, UT, USA; http://intermountain healthcare.org) studied 9,538 patients and discovered that some trauma patients are far more likely to die than others were, regardless of the severity of their original injuries. The Intermountain Risk Score is a computerized tool and has been helpful in evaluating individuals with medical problems like heart failure or chronic pulmonary disease. The benefit of the tool had not been tested for trauma patients hospitalized due to an accident or traumatic injury, rather than an underlying condition. The Intermountain Medical Center used the tool to categorize patients according to high, mod- A erate, and low risk levels. Some surprising findings emerged as high-risk men were nearly 58 times more likely to die within a year than low-risk men were. Men with a moderate risk were nearly 13 times more likely to die than those with low risk. High-risk women were 19 times more likely to die within a year than low-risk women were, and women with moderate risk were five times more likely to die than those with low risk. Sarah Majercik, MD, an Intermountain Medical Center surgeon, said, “As surgeons, we don’t often use all of the CBC results in evaluating a patient who needs surgery for a bleeding spleen or after a motor vehicle accident. There are certain values, such as hemoglobin, hematocrit, and platelets that we scrutinize closely as part of good clinical care, but then other parts, such as the red blood cell distribution width (RDW) that we pay no attention to at all in the acute setting. These factors are generally overlooked, even though they are part of the CBC that every trauma patient gets when he or she arrives in the emergency room.” The study was presented on January 18, 2013, at the 27th annual Scientific Session of the Eastern Association for the Surgery of Trauma held in Phoenix (AZ, USA; www.east.org). Image: Amber Vance, a medical laboratory scientist, works on a complete blood count panel at Intermountain Medical Center (Photo courtesy of Ravell Call, Deseret News). Novel Immunoassay Evaluated for Cardiac Troponin he analytical performance of an immunoenzymometric assay for the cardiac troponin (cTnI) has been appraised and compared with other methods. The test is a two-site immunoenzymometric assay, which uses a combination of two monoclonal antibodies, respectively directed to 41–49 and 87–91 amino acids of the cTnI peptide chain, and the ternary troponin ITC complex as a calibration antigen. Scientists at the Fondazione Toscana G. Monasterio (Pisa, Italy; www.ftgm.it) evaluated the assay in 452 healthy individuals of which 326 were males and 126 were female. The median age was 45 years with a range between 17 to 76 years. The study participants were recruited from laboratory T staff, blood donors, or voluntary subjects, included in screening programs for preventive medicine. The immunoenzymometric assay for the cTnI evaluated in the study was the Tosoh ST AIA-PACK cTnI 3rd-Generation, and it uses the automated AIA-2000 platform (Tosoh Corporation, Tokyo, Japan; www.tosoh.com). The third-generation AIAPack assay for cTnI showed an improved analytical sensitivity and reproducibility, especially at very low cTnI concentrations compared to the previous second-generation AIA-Pack assay. The values of the third-generation assay were a limit of detection (LoD) at 8.7 ng/L and the limit of quantitation (LoQ) at 100 ng/L. The LoD and 10% LoQ values of the second-generation assay reported previously were 38 ng/L and 130 ng/L, respectively. The third-generation AIA-Pack Tosoh assay for cTnI showed a very close agreement throughout all the working range with the Access AccuTnI Beckman–Coulter method (Beckman Coulter, Inc., Fullerton, CA, USA; www.beckmancoulter.com). Close concordance was also demonstrated between the cTnI measured by Tosoh methods and those of cTnT measured with ECLIA Roche method (Roche Diagnostics, Mannheim, Germany; www.roche. com). The authors concluded that their results imply that the third generation AIA-Pack assay is suitable for the clinical evaluation of patients with cardiac diseases. The study was published in the January 2013 issue of the journal Clinica Chimica Acta. LabMedica International June-July/2013 34 LabMedica for daily laboratory medicine news click to www.labmedica.com DNA Test Detects Mutations Across Multiple Genes he first multigene DNA sequencing test that can help predict cancer patients’ responses to treatment has been launched in the United Kingdom. The test uses the latest DNA sequencing techniques to detect mutations across 46 genes that may be driving cancer growth in patients with solid tumors and the presence of a mutation in a gene can potentially determine which treatment a patient should receive. Scientists at the Oxford Biomedical Research Center (UK; www.oxfordbrc.nihr.ac.uk) launched the DNA test for the UK National Health Service (NHS; London, UK; www.nhs.uk). The number of genes tested marks a step change in introducing next-generation DNA sequencing technology into the NHS, and heralds the arrival of genomic medicine with whole genome sequencing of patients just around the corner. The test costs around GBP 300 and could save significantly more in drug costs by getting patients on to the right treatments straightaway, reducing harm from side effects as well as the time lost before arriving at an effective treatment. The test is run on a next generation sequencing platform called the Ion Personal Genome Machine (Life Technologies Corporation, Carlsbad, CA, USA; T www.lifetechnologies.com). The test and accompanying software have been substantially modified as requested by the Oxford team to fulfill diagnostic standards in their laboratory. The scientists have carried out tests and comparisons to verify the robustness of the technique with cancer biopsies direct from patients. The team compared the new 46gene test against conventional techniques for 80 consecutive cancer biopsies in the hospital laboratory’s workflow. The next-generation DNA sequencing method detected all the mutations the conventional method did. It also detected new mutations the conventional method did not, and detected mutations present at much lower levels in the samples. The time taken for the 46-gene test also fitted into the standard turnaround time for samples at the laboratory. The test requires a very small amount of 5 ng of DNA, an advantage when working with clinical samples that are typically limited in quantity. Jennifer Taylor, MD, of the Wellcome Trust Center for Human Genetics (Oxford, UK; www.well.ox.ac.uk) said, “We wanted a test that would use the latest DNA sequencing techniques to detect a wide range of mutations in a wide range of genes. The test should be able to cover more cancers and more treatments, all for a similar cost to conventional methods. It’s a significant step change in the way we do things. This new 46 gene test moves us away from conventional methods for sequencing of single genes, and marks a huge step towards more comprehensive genome sequencing in both infrastructure and in handling the data produced.” Image: The Ion Personal Genome Machine (Photo courtesy of Life Technologies). Biomarkers Found for Metastatic Breast Tumor Cells ome breast tumor circulating cells in the bloodstream are marked by a constellation of biomarkers that identify them as those destined to metastasize in the brain. Sophisticated techniques have been used to test samples of circulating breast tumor cells to identify and characterize the biomarkers that are the signature of the cells destined to seed the brain with a deadly spread of cancer. Scientists at Baylor College of Medicine (Houston, TX, USA; www.bcm.edu) collected blood samples from 38 patients with metastatic or nonmetastatic breast cancer. Isolated peripheral blood mononuclear cells (PBMCs) were separated, analyzed, and sorted with the BD FACSAria II 3Laser high-speed sorting S flowcytometer (Becton Dickinson; Franklin Lakes, NJ, USA; www.bd.com ). The circulating tumor cells were cultured and injected into animals. Total ribonucleic acid (RNA) from the PBMCs was amplified by real time polymerase chain reaction. The biomarkers identified by the scientists included human epidermal growth factor receptor 2 (HER2+), epidermal growth factor receptor (EGFR), heparanase (HPSE) and Notch1, a single-pass transmembrane receptor. Together, these four proteins, previously known to be associated with cancer metastasis, spell out the signature of circulating tumors cells that travel to the brain. The scientists did not find evidence of the epithelial cell adhesion molecule (EpCAM). The study not only identifies a novel signa- ture of circulating tumor cells, it shows the limitations of currently approved platforms used to identify cancer in this way. Analyzing such cells can help scientist understand how the disease spreads, which may be an initial step in developing new methods of treating metastatic disease. Dario Marchetti, PhD, professor of pathology and lead author said, “We don’t claim that these biomarkers are the only important ones. We hope to find novel markers in brain metastasis that will make diagnosis and monitoring even more targeted.” The investigators are also trying to find ways to link these circulating tumor cells back to the signature of the original or primary tumor. The study was published on April 10, 2013, in the journal Science Translational Medicine. Flow Cytometry Assay Measures NK Cell Function eripheral blood natural killer (NK) cell function in healthy adults has been assessed using the target-induced NK loss (TINKL) assay. The TINKL assay is a sensitive flow cytometrybased assay for measuring NK cell function; its clinical application has been evaluated and the activity measured, which is independent of the number of NK cells in the assay. Immunologists at The Canberra Hospital (Garran, ACT, Australia; www.canberrahospital. act.gov.au) collected blood from 70 healthy adult male, and 53 healthy female volunteers. Their mean age (± standard deviation) was 38 ± 11 years, ranging from 19 to 65 years. Venous blood was collected in vacutainers containing ethylenediaminetetraacetic acid (EDTA), and samples were processed within 24 hours. Peripheral blood mononuclear P 35 LabMedica International June-July/2013 cells (PBMC) were isolated, cryopreserved, and stored in liquid nitrogen. On the day prior to assay, PBMC were thawed and maintained in culture overnight. The TINKL assay, conducted using NK-sensitive erythroleukaemic cell K562, was used to measure natural killing, and the NK-resistant Raji B lymphoblastoid cell in the presence of the CD20 monoclonal antibody Rituximab was used to measure antibody-dependent killing. Peripheral blood NK cell function measured by the TINKL assay was assessed in repeated samples of 123 healthy adults. The PBMC were assayed in 21 trials over a three-month period. NK loss was 31% ± 10% (range 7% to 55%) as a consequence of natural killing, and 39% ± 10% (range 14% to 64%) as a consequence of antibody-dependent killing. The variation in NK cell function in the population measured by the TINKL assay is greater than can be accounted for by interexperimental variability. The intraexperimental coefficient of variation (CV) was on average 11% for natural killing and 3% for antibody-dependent killing, compared to 14% and 9% respectively for the interexperimental variation. The authors concluded that their data provides additional information on the TINKL assay relevant to testing NK cell function in a clinical setting. The intra-experimental variability and the inter-experimental variability of the assay have been quantified, and the large range in NK cell function in a population of healthy donors is now chronicled. The study was published on April 6, 2013, in the Journal of Immunological Methods. VISIT US AT: Booth: 4263 LINKXPRESS COM LMI-07-13 136 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Blood Protein Detects Higher Risk of Cardiovascular Event blood protein is able to detect higher risk of cardiovascular events in people with chest pain originating from heart disease. Higher levels of pregnancy-associated plasma protein A (PAPP-A) is associated with an increased risk of cardiovascular events in people with cardiac chest pain that developed as a result of heart disease and/or coronary artery disease. Scientists at the University of Tubingen (Germany; www.uni-tuebingen.de) conducted a study of 2,568 patients to determine if the presence of PAPP-A could help predict cardiovascular events. The study included patients who visited hospital with cardiac chest pain between December 2007 and April 2009. Serum PAPP-A values were analyzed using an automated immunofluorescent assay (Kryptor PAPP-A, Thermo Fisher Scientific, BRAHMS GmbH; Hennigsdorf, Germany; www.thermoscientific. com). More than half (52%) of patients had stable angina and the remaining 48% had acute coronary syndrome. The normal serum value for men and A Image: Pregnancy-associated plasma protein-A (PAPP-A) is a protein produced by both the embryo and the placenta, and is associated with an increased risk of cardiovascular events (Photo courtesy of TheVisualMD). nonpregnant women is less than 14 mIU/L. Serum levels in patients who had cardiovascular events in the three months following initial hospital admission, such as a heart attack, myocardial infarction, stroke or death, were higher at 62 ± 156 mIU/L, compared with those who did not at 21 ± 23 mIU/L. The optimal prognostic cutoff value was a PAPP-A level of 34.6 mIU/L. Stephan von Haehling MD PhD, a coauthor from the Charité Medical School (Berlin, Germany; www.charite.de), said, “PAPP-A remained a significant independent predictor of major cardiovascular events and remained the strongest predictor of major cardiovascular events when we restricted the analysis to patients with stable angina, and when we restricted it to patients with acute coronary syndrome.” The authors concluded that higher levels of serum PAPP-A were independently associated with an increased short-term risk of cardiovascular events in patients presenting with cardiac chest pain. The study was published on March 18, 2013, in the journal Canadian Medical Association Journal. Genetic Markers Predict Alzheimer’s Disease buildup of certain proteins in the brain and spinal fluid has an increased likelihood of people developing Alzheimer’s disease. Mutations identified in certain genetic regions influence the levels of these protein accumulations and this may help identify people most at risk of developing Alzheimer’s disease well before they show signs of cognitive decline. A group of scientists collaborating with those at Washington University School of Medicine (St. Louis, MO, USA; www.wustl.edu) measured the proteins tau, ptau, and Aβ42 in cerebrospinal fluid (CSF) in 1,269 individuals. The mean age at enrollment was 78.5 years and 30.9% were male. At the last evaluation, 24.9% met clinical diagnostic crite- A ria for AD and 21.8% had mild cognitive impairment. The samples were genotyped using Illumina chips (San Diego, CA, USA; www.illumina.com). A genetic region identified by the group includes the Alzheimer’s disease gene triggering receptor expressed on myeloid cells 2 (TREM2), which encodes a cellular receptor and other genes in TREM2’s family, including Trem-like transcript 1 protein (TREML2). Alison Goate, PhD, of the Washington University School of Medical School, said, “Tau is an important biomarker of neurodegeneration in Alzheimer’s disease, present as insoluble aggregates in the brain and as soluble protein in the cerebrospinal fluid. We have identified several genes that influence the levels of soluble tau in the cerebrospinal fluid, and we show that one of these genes also influences risk for Alzheimer’s disease, rate of cognitive decline in Alzheimer’s disease, and density of tangle pathology in the brain.” Carlos Cruchaga, PhD, the first author of the study said, “Interestingly, although these genes are similar, the associations of TREM2 and TREML2 with cerebrospinal fluid tau levels were in the opposite direction, one associated with risk for Alzheimer’s disease and the other protective.” The authors concluded that using a genome-wide association study they were able to identify the risk variants for Alzheimer’s disease by measuring the levels of tau in the CSF. The study was published on April 4, 2013, in the journal Neuron. Blood Test Confirms Negative Mammography, Detects Missed Cancer rapid, accurate, and cost-effective blood test measures disease-specific autoantibodies to detect the presence of breast cancer. The Octava Pink breast cancer test is produced by Eventus Diagnostics (EventusDx, Miami, FL, USA; Ora, Israel; www.eventusdx.com). The company plans to commercialize its products in collaboration with corporate partners in the US, Europe, and Asia. Octava Pink is intended for confirmatory use in women who have received negative mammography results. The National Cancer Institute (NCI; Frederick, MD, USA; www.cancer.gov) estimates that screening mammograms miss about 20% of breast cancers that are present at the time of the procedure, leading to false negative results. Studies suggest that the Octava Pink test accurately confirms true negative mammography results, while identifying the presence of cancer in more than half of the cases when the mammography result is a false negative and cancer is actually present. EventusDx is partnering with breast cancer spe- A cialists in Italy and Israel to make Octava Pink available on a pilot basis. The Octava technology has been verified in clinical trials in over 800 women conducted at major cancer centers in Israel, Italy, and the US. “We developed Octava Pink to address a serious shortcoming of mammography – the high rate of false negative results,” said Prof. Benjamin Piura, MD, FRCOG, CMO of EventusDx and professor emeritus of obstetrics and gynecology at BenGurion University of the Negev. “The Octava technology has demonstrated encouraging specificity and sensitivity levels in multisite clinical testing in over 800 women. We expect that Octava Pink will identify at least half of all breast cancers in women who were mistakenly given negative mammography results, while providing welcome reassurance to women whose negative results are accurate.” Octava Pink can also address core needle breastbiopsy results that are false negatives, estimated at about 5% of biopsies. Confirming negative biopsy results with Octava Pink should detect at least half of those cases where cancer is actually present, triggering additional diagnostic testing and treatment when appropriate. Octava Pink may also be useful to physicians caring for women who will not or cannot receive mammograms. EventusDx has received the CE mark designation for the Octava Pink breast cancer test. “Receiving CE marking for Octava Pink is an important milestone for our company,” said Alon Hayka, president of EventusDx in Israel. “Octava Pink is designed to reassure women with true negative mammograms and to enable earlier diagnosis and treatment of breast cancer in women receiving false negative results.” Eventually EventusDx intends to apply its technology to develop blood tests for the detection of additional cancers, including lung, colon, prostate, and ovarian cancers. The company plans to commercialize its products in collaboration with corporate partners in the US, Europe, and Asia. LabMedica International June-July/2013 38 LabMedica for daily laboratory medicine news click to www.labmedica.com Mobile Device Performs Laboratory-Quality HIV Testing low-cost mobile device has been engineered that combines cell phone and satellite communication technologies with fluid miniaturization techniques and performs all essential enzyme-linked immunosorbent assay (ELISA) functions. The device combined the portability of mobile technology with the detection potential of enzyme-linked antibodies to create a fully automated and portable microfluidic device dubbed the “mChip,” and has been tested in an African setting. A team of scientists including those at Columbia University (New York, NY, USA; www.columbia.edu) who invented the device assessed its ability to perform serodiagnostic testing for human immunodeficiency virus (HIV) in a field setting and synchronize the results in real time with electronic health records. They tested serum, plasma, and whole blood samples collected in Rwanda and on a commercially available sample panel made of mixed antibody titers. The handheld apparatus, which is a mobile microfluidic chip for immunoassay on protein markers (mChip) device, captures the essential functions of ELISA as performed by pipetting robots, microplate readers, desktop computers, and communication hardware. The device does not need gridbased power and is sufficiently low in cost and energy consumption to be suitable for resource-limited settings. ELISA is the most sensitive and commonly used laboratory diagnostic for HIV, and historically has taken hours and sometimes days to provide a result. The mChip device, however, produces a result in just 15 minutes. To explore the performance of the mChip device on coinfected samples, the team evaluated the HIV accuracy of the mChip device on 167 Rwandan patient samples. Also, 100 plasma samples from Rwandan patients were tested for hepatitis B and C (HBV and HCV), as well as 67 serum samples from patients who were also tested for syphilis and herpes simplex virus (HSV2). Despite the high prevalence of viral hepatitis, 99 positive for HBV and/or HCV in the sample set and the substantial number of sexually transmitted infections, 31 positive for syphilis and/or HSV-2, the diagnostic sensitivity of the mChip device was high at 100%, as was the diagnostic specificity at 99%, with only two false positives. Samuel K. Sia, PhD, a bioengineer and the senior author of the study, referring to the data repository that doctors can access, said, “Now, with a A 39 LabMedica International June-July/2013 single push of a button, there is automation not only from the sample to the result, but to the synchronization of data to the cloud. This automation is very important because it minimizes user error and user variability. The real power is that one finger prick can give you multiple rapid test results, making it cheaper and more convenient.” The cost of the device is estimated at USD 100. The study was published on January 17, 2013, in the journal Clinical Chemistry. Image: Prof. Sam Sia’s mobile device speeds up diagnostic testing for HIV and more. It can easily be used in remote areas around the world. The mChip mobile device is on the left, with a satellite communication modem on the right (Photo courtesy of Columbia Engineering). VISIT US AT: Booth: 4511 LINKXPRESS COM LMI-07-13 139 PRODUCT NEWS To receive prompt and free information on products, log on to www.LinkXpress.com or fill out reader service form located on last page HbA1c TEST VENTED ENCLOSURES LAB DETECTION SYSTEM RAPID HIV TEST Abbott Diagnostics Air Science Curetis The ARCHITECT clinical chemistry Hemoglobin A1c (HbA1c) test is designed to help physicians in diagnosing and monitoring diabetes, as well as identify patients at risk for developing diabetes. The assay is designed for use on the ARCHITECT c8000 and c4000 systems. The series of vented enclosures provide containment of airborne particulates during manipulation and transfer of potent compounds. Features include turbulent-free airflow pattern, custom sizes, HEPA-filter technology, ductless design, and an easy-tochange filtration system. The Unyvero system is designed for the detection of a broad panel of bacteria and antibiotic resistances from a single sample in one run. The versatile system processes a disposable cartridge, providing the necessary reagents to complete the analysis from sample to result. Diagnostic Automation/Cortez Diagnostics LINKXPRESS COM LMI-07-13 213 LINKXPRESS COM LMI-07-13 214 LINKXPRESS COM LMI-07-13 215 The OneStep HIV 1&2 Serum/WB/ Plasma RapiCard InstaTest is a single-use device for qualitative detection of antibodies to HIV in blood, serum, and plasma samples. The test offers a specificity of 100% and a sensitivity of 99.4%. LINKXPRESS COM LMI-07-13 216 Novel Test Diagnoses Malaria in Returning Travelers novel, single-amplification polymerase chain reaction (PCR) assay has been used to diagnose malaria among travelers returning from endemic areas. A practical single-round amplification Plasmodium-genus-specific PCR assays has been designed that is based on primers targeting the 18S locus and the mitochondrial genome with sensitivity and specificity equal to nested PCR. Tropical disease specialists at the Haukeland University Hospital (Bergen, Norway; www. helse-bergen.no) carried out a retrospective study of whole blood samples from a cohort of 132 fever patients with potential imported primary or recurrent malaria between 2006 and 2011. The samples had been previously analyzed for malaria parasites on Giemsa-stained, thin and thick slides by experienced microscopists. Three PCR assays, two genus-specific and one species-specific, were assessed in the cohort of patient samples. The mitochondrial PCR products were sequenced in both directions. Among the 135 samples assayed, 28 were A defined as malaria positive by at least two of the methods among microscopy and the three different genus-specific PCR assays. The new mitochondrial PCR was 100% sensitive detecting all 28 positives. At the threshold dilution 0.5 parasites/μL, the sensitivity of the mitochondrial PCR was 97%, that of the single-round, 18S PCR was 93%, and the reference-nested 18S was PCR 87%. Both single-round amplification assays identified all malaria positives diagnosed by nested PCR that had a sensitivity of 96%. Sequencing of the genus-specific mitochondrial PCR products revealed different single nucleotide polymorphisms that allowed species identification of the 28 sequences with following distribution; 20 were Plasmodium falciparum, 6 were P. vivax, 1 was P. ovale, and 1 P. malariae. The microscopists had missed two infections detected by all PCR assays. The authors concluded that the design of PCR programs with suitable parameters and optimization resulted in simpler and faster single-round amplification assays. Both the sensitivity and specificity of the novel mitochondrial PCR was 100% and proved equivalent to the reference nested PCR. Sequencing of genus-specific mitochondrial PCR products could be used for species determination. The study was published on January 22, 2013, in the Malaria Journal. Image: Plasmodium falciparum, the malaria-causing parasite (Photo courtesy of the CDC). Prenatal Testing with Cell-Free DNA Demonstrated Clinical Benefit oninvasive prenatal testing (NIPT) has clinical benefit over conventional prenatal screening tests, and at a price point of USD 795, NIPT demonstrated cost savings to the healthcare system. An analytic model was used to compare NIPT for trisomy 21, which causes Down syndrome, against conventional prenatal screening with first trimester combined or integrated screening for the US population. Modeling was based on a 4 million pregnant women cohort in the US. While NIPT is not as comprehensive as a karyotype, it does not carry a risk of pregnancy loss. This is the first study to evaluate the economic impact of NIPT in a high-risk pregnancy population as recommended by the American Congress of N Obstetricians and Gynecologists (ACOG) and the Society for Maternal Fetal Medicine (SMFM). As compared to conventional prenatal screening, NIPT detected 65%–85% more cases of trisomy 21, reduced invasive procedures by over 95%, and in turn, reduced over 99% of unnecessary fetal loss. The study appeared online on January 28, 2013, in the Journal of Maternal-Fetal and Neonatal Medicine. “The clinical advantages of implementing noninvasive prenatal testing into clinical practice are becoming increasingly clear and this model quantifies the benefit,” said Dr. Aaron Caughey, senior author of the study and chair of Obstetrics and Gynecology at Oregon Health and Sciences University (Portland, OR, USA; www.ohsu.edu). “One of the most striking findings is that NIPT can be cost saving to the US healthcare system at the appropriate price. Few, if any, new technologies can demonstrate both clinical and cost benefit. NIPT represents a healthcare advance to achieve the Triple Aim of improved quality, better access, and lower costs.” Produced by molecular diagnostics company Ariosa Diagnostics, Inc. (San Jose, CA, USA; www.ariosadx.com) the Harmony Prenatal Test equips pregnant women and their healthcare providers with reliable information to make decisions regarding their health, without creating unnecessary stress or anxiety. LabMedica International June-July/2013 40 for daily laboratory medicine news click to www.labmedica.com LabMedica Prostate Cancer Genetic Tests Predicts Prognosis iagnostic and prognostic genetic tests have been developed to better predict prostate cancer survival outcomes and distinguish clinically relevant cancers. The diagnostic test distinguished patients with clinically relevant prostate cancer from normal prostate in men with elevated prostate-specific antigen (PSA) levels, and prognostic tests separate out men who died of prostate cancer versus those who lived. Scientists at the Kimmel Cancer Center (Philadelphia, PA, USA; www.kimmelcancercenter.org) performed a retrospective analysis of over 350 patients using an oncogene-specific prostate cancer molecular signature, based on studies carried out in mice. They worked with three oncogenes previously associated with poorer outcomes in prostate cancer: avian myelocytomatosis viral oncogene homolog (c-Myc), Harvey rat sarcoma viral oncogene D 41 LabMedica International June-July/2013 homolog (Ha-Ras), and sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (v-Src). Canonical analysis was performed using the c-Myc-specific genes that were also found to be differentially expressed between tumor and normal samples in two human prostate datasets. The first canonical variable, resulting from this analysis, was used to discriminate tumor from normal samples in each human prostate dataset. The oncogene-specific prostate cancer molecular signatures were repeated and validated in distinct populations of patients as a prognostic and diagnostic test for human prostate cancer. The c-Myc gene copy number is increased in up to 30% of cases at the preneoplastic stage in patients with prostatic intraepithelial neoplasia. Specifically the tests identified men whose outcome was fatal on average after 30 months. Richard G. Pestell, MD, PhD, the LINKXPRESS COM senior investigator of the study said, “This oncogene signature shows further value over current biomarkers of prediction and outcomes. Such a signature and cell line may also enable the identification of targets for therapies to better treat prostate cancer, which takes the lives of over 27,000 men a year. With this new oncogene-specific prostate cancer LMI-07-13 141 molecular signature, we have a valuable prognostic and diagnostic resource that could help change the way we manage and treat prostate cancer.” The study was published online on November 30, 2012, in the journal Cancer Research. Image: Scanning electron micrograph (SEM) of prostate cancer cells (Photo courtesy of David McCarthy / SPL). LabMedica PRODUCT NEWS To receivedigital prompt and free information products, log on to to read this issue in an interactive magazine format click to on www.LinkXpress.com www.LinkXpress.com or fill out reader service form located on last page CHEMISTRY ANALYZER LAB INFORMATION SYSTEM PROSTATE CANCER TEST Dirui Industrial McKesson Provider Technologies MDxHealth Orphee The CS-T240 auto-chemistry analyzer features a multiple-function sample and reagent disk, as well as a 60 nm probe, liquid level detection, and collision protection. Other benefits include stable performance, LIS/HIS interface, and a throughput of up to 240 tests per hour. The Horizon Lab 13.5 is a standalone lab information system with an EHR module certification for meaningful use stage 2. The system is designed as an integrated, enterprise-wide solution that works for all lab settings, and can be adapted to any healthcare setting. The ConfirmMDx genetic test is designed to differentiate prostate cancer-free men from those who may be harboring occult cancer. The ConfirmMDx, combined with PSA and other risk factors, is intended to improve the diagnosis of prostate cancer and avoid repeat biopsies. The Mythic 22 OT features a TFT color touch screen, built-in numeric keyboard, 22 parameters, two curves, and one scattergram. The system offers enhanced technology, requires a sample volume of less than 17 μL, and can process up to 50 samples per hour. LINKXPRESS COM LMI-07-13 217 LINKXPRESS COM LMI-07-13 218 LINKXPRESS COM LMI-07-13 219 HEMATOLOGY ANALYZER LINKXPRESS COM LMI-07-13 220 Quantification of Marker Mutations in Acute Leukemia imiting dilution polymerase chain reaction (PCR) was developed for quantifying PCR targets. This method was used for the quantification of marker mutations in acute leukemia. By diluting DNA samples so that only one or two copies per well were present and then amplifying those copies with PCR, Prof. Morley and his team at Flinders University and Medical Center (Adelaide, SA, Australia; www.flinders.sa.gov.au) were able to detect two copies of leukemic DNA against a background of 160,000 normal genomes. L The team discovered that the outcome of acute leukemia can be predicted by measuring the response to treatment using limiting dilution PCR to quantify the leukemic cells at high sensitivity. Subsequently Prof. Morley’s Lab used real-time quantitative polymerase chain reaction (qPCR) to develop a highly sensitive method for isolating and quantifying the chromosomal translocation that is typically associated with Chronic Myelogenous Leukemia (CML). Monoquant (Adelaide, SA, Australia; www. monoquant.com.au), a company associated with Flinders University, used the Bio-Rad (Hercules, CA, USA; www.bio-rad.com) QX100 system to refine the new clinical test for CML. Not only does the instrument offer high sensitivity, it also removes variability in amplification efficiency that results from using patient-specific PCR primers, a traditional sticking point for the US Food and Drug Association (FDA; Silver Spring, MD, USA; www.fda.gov). Monoquant hopes the results from the QX100 system will fast track the FDA approval process for its test. Hepatitis C Point-of-Care Tests Highly Accurate oint-of-care tests (POCTs) for the diagnosis of hepatitis C (HCV) have a high level of accuracy and may help increase screening rates for this disease. Convenient, quality-assured, antibody-based rapid diagnostic tests (RDTs) and POCTs could facilitate preliminary screening, although they cannot differentiate between acute and chronic infections P LINKXPRESS COM and their rapid turnaround time limits loss to follow-up and facilitates early associations. Although both diagnostic test types are rapid, RDTs require special equipment, such as centrifuges and refrigerators, whereas POCTs eliminate the need for electricity and are more robust at high temperatures, thus offering additional opportunities to LMI-07-13 142 expand screening. A meta-analysis carried out by scientists at McGill University Health Center (Montreal, QC, Canada; www.muhc.ca) reviewed 19 studies conducted between 1992 and 2012 that screened for HCV in adults. All the studies had evaluated the diagnostic accuracy of POCTs and RDTs that screen for HCV in oral fluid, whole blood, serum, or plasma. The investigators found that POCTs had the highest sensitivity for whole blood at 98.9% and serum or plasma also at 98.9%. The RDTs of serum or plasma had the next-highest sensitivity of 98.4%, followed by POCTs of oral fluid at 97.1%. Specificity of POCTs of whole blood and serum or plasma was also high, at 99.5% and 99.7%, respectively. The specificity of RDTs of serum or plasma followed, at 98.6%, and then the specificity of POCTs of oral fluid, at 98.2%. The authors notes that because the tests evaluated in this meta-analysis detected antibodies to HCV, these POCTs could not differentiate between acute and chronic infections and could not detect infection within three months of exposure. The authors concluded that given the convenience of POCTs and their rapid turnaround time, these results show great potential for expanded first-line screening for hepatitis C infection and demonstrate the utility of blood-based singleton POCTs and of multiplex POCTs designed to provide integrated HIV and HCV screening of at-risk populations. The study was published on October 16, 2012, in the journal Annals of Internal Medicine. LabMedica International June-July/2013 42 LabMedica for daily laboratory medicine news click to www.labmedica.com Genetic Test Reveals Predisposition for Abnormal Blood Clotting he non-O ABO blood type is the most important risk factor for venous thromboembolism, making up 20% of inferred risk for the condition. Individuals with an A or B blood type have an increased risk of venous thromboembolism or blood clots in their veins and myocardial infarction compared with individuals with O blood type. A retrospective study was carried out by scientists at the Copenhagen University Hospital (Denmark; www.rigshospitalet.org) who looked at data on 66,001 people who had been followed for 33 years from 1977 through 2010 to determine whether ABO blood type is associated with an increased risk of venous blood clots in the general population. They determined ABO genotype from single nucleotide polymorphisms (SNP) in the ABO gene. The genotypes T were validated by sequencing. The scientists also measured the following using standard hospital assays: plasma levels of total cholesterol, low-density lipoprotein cholesterol, high density lipoprotein cholesterol, platelets, mean platelet volume, leukocytes, coagulation factors (II, VII, X), international normalized ratio, activated partial thromboplastin time, high-sensitivity C-reactive protein and complement C3. The team found that the risk increased when ABO blood type was combined with factor V Leiden R506Q genotype or prothrombin G20210A genotype. These genetic mutations were associated with an increased risk of venous thromboembolisms. This finding confirms the conclusion of other studies. The scientists also found an 11-fold increased risk of venous thromboembolism for people with the prothrombin G20210A mutation. The population attributable risk of venous thromboembolism was 20% for ABO blood type, 10% for factor V Leiden R506Q and 1% for prothrombin G20210A. Børge G. Nordestgaard, MD, DMSc, a coauthor of the study said, “We found an additive effect of ABO blood type on risk of venous thromboembolism when combined with factor V Leiden R506Q and prothrombin G20210A; ABO blood type was the most important risk factor for venous thromboembolism in the general population.” The authors concluded that ABO blood type should be considered for inclusion in genetic screening for thrombophilia. The study was published February 4, 2013, in the Canadian Medical Association Journal. Molecular Blood Test Detects Colorectal Cancer molecular blood test that identifies changes in DNA associated with colorectal cancer is now available in the United States. The test is designed to aid the detection of colorectal cancer, the third leading cause of cancerrelated deaths, but only 40% of cases are diagnosed in early stages, due to low screening rates. The new test is based on DNA methylation of the Septin9 gene, a proprietary biomarker associated with colorectal cancer that was identified by Epigenomics AG (Frankfurt, Germany; www. epigenomics.com). Epigenomics has demonstrated in more than a half dozen peer-reviewed studies involving approximately 3,000 specimens of patients with diagnosed colorectal cancer and of healthy control subjects that methylated Septin9 in blood plasma indicates an increased likelihood of colorectal cancer. Epigenomics is sponsoring a multicenter clinical study named PRESEPT in collaboration with Quest Diagnostics (Madison, NJ, USA; www.quest diagnostics.com) and other organizations to evaluate the Septin9 biomarker’s performance for colorectal cancer screening in screening-guideline-eligible individuals who have not been diagnosed with colorectal cancer. Quest Diagnostics is the first commercial laboratory in the USA to offer a laboratory-developed test based on the Septin9 biomarker. Jon R. Cohen, MD, senior vice president and chief medical officer of Quest Diagnostics said, “Early detection rates are dismally low, largely because many patients find existing tests and procedures invasive or unpleasant. Our ColoVantage colorectal cancer test, which is based on Septin9, has yet to be clinically validated as a screening test. Rather, it may promote further evaluation in patients who have resisted testing in the past or as an adjunct to existing procedures.” ColoVantage was validated in multiple studies and achieved an overall 70% sensitivity and 89% specificity. ColoVantage has successfully detected cancer at all stages. Patients who test positive for methylated Septin9 should be further evaluated for the presence of colorectal cancer. A 43 LabMedica International June-July/2013 VISIT US AT: Booth: 4826 LINKXPRESS COM LMI-07-13 143 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Cancer Tissue Handling Needs Freezing Adaption raditional specimen handling methods for diagnosing cancer are hampering the introduction of genetic sequencing technology as a routine laboratory procedure. Tumor tissue obtained through a biopsy is fixed in formalin, and embedded in paraffin for microscopic viewing, but the chemical mixture damages DNA, so sequencing tissue processed in this way can be difficult, if not impossible. Scientists at the Scripps Translational Science Institute (La Jolla, CA, USA; www.scripps.edu) have suggested that a better alternative is to routinely freeze a portion of the specimen, which retains the tissue’s genetic coding while preserving it for future analysis. In order to have enough tissue to freeze, larger or additional biopsy samples may be required, especially when using min- T imally invasive needle biopsy procedures. Although complete genetic evaluations of tumors might require higher sample-storage costs and a more invasive biopsy procedure, most patients would likely agree to that option if it translates into a better diagnosis and possible treatment. Evidence of such benefit should come from randomized clinical trials that compare detailed genetic evaluation of tumor tissue with the current standard of care for cancer patients. Genetically guided cancer therapy is an established procedure for the treatment of malignancies. This is especially true where identifying mutations by genotyping of the human epidermal growth factor receptor 2 gene (HER2) in breast cancer or the proto-oncogene B-Raf gene (BRAF) in melanoma, may alter the chemotherapeutic regime. The level of crucial detail is only possible with whole genome and exome sequencing from frozen tissue. Eric J. Topol, MD, a cardiologist and one of the authors, said, “Deciding how best to obtain tumor samples and how best to process them for whole genome or exome sequencing is a pivotal yet unresolved issue with several layers of complexity. We need to completely rethink the way we have collected and stored cancer tissue samples for decades. It’s becoming increasingly clear that obtaining an accurate map of a tumor’s DNA can be the key to determining the specific mutations that are driving a person’s cancer, how best to treat it and how likely it is to recur.” The article was published on January 2, 2013, in the Journal of the American Medical Association (JAMA). Cell Block Technique Detects Low Frequency Abnormal Cells ifferent cell block techniques have been compared for the detection of low frequency abnormal cells and representative sampling with simple sedimentation. Automated cell block systems rapidly create paraffin-embedded cell blocks by using vacuum filtration to deposit a layer of cells on a filter and infiltrate those cells with reagents and paraffin. Scientists at Hologic Inc (Marlborough, MA, USA; www.hologic.com) compared three cell block systems using a novel tracer-cell model consisting of epidermoid carcinoma (CaSki) cells (American Type Culture Collection; Manassas, VA, USA; www.atcc.org). The cells were prestained in solution with hematoxylin and serially diluted in a background of pooled clinical serous effusion specimens and quantified using a hemocytometer. Ten replicates diluted cells were processed using each cell block method, and the resulting blocks were cut to produce two slides from each block. The slides were deparaffinized, counterstained with eosin, cover-slipped, and screened for the presence of tracer cells. Tracer cells were identified on the initial slides for 20 of 40 simple sedimentation cell blocks, 21 of 40 in Richard-Allan HistoGel cell blocks (Thermo Scientific, Waltham, MA, USA; www.thermoscientific.com), and 25 of 40 Hologic’s Cellient cell blocks. All three methods showed representative sampling in 100% of the blocks made from the 100 tracer/mL specimen. With blocks made from the 10 tracer/mL specimen, simple sedimentation, HistoGel, and Cellient showed 90.0%, 80.0%, and 100% representative sampling, respectively. Representative sampling at the 1 tracer/mL dilution was 10.0% for simple sedimentation and 30% for HistoGel and Cellient. At the 0.1 tracer/mL dilution, only Cellient showed representative sampling. The study was published on January 3, 2013, in the journal Pathology and Laboratory Medicine International. D LINKXPRESS COM LMI-07-13 135 V I S I T LINKXPRESS COM R E A D E R VISIT US AT: S E R V I C E ® P O R T A L Renew / Start your Free Subscription Access Interactive Digital Magazine Instant Online Product Information Booth: 4252 LINKXPRESS COM LMI-07-13 144 LabMedica International June-July/2013 44 LabMedica for daily laboratory medicine news click to www.labmedica.com Abnormal Protein Potential Biomarker for ALS and FTD dentification of abnormal protein may help diagnose and treat Amyotrophic lateral sclerosis (ALS), or Lou Gehrig’s disease and frontotemporal dementia (FTD). Investigators have discovered an abnormal protein that first forms as a result of genetic abnormalities and later builds up in the brains of many patients with either disease. These investigators are beginning to recognize ALS and FTD as part of a spectrum disorder with overlapping symptoms. By analyzing brain tissue from patients with ALS or FTD, Dr. Petrucelli, chair of neuroscience at Mayo Clinic in Florida (Jacksonville, FL, USA; www.mayoclinic.org/jacksonville) and his team discovered that the abnormal protein, which they call C9RANT, is generated as a result of repeat expansions of nucleotides in the noncoding region of the C9ORF72 gene. These expansions are the most common cause of ALS and FTD. “Simply put, an error in the highly regulated cellular process through which proteins are generated causes the abnormal production of C9RANT,” explained Dr. Petrucelli. The scientists discovered the protein I C9RANT after creating a novel antibody to specifically detect it. The ability to detect C9RANT in individuals’ cerebrospinal fluid (CSF) may provide a valuable diagnostic and prognostic tool for identifying patients carrying the C9ORF72 repeat expansion and for then tracking the progression of the disease in these at-risk individuals. Amyotrophic lateral sclerosis (ALS), or Lou Gehrig’s disease, and frontotemporal dementia (FTD) are devastating neurodegenerative diseases with no effective treatment. “Although it remains to be shown whether C9RANT is causing the cell death or toxicity associated with disease symptoms, our discovery offers a potential target to prevent neuronal loss in patients carrying the C9ORF72 repeat expansion,” said Dr. Petrucelli. These studies were reported online in the February 12, 2013 Cell Press journal Neuron. The investigators described an abnormal protein that first forms as a result of genetic abnormalities and later builds up in the brains of many patients with ALS or FTD. Image: Immunohistochemistry of postmortem tissue reveals neuronal inclusions of C9RANT in the brains of patients with c9FTD/ALS (Photo courtesy of Neuron, Ash et al.). Biotherapy Monitoring Kits Expand Theranostic Range ew additions for two biotherapy monitoring kits are now available in all EU countries. Theradiag (Marne-la-Vallée, France; www.theradiag.com) a company specializing in theranostic and in vitro diagnostics, has obtained a CE mark for two new biotherapy monitoring kits; Tocilizumab (anti-IL6R) and Rituximab (anti-CD20) that further expand the Lisa Tracker range. The company now offers a range of seven blood test kits providing comprehensive multiparameter diagnosis solutions to monitor patients with autoimmune and inflammatory diseases. Rituximab is also used to treat hematological cancers. Michel Finance, CEO of Theradiag, said, “These two new monitoring kits expand our theranostic range to cancerology and show that we are on track to meet our roadmap targets. The Lisa Tracker range is a unique diagnostic tool, which enables physicians to tailor treatments and optimize patient care. This new CE mark outlines our expert know-how in our lines of innovative proprietary diagnostic products and their sale in international markets.” Theradiag innovates and develops theranostic tests (combining treatment and diagnosis) that measure the efficiency of biotherapies in the treatment of autoimmune diseases, cancer, and AIDS. Theradiag is thus participating in the development of “customized treatment,” which favors the individualization of treatments, the evaluation of their efficiency, and the prevention of drug resistance. The company markets the Lisa-Tracker range (CE marked), which is a comprehensive multiparameter diagnosis solution for patients with autoimmune diseases treated with biotherapies. Theradiag is also developing new diagnostic markers thanks to its microRNA platform, which will allow specific biomarkers to be identified in order to guide therapy and will be first applied to the treatment of AIDS. N 45 LabMedica International June-July/2013 LINKXPRESS COM LMI-07-13 145 PRODUCT NEWS To receive prompt and free information on products, log on to www.LinkXpress.com or fill out reader service form located on last page ELISA KIT HEMOGLOBIN PHOTOMETER VERIFICATION ASSAYS DIAsource ImmunoAssays EKF Diagnostics Streck Trinity Biotech The 1,25-Dihydroxy-Vitamin D ELISA kit is a complete assay for the extraction of 1,25-Dihydroxy-Vitamin D, followed by quantitation by an enzyme-linked immunoassay. Key features include accurate results, reduced hands-on time, and fast turnaround time. The STAT-Site M Hgb is a batteryoperated, portable analyzer that provides fast results and precise hemoglobin analysis in seconds using a single drop of fingerstick blood. Key features include reduced personnel training, reliability, and low required user maintenance. The Retic-Chex Linearity assays with instrument-specific values for reticulocyte percentages verify the accuracy of hematology instruments. The Retic-Chek Linearity is assayed for the Sysmex XN-series and is available in five-level sets with 3.0 mL plastic cap-pierceable vials. The TrinLab D2 is designed for lower volume EIA, and offers an innovative system, increased security, and easy-to-use intuitive software. The system is available with applications for CAPTA and MarDx infectious disease, as well as autoimmune ELISA reagents. LINKXPRESS COM LMI-07-13 221 LINKXPRESS COM LMI-07-13 222 LINKXPRESS COM LMI-07-13 223 ELISA AUTOMATION SYSTEM LINKXPRESS COM LMI-07-13 224 Molecular Blood Test Diagnoses Herpes Simplex Virus Infection olymerase chain reaction (PCR) is now the test of choice for identifying central nervous system infection caused by herpes simplex virus (HSV). A longitudinal review of HSV PCR testing at two pediatric academic medical centers in the USA determined the clinical features of children positive for serum HSV through PCR testing. Scientists at the University of Texas Southwestern Medical Center (Dallas, TX, USA; www. utsouthwestern.edu) in collaboration with others carried out a retrospective review of all patients who had a serum HSV PCR test at the participating institutions from 2005 to 2010. The study focused on children with one positive blood HSV PCR test and reviewed their charts for demograph- P LINKXPRESS COM ic, clinical, and other data. They defined a neonatal HSV infection as occurring before 42 days of age. More than 700 patients received blood HSV PCR testing during the study period. Of those children, 294 were infants younger than 42 days old. A positive HSV PCR test was found in 45 patients (6.1%), 21 of whom were infants. Of these infants, approximately 25% were diagnosed with skin, eye, and mouth HSV disease; another 25% were diagnosed with central nervous system HSV disease; and approximately 50% had disseminated HSV disease. One third of the neonatal HSV patients in this study died. For two of those infants, the blood HSV PCR was the only positive HSV test. In another four children, the blood HSV PCR was the LMI-07-13 146 first test that was positive. Among the 24 older children with positive blood HSV PCR tests, 50% were immunocompromised. Another 29% suffered from atopic dermatitis. Mucocutaneous lesions were much more common, occurring in 92% of these older children and 13% of the older children died. In four of the older children, the blood HSV PCR was the only positive test, and it was the first positive test in another seven of these children, all of whom had vesicular lesions that would have clinically suggested an HSV diagnosis. The authors concluded that HSV PCR testing on serum samples can be a useful adjunct in the diagnosis of HSV, especially among young infants who are much less likely than older children to have mucocutaneous lesions. The study was published in the August 2012 edition of the Journal of Pediatrics. Serum Albumin Levels Predict Pneumonia Severity he prognostic value of serum albumin levels in hospitalized adults with community-acquired pneumonia has been evaluated. When serum albumin levels are measured within 24 hours of admission to the hospital, they can be correlated with the outcome of patients with community-acquired pneumonia (CAP). Scientists at the University Hospital of Bellvitge (Barcelona, Spain; www.bellvitgehospital.cat) carried out a prospective cohort of adults with CAP requiring hospitalization from 1995 through 2011. Serum albumin results were obtained from the central laboratory database and were determined by a molecular absorption spectrometry utilizing bromocresol green. Pathogens in blood, normally sterile fluids, sputum, and other samples were investigated using standard microbiological procedures. Serum albumin levels were measured within 24 hours of admission. The primary end point was 30-day mortality. T During the study period, 3,463 patients with CAP required hospitalization. The median value of albumin was 31 g/L. As levels of serum albumin decrease, the risk of complications significantly increased. Decreased albumin levels were also significantly associated with prolonged time to reach clinical stability, prolonged hospital stay, intensive care unit (ICU) admission, the need for mechanical ventilation, and 30day mortality. Hypoalbuminemia was documented in 1,307 (37.7%) patients, whose serum albumin was less than 30 g/L. The authors concluded that hypoalbuminemia is frequent among hospitalized patients with CAP. Low serum albumin levels within 24 hours of hospital admission are significantly associated with increased risk of complications and poor outcome from CAP. Serum albumin is an objective and good prognostic marker in hospitalized adults with CAP. The study was published on December 31, 2012, in the Journal of Infection. LabMedica International June-July/2013 46 LabMedica for daily laboratory medicine news click to www.labmedica.com Genetic Test Identifies Small but Deadly Lung Cancers novel genetic test can help identify small but aggressive lung tumors associated with poor survival. The test can identify highly aggressive lung cancer at a very early stage and the results may help physicians decide on which chemotherapy treatment is suitable for patients with aggressive tumors. Scientists at the University of California, San Francisco (UCSF; CA, USA; www.ucsf.edu) working with colleagues from California and China, conducted an international validation study of the newly available genetic test in small tumors likely to be detected by the new lung cancer computed tomography (CT) screening A Increasing Antigen Levels Predicts Aggressive Prostate Cancer guidelines. They studied 269 patients who underwent lung surgery to remove aggressive, non-small-cell lung tumors that were smaller than 2 cm in size. Aggressive tumors usually form, grow, and spread quickly, but theses tumors had not yet spread to the lymph nodes. The investigators found overall postsurgical survival rates of 83%, 69%, and 52% in low-, intermediate-, and high-risk groups, respectively. Similar results were found in analyzing tumors sized 1 cm or smaller. Early detection of lung tumors through low-dose computed tomography (CT) screening, combined with a reliable test that can identify highly aggressive tumors that benefit from individualized treatments, will help decrease the mortality rate from lung cancer, the leading cancer killer of men and women in the USA, according to the American Cancer Society (Atlanta, GA, USA; www.cancer.org). Johannes Kratz, MD, from the UCSF said, ongitudinal measures of prostate specific antigen (PSA) improve the accuracy of aggressive prostate cancer detection when compared with a single measurement of PSA alone. As a rule, the higher the PSA level in the blood, the more likely a prostate problem is present, but many factors, such as age, race, and noncancerous conditions can affect PSA levels. Scientists from Kaiser Permanente (Pasadena, CA, USA; www.kaiserpermanente.org) collaborating with others, retrospectively examined the electronic health records of 219,388 men ages 45 and older who had at least one PSA measurement, while some had at least three PSA measurements. This cohort was followed from January 1, 1998, to December 31, 2007, for the development of biopsy-confirmed prostate cancer. The annual percent changes in total serum PSA levels were estimated using linear mixed models. The accuracy of prostate cancer prediction was assessed for prostate cancer overall and for aggressive disease with a Gleason score equal to or greater than seven, and was compared with that of a single measure of PSA level using area under the receiver-operating characteristic curves. The study found that annual percent changes in PSA more accurately predicted the presence of aggressive prostate cancer when compared to single measurements of PSA alone, but only marginally improved the prediction of prostate cancer overall. The men in the cohort showed a mean change of 2.9% in PSA levels per year and the rate of change in PSA increased modestly with age. Lauren P. Wallner, PhD, MPH, the study lead author, said, “The results of this study could provide clinicians with a better prostate cancer preventive strategy that could help differentiate between men with an aggressive form of the disease and those who have slow growing, indolent cancer that may not necessarily merit treatment. Our study demonstrates that repeated measurements of PSA over time could provide a more accurate, and much needed detection strategy for aggressive forms of prostate cancer.” The study was published on January 15, 2013, in the British Journal of Urology International. “We have known for a number of years that patients with aggressive early stage lung cancers identified by molecular prognostic tests benefit from additional therapy. Imagine receiving the news from your doctor that despite undergoing surgery for your tiny one-centimeter lung cancer, you still have a 25% chance of dying in the next five years. Now, instead of telling these patients we have nothing more for them, we can offer this test which reliably identifies whether they have highly aggressive tumors.” He added, “This new genetic test is immediately available to clinicians via a CLIA-approved testing laboratory, and it’s a tool that patients can ask their physicians about today, not sometime in the future.” The study was presented at the 49th Annual Meeting of The Society of Thoracic Surgeons held 26-30 January, 2013 in Los Angeles (CA, USA; www.sts.org). L VISIT US AT: Booth: 4226 47 LabMedica International June-July/2013 LINKXPRESS COM LMI-07-13 147 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Gene Found for Common Form of Epilepsy gene mutation linked to the most common form of epilepsy has been found that could in the future lead to a genetic test for the condition. The use of exome sequencing detected the gene for autosomal dominant familial focal epilepsy with variable foci (FFEVF), which is notable because family members have seizures originating from different cortical regions. A team of scientists working with those at University of South Australia (Adelaide, SA, Australia; www.unisa.edu.au) studied about 90 families where two members had epilepsy. The exomes of individuals were independently sequenced both in Australia and in The Netherlands. The coding sequences were enriched using the SureSelect Human All Exon 50Mb kit (Agilent Technologies; Santa Clara, CA, USA; www.agilent.com). After sequence A capture and amplification, fragments were sequenced using a SOLiD v4 instrument (Applied Biosystems; Mulgrave, VIC, Australia; www. appliedbiosystems.com.au). The results showed that a gene called DEP domain-containing 5 (DEPDC5) causes focal epilepsy in about 12% of families in which only two people have focal epilepsy. This high frequency establishes DEPDC5 mutations as a common cause of familial focal epilepsies. As well as opening new opportunities for diagnosing epilepsy, the scientists believe their discovery will also lead to better-targeted treatments. The identification of DEPDC5 as the gene underlying FFEVF substantially advances understanding of the pathogenesis of epilepsy by implicating another new gene pathway. Apart from enabling the diagnosis of FFEVF through molecular testing, these find- ings also enable strategies to be devised to improve prognosis through tailored treatment targeting DEPDC5. Ingrid E. Scheffer, MD, professor and pediatric neurologist, of the Florey Neuroscience Institute (Melbourne, VIC, Australia; www.florey. edu.au) said, “This discovery is paradigm shifting, if you have focal epilepsy and there is no cause known, then this gene should be tested to look for a mutation.” The study was published on March 31, 2013, in the journal Nature Genetics. Image: The SureSelect Human AllExon V5 and V5 + UTRs are designed for next-generation sequencing and produce exome samples ready for sequencing the next day (Photo courtesy of Agilent Technologies). Project Focuses on Discovery of Early Cancer in Women cientists are focusing on the early detection of breast and ovarian cancer with the goal of developing a test to identify tumor markers present in blood and link these markers to the presence of cancer. Partners in the project called EpiFemCare, include GATC Biotech (Constance Germany, www. gatc-biotech.com), which will manage sample processing, i.e., the DNA isolation from serum and the reduced representation bisulfite sequencing from serum derived DNA. This method analyses DNA methylation in normal and tumor DNA. In addition, 6 institutions from 5 European countries combining clinical, scientific, and industrial expertise will add a new dimension to the treatment of cancer in women. The USD 7.8 million project S from the European Commission will develop and test new methods for screening, diagnosing, and personalizing treatment of breast and ovarian cancer. “We are proud of being a partner within the development of a DNA-based blood test that promotes new ways of diagnosing and treating patients with breast or ovarian cancer. The processing of samples in our ISO 17025 certified Genome & Diagnostic Center is one of our key competences,” commented Peter Pohl, CEO of GATC Biotech AG. The collaborative project is led by Prof. Martin Widschwendter from the Department of Women’s Cancer at the University College London (United Kingdom; www.instituteforwomenshealth.ucl.ac.uk). Collaborators include Charles University (Prague, Czech Republic), Ludwig Maximilians University (Munich, Germany), and companies with expertise in epigenetics and next generation screening (GATC Biotech, Germany), managing, and analyzing the large volumes of data created by these experiments (Genedata; Switzerland). Implementation of successful screening programs has dramatically reduced the number of women dying from cervical cancer. Similarly, the EpiFemCare project aims to reduce the number of women who receive a diagnosis of breast or ovarian cancer when that cancer is already advanced by 50%, also reduce the number of women who receive unnecessary longterm chemotherapy by 50%, and reduce the number of women dying from these female cancers by 20%. VISIT US AT: Booth: 2521 LINKXPRESS COM LMI-07-13 148 LINKXPRESS COM LMI-07-13 138 LabMedica for daily laboratory medicine news click to www.labmedica.com Blood-Based Biomarkers Diagnose Parkinson’s Disease bjective and measurable biomarkers to improve Parkinson’s Disease (PD) diagnostics would be advantageous during its earlier stage, prior to the motor onset phase. Blood-based circulating micro ribonucleic acid (miRNA) biomarkers for PD are quantifiable, as it is known that miRNAs detected in various cells and tissues can also be found in biofluids such as blood plasma and serum. Scientists at the Van Andel Institute (Grand Rapids, MI, USA; www.vai.org) obtained the global miRNA expressions in plasma from an initial discovery set of 32 PD patients and 32 normal controls. They identified nine pairs of PD-predictive classifiers and 13 most differentially expressed miRNAs as potential biomarkers to discriminate PD patients from normal controls. The team used a quantitative real-time polymerase chain reaction technique (qRT-PCR) to O validate and evaluate the performance of these biomarkers. The study subjects were all recruited between January 2006 and November 2009. Total RNA that included miRNAs was isolated from plasma using the TRI reagent RT-blood protocol (Molecular Research Center, Cincinnati, OH, USA; www.mrcgene.com). RNA samples were processed, labeled, and hybridized onto microarrays. The investigators identified nine pairs of PDpredictive classifiers and 13 most-differentially expressed miRNAs as potential biomarkers to discriminate PD patients from normal controls. The combination of biomarkers that achieved the highest predictive performance was applied to another set of 42 PD patients and 30 controls from the same clinical site. A new, independent validation set of samples from 30 PD patients from a different clinical site showed lower bio- marker performance. Sok Kean Khoo, PhD, the senior author said, “The ideal biomarker should be minimally invasive, cost efficient, quantifiable, reproducible, specific, and sensitive. Biofluids such as plasma could provide an ideal resource for development of such desirable biomarkers. This is a proof-of-concept study to demonstrate the feasibility of using plasma-based circulating miRNAs. The hypothesis that miRNA expression changes are associated with the neurodegenerative disease process, either directly or as part of positive feedback loops, is emerging rapidly. This study opens new opportunities to the exploration of circulating miRNAs for diagnostic, prognostic, and therapeutic interventions for PD and possibly other neurodegenerative diseases.” The study was published in the December 2012 issue of the Journal of Parkinson’s Disease. Blood Calcium Levels Linked to Ovarian Cancer igh blood calcium levels might predict ovarian cancer, the most fatal of the gynecological cancers. Many ovarian cancers express parathyroid hormone-related protein, which acts to raise calcium levels in serum, which may be a biomarker for ovarian cancer. Cancer epidemiologists at Wake Forest Baptist Medical Center (Winston-Salem, NC, USA; www.wake health.edu) measured total and ionized serum calcium levels using ionspecific electrodes. They were pHadjusted because the protein binding of calcium is affected by pH; ionized calcium in blood is commonly corrected to standard pH. Serum samples were collected as part of Third National Health and Nutrition Examination Surveys (NHANES III) between 1988 and 1994 from two nationally representative prospective cohorts. Eleven ovarian cancer deaths were observed over 95,556 personyears of follow-up through December 31, 2006, representing 137,404 ovarian cancer deaths in the United States of America. The range in total serum calcium in cases was 2.14– 2.44 mmol/L and for ionized serum calcium was 1.17–1.31 mmol/L. The normal reference range for total serum calcium is approximately 2.17–2.52 mmol/L and 1.12– 1.32 mmol/L for ionized serum calcium. In the second cohort, there were eight ovarian cancer cases in over 31,089 person-years of followup. The range of total serum calcium was 1.98–2.93 mmol/L. The rela- H 49 LabMedica International June-July/2013 tive hazard for fatal ovarian cancer was 1.52 per 0.1 mmol/L increase in total serum calcium and 2.44 per 0.1 mmol/L increase in ionized serum calcium. Gary G. Schwartz, PhD, the lead author of the study, said “One approach to cancer biomarker discovery is to identify a factor that is differentially expressed in individuals with and without cancer and to examine that factor’s ability to detect cancer in an independent sample of individuals.” His coauthor added, “Everyone’s got calcium and the body regulates it very tightly. We know that some rare forms of ovarian cancer are associated with very high calcium, so it’s worth considering whether more common ovarian cancers are associated with moderately high calcium.” The authors concluded that this biomarker, the higher levels of calcium in serum, were significantly positively associated with the risk of ovarian cancer in two prospective cohorts. The principal limitation of this study is the small number of cases. Conversely, the study has several strengths: it is prospective, uses population-based data from two nationally representative cohorts, and is the first to study ionized serum calcium. The existence of stored sera from sample sets of women with and without ovarian cancer should facilitate the confirmation or refutation of the association between serum calcium and ovarian cancer. The study was published January 9, 2013, in the journal Gynecologic Oncology. LINKXPRESS COM LMI-07-13 149 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Mast Cell Biomarker Predicts Severity of Dengue protein produced by mast cells in the immune system may predict which people infected with dengue virus will develop lifethreatening complications. Dengue virus (DENV) spread by mosquitoes, infects as many as 390 million people worldwide each year, and is a significant health issue in tropical areas of the world including parts of Latin America and Asia, and health professionals in Florida have reported cases in recent years. Scientists at Duke University (Durham, NC, USA; www.duke.edu) working with their colleagues at Duke-National University of Singapore (www.duke-nus.edu.sg) investigated the role of mast cells in attacking dengue virus in humans, and identified a biomarker derived from the mast A cells, that appeared to predict the most severe cases of the disease in human patients. Samples used for the investigation were derived from patients who ranged in age from 18 to 77 years, with a mean of 40 years; 42% of samples were obtained from females, and 58% from males. Dengue positive samples were determined based on physician diagnosis as well as molecular tests including reverse transcriptase polymerase chain reaction (RT-PCR) for viral ribonucleic acid (RNA). The dengue fever (DF) and dengue hemorrhagic fever (DHF) patient sera used in this study were previously determined to be positive for serotypes 1, 2, or 3 by RT-PCR using the OneStep RT-PCR Kit (Qiagen; Valencia, CA, USA; www.qiagen.com). Enzyme-linked immunosorbent assay (ELISA) kits for the human mast cell biomarker chymase, a serine protease, were obtained from Antibodies-Online (Atlanta, GA, USA; www.antibodies-online.com). Patients that were diagnosed with DF or DHF showed chymase levels in serum obtained during the acute phase of infection were significantly higher than levels in the serum of either healthy controls or individuals with fever that were DENV negative by RT-PCR. DF patients displayed an increase in serum chymase that was approximately 10 times higher than in healthy individuals or DENV-negative patients while, in DHF patients, chymase levels 30 times higher than healthy controls were detected. The study was published on April 30, 2013, in the journal eLife. Antinuclear Antibodies Detected by Automated Immunofluorescence ntinuclear and anticytoplasmic antibodies are important diagnostic markers for systemic rheumatic diseases and autoimmune hepatitis. The diagnostic performance of automated systems for image acquisition and interpretation of indirect immunofluorescence-based tests for antinuclear antibodies are increasingly being used. Scientists at the Catholic University Leuven (Leuven, Belgium; www.kuleuven.be) measured by automated indirect immunofluorescence 268 consecutive samples submitted to the laboratory for antinuclear antibody testing. Included in the study were in 231 patients with a systemic rheumatic disease at the time of diagnosis, 143 blood donors, 134 patients with chronic fatigue syndrome, and A 133 diseases controls whose diagnosis of systemic rheumatic disease was excluded. Antinuclear antibodies were detected by Zenit G-Sight (A. Menarini Diagnostics, Florence, Italy; www.menarinidiagnostics.it), an automated system for image acquisition and interpretation of indirect immunofluorescence-based tests. The automated fluorescence microscope uses a light-emitting diode (LED) light source with a 450–490 nm bandwidth and is equipped with a motorized precision stage for up to five slides and a Charged Coupled Device (CCD) color camera. Image acquisition by G-Sight was of high quality and the accuracy of pattern assignment was limited. There was a significant correlation between LINKXPRESS COM LMI-07-13 150 automated estimation of fluorescence intensity, known as the probability index of positivity and end-point titer. Probability index interval specific likelihood ratios for systemic rheumatic disease increased with increasing level of positivity probability. Probability indexes were higher with the transfected mitotic human epithelioid (Hep-2000) cell substrate (Immunoconcepts; Sacramento, CA, USA; www.immunoconcepts.com) than with the human epithelial cell (Hep-2) substrate. The probability indexes reached a plateau at titer 160 with the Hep-2000 substrate. The study was published on January 16, 2013, in the journal Clinica Chimica Acta. LabMedica International June-July/2013 50 LabMedica for daily laboratory medicine news click to www.labmedica.com Flow Cytometry Evaluated for Cord Blood Differentials he potential of flow cytometry to analyze and to report leukocyte differentials on cord blood to be used for hematopoietic stem cells has been evaluated. Currently, the reference method for white blood cell (WBC) is the microscopic manual count, but international standards advise that potential donor blood is tested for total nucleated cell count, nucleated red blood cell count (nRBCs), total number of CD34 cells, viability or potency as measured by viable CD34 cells. Colony-forming unit assays, microbial cultures, and finally a complete blood count with WBC differential are also advisable. Hematologists at the Centre Hospitalier Universitaire (CHU; Rennes, France; www. chu-rennes.fr) analyzed 161 cord bloods between November 2010 and February 2011. WBC differentials were determined for each sample, by a cell counter, a manual method, and the flow cytome- T try using an antibody cocktail. WBC differential includes the count of neutrophils, eosinophils, basophils, lymphocytes, monocytes, immature granulocytes, and blasts cells. All samples were analyzed on the HematoFlow platform (Beckman Coulter, Miami, FL, USA; www.beckmancoulter.com) within 12 hours of collection. This platform is built around Beckman Coulter’s FP1000 cell preparator, along with their FC500 five-color flow cytometer. The antibody cocktail used was another Beckman Coulter product called the CytoDiff. A good correlation was obtained for neutrophils, lymphocytes, and immature granulocytes when the manual method was compared to the flow cytometry, but was weaker for eosinophils and even lower for monocytes and basophils. The flow cytometry method employed allowed the identification of 12 cell subtypes (neutrophils, eosinophils, basophils, B lymphocytes, T-non-cyto- toxic and T cytotoxic/Natural Killer (NK) lymphocytes, CD16 negative monocytes and CD16 positive monocytes, immature granulocytes, B blasts, T blasts and non-B-non-T blasts) within a single panel of antibodies and a minimal volume of 50 μL of blood. The authors concluded that the flow differential has some drawbacks such as the cost of CytoDiff reagent, but this can be balanced by the reduction in technician time required for manual counting and the use of a standardized product. The flow cytometry appears as a technique completely adapted to provide a WBC differential on a cord blood sample. The additional cell subset counts offered in the same turn-around-time would probably be exploited in the near future to better characterize the engraftment potential. The study was published in the February 2013 issue of the International Journal of Laboratory Hematology. Leukocyte Ratio Predicts Ulcerative Colitis Severity lood neutrophil-to-lymphocyte (N/L) ratio is an indicator of the overall inflammatory status of the body, and an alteration in N/L ratio may be found in ulcerative colitis (UC) patients. An optimal test has not yet been developed for UC and therefore the adjunctive use of additional blood markers may add a significant advantage for predicting disease severity and achieving diagnostic precision. Medical scientists at Erciyes University (Kayseri, Turkey; www.erciyes.edu.tr) enrolled 26 UC patients, 18 males and 8 females, and 28 healthy controls, 10 males and 18 females in the study. Complete blood counts, erythrocyte sedimentation rates (ESR), and C-reactive protein levels (CRP) were established for both patients and controls. The white blood count (WBC), neutrophil, and lymphocyte counts were recorded, and the N/L ratios were calculated from these parameters. The median disease duration in UC patients was 2.75 years. The N/L ratios of patients with active UC were significantly higher at 3.85 ± 2.71 than those of inactive UC at 2.40 ± 1.05 and controls at 1.77 ± 0.68 were. The optimum N/L ratio cut-off point for active UC was 2.47. There was no significant difference between inflammation parameters, disease extension, and disease activity. The other inflammation markers such as ESR and CRP were also higher in the patients with active UC. The authors concluded that in patients with UC, the N/L ratio is strongly associated with active disease. Unlike many other noninvasive markers of UC, the N/L ratio is inexpensive and readily available. Although the accuracy of the N/L ratio for detecting active UC is suboptimal, the ratio is an easily derived measure that might, in combination with other markers, assist in identifying patients at increased risk of active and severe disease. The study was published in the January 2013 issue of the Journal of Clinical Laboratory Analysis. B 51 LabMedica International June-July/2013 VISIT US AT: Booth: 3026 LINKXPRESS COM LMI-07-13 151 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Molecular Immunoassay Diagnoses Melioidosis elioidosis is caused by the Gram-negative bacterium Burkholderia pseudomallei for which the standard test growing it on microbiological culture media, which requires at least 3 to 4 days to obtain a result, hindering successful treatment of acute disease. Where the seroprevalence of antibodies to B. pseudomallei is relatively low, serology is a potentially advantageous addition to culture in the diagnosis of melioidosis and serology would be very effective in diagnosing travelers and military personnel returning from endemic tropical areas. Scientists at James Cook University (Douglas, Australia; www. M jcu.edu.au) developed an enzymelinked immunosorbent assay (ELISA) and a quantitative immunopolymerase chain reaction (PCR) assay capable of detecting melioidosis-specific antibodies. They demonstrated their validity with indirect haemagglutination assay (IHA)-negative sera from patients with melioidosis. A total of 10 serum samples from three IHA-positive and three IHA-negative melioidosis patients were tested along with sera from six healthy controls. To verify the assays, the scientists used various techniques including immunoblotting, indirect peroxidase-conjugated protein G ELISA, and indirect terminus utilization VISIT US AT: substance (Tus) DNA replication terminator sites (Ter)-lock immunoPCR. Both the latter systems Both systems were based on the detection of immunoglobulin G (IgG) by protein G conjugated to a signal generation system consisting of either the enzymatic activity of peroxidase or a quantitative PCR (qIPCR) readout in the case of Tus and the TTlock-T DNA probe. All patient sera, including that collected at presentation and in subsequent follow-up collections, reacted against the B. pseudomallei antigenic fraction in both the G-peroxidase ELISA and TT-lock qIPCR format. Individual negative control sera from six healthy controls did not react against the B. pseudomallei antigenic fraction in either assay. The authors concluded that although the indirect TT-lock qIPCR system is slightly slower than the ELISA format, it requires the least amount of serum and would be advantageous when multiple testing is required for the confirmation of disease. The ability to detect antibodies in patient sera that were persistently IHA negative is very promising, indicating that both immunoassay formats will be ideal for the rapid and reliable diagnosis of melioidosis in patients in nonendemic regions. The study was published in the February 2013 edition of the journal Diagnostic Microbiology and Infectious Disease. Image: Burkholderia pseudomallei, the causative agent of melioidosis (Photo courtesy of Dennis Kunkel Microscopy). Antibodies to Carbamylated Proteins Provide Insight into Rheumatoid Arthritis Booth: 2034 etection of antibodies to carbamylated proteins (anti-CarP) is an important advance in the diagnosis of Rheumatoid Arthritis (RA). A study published in 2012 by a team at Leiden University Medical Center (LUMC; Leiden, The Netherlands; www.lumc.nl) in Proceedings of the National Academy of Sciences of the United States of America (PNAS) showed that Immunoglobulin G (IgG) and IgA antibodies recognizing carbamylated antigens were present in about 50% of RA patients. Anti-CarP antibodies recognize homocitrulline and are therefore distinct from anticitrullinated protein antibodies (ACPA), including anti-cyclic citrullinated peptide (anti-CCP), a biomarker commonly used to diagnose RA. Anti-CarP IgG and IgA were detected in 16% and 30% of ACPA negative RA patients respectively. Additionally, anti-CarP antibodies were shown to be predictive of a more severe course of disease as measured by radiological progression in ACPA negative RA patients. LUMC and Inova (San Diego, CA, USA; www.inovadx.com) have announced the completion of an D LINKXPRESS COM LMI-07-13 152 exclusive, worldwide license agreement for technology developed at LUMC to detect antibodies to carbamylated proteins (anti-CarP). “The detection of autoantibodies in sera of RA patients has provided important insight into the processes that initiate and drive RA. Since anti-CarP antibodies can also be detected in a subgroup of patients for whom so far no serological markers were available we believe this may provide new insight into the pathogenesis of RA,”said Dr. Leendert Trouw, assistant professor at LUMC. Prof. Tom Huizinga, head of the department of Rheumatology at LUMC added “With new treatment options at hand it is now possible to apply early and aggressive treatment. Understanding which patients would benefit most from such an intervention is important to maximize efficiency, and detection of anti-CarP antibodies may identify such patients.” The LUMC is part of the Dutch Federation of University Medical Centers (NFU). The NFU is a collaboration of the eight University Medical Centers of the Netherlands. LabMedica International June-July/2013 52 LabMedica for daily laboratory medicine news click to www.labmedica.com Hepatitis C Immunoassays Evaluated apid anti-hepatitis C (HCV) immunoassays can assist and identify chronically infected patients who are unaware of their status. The performance characteristics of three premarket anti-HCV immunoassays have been evaluated and compared for their sensitivity and specificity. Scientists at the US Centers of Disease Control (CDC; Atlanta, GA, USA; www.cdc.gov) examined six different studies that used lateral flow immuno-chromatographic assay devices for testing serum, finger stick blood, and oral fluid from three manufacturers. Active HCV infection was determined by quantitative nucleic acid testing (NAT) which detects the presence of HCV ribonucleic acid (RNA). The three immunoassays used in the studies were from Chembio (Medford, NY, USA; www. chembio.com); MedMira (Halifax, R NS, Canada; www.medmira.com); and OraSure (Bethlehem, PA, USA; www.orasure.com). Overall sensitivity and specificity was highest when serum specimens were compared to finger stick and oral fluid samples. The sensitivity of the OraSure test was higher that of the Chembio or MedMira assays. False negative and false positive results occurred with all assays and specimens. OraSure had the least number of false negative at 0% to 6%, while the MedMira assay yielded the largest proportion of false negatives. In two studies, false negatives were associated with human immunodeficiency viral infections. In one study, the OraSure assay outperformed the conventional enzyme immunoassay (EIA). The authors concluded that antiHCV tests detect both current and past infection, but cannot differentiate between them. Patients who are positive with a rapid anti-HCV test should also be tested with NAT, which is more expensive and labor intensive. The authors note that a quantitative antigen assay Architect HCV Ag (Abbott, Abbott Park, IL, USA; www.abbott.com), which is performed on an automated platform is available in Europe. This assay is also less expensive and does not require the intensive labor of the NAT, but is less sensitive. The study was published on December 7, 2012, in the journal Antiviral Therapy. Image: The OraQuick test for detection of the Hepatitis C virus (HCV) (Photo courtesy of OraSure Technologies). Microbiological Molecular Assay Analyses Heart Valve Tissue ositive heart valve (HV) culture is a major criterion for the diagnosis of infective endocarditis, but is poorly sensitive compared with molecular assays. Molecular methods applied directly to HV tissue have shown promise in negative-culture infective endocarditis and sequencing of the gene encoding 16S ribosomal ribonucleic acid (rRNA) is an accurate means of identifying microorganisms and, offers sensitive and rapid diagnosis. Scientists at the Central University Hospital at Limoges (CHU; France; www.chu-limoges.fr) applied a twostep broad-range polymerase chain reaction (PCR) and a specific realtime PCR to HV samples and compared the results with those of serologic tests and conventional microbiological methods. This study examined HV samples excised from 31 patients with definite endocarditis based on Duke’s modified criteria, between January 1, 2002, and December 31, 2007. The aortic valve was affected in 15 cases and the mitral valve in 16 cases. Two broad-range PCR methods were applied to the 31 HV samples. The first was a real-time (RT-PCR) method, followed by a conventional end-point PCR that was applied to HV samples on which the first PCR was negative. Five specific RT-PCR P 53 LabMedica International June-July/2013 procedures were also used in order to identify Bartonella spp., Tropheryma whipplei, Chlamydophila pneumoniae, Mycoplasma pneumonia, and Coxiella burnetii. Blood cultures were positive in 23 cases. The RT-PCR was positive in 11 of the 23 patients with blood culturepositive endocarditis. All the sequencing results matched the blood culture results to the genus level at least. Seven culture-negative HV specimens gave an amplification product, sequencing of which identified Streptococcus mutans in one patient and Streptococcus anginosus in another patient. Streptococcus gallolyticus was found three patients and Staphylococcus epidermidis in two patients. Specific PCR identified one T. whipplei, which was also identified by conventional end-point PCR. The authors concluded that the strategy of combining the two-step broad-range PCR methods improved the sensitivity of the molecular method from 38.7% to 58%. Their results confirm that blood culture is still the gold standard for the diagnosis of infective endocarditis, but does show that molecular methods applied to HV can be useful when blood culture is negative. The study was published January 12, 2013, in the journal Diagnostic Microbiology and Infectious Disease. VISIT US AT: Booth: 2034 LINKXPRESS COM LMI-07-13 153 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Saliva Gland Test Proposed for Parkinson’s Diagnosis bnormal proteins associated with Parkinson’s are consistently found in the submandibular salivary glands, under the lower jaw. Therefore, testing a portion of a person’s saliva gland may be a way to diagnose Parkinson’s disease. Scientists from the Mayo Clinic Arizona (Phoenix, AZ, USA; www.mayoclinic.org/arizona) performed a study of 15 people with an average age of 68 who had Parkinson’s disease for an average of 12 years, responded to Parkinson’s medication, and did not have known salivary gland disorders. Biopsies were taken of two different salivary glands: the gland under the lower jaw and the minor salivary glands in the lower lip. The biopsied tissues were stained and reviewed for evidence of the abnormal Parkinson’s protein. In four of the initial lower jaw biopsies, while A researchers were still perfecting the technique, not enough tissue was available to complete the tests. The abnormal Parkinson’s protein was detected in nine of the 11, or 82%, of the patients with enough tissue to study. “While still under analysis, the rate of positive findings in the biopsies of the lower lip glands appears to be much lower than for the lower jaw gland. This study provides the first direct evidence for the use of lower jaw gland biopsies as a diagnostic test for living patients with Parkinson’s disease,” said study author Charles Adler, MD, PhD, with the Mayo Clinic Arizona and a Fellow of the American Academy of Neurology. “This finding may be of great use when needing tissue proof of Parkinson’s disease, especially when considering performing invasive procedures such as deep brain stimulation surgery or gene therapy.” The investigators intend to present the study at the American Academy of Neurology’s 65th annual meeting in San Diego (CA, USA), March 16-23, 2013. Image: Anatomical illustration of human salivary glands (Photo courtesy of PR Science). Genetic Markers Associated with Early Cancer-Specific Mortality n analysis has found that the loss or amplification of particular DNA regions contributes to the development of prostate cancer. Novel effectors and markers of localized but potentially life-threatening prostate cancer (PCa) have been identified by evaluating chromosomal copy number alterations (CNAs) in tumors from patients who underwent prostatectomy. A team of scientists at Wake Forest School of Medicine (Winston-Salem, NC, USA; www.wakehealth.edu) used a method that can detect these genetic changes in cells from prostate tumors from 125 patients who underwent radical prostatectomy between 1988 and 2004. A second cohort included 103 prostatectomy patients who were treated between 2002 and 2008 with a median follow-up of approximately five years most of whom had a less aggressive form of PCa. CNAs in tumor DNA samples from 125 patients in the discovery cohort who underwent prostatectomy were assayed with high-resolution Affymetrix 6.0 A single-nucleotide polymorphism microarrays (Santa Clara, CA, USA; www.affymetrix.com) and then were analyzed using the Genomic Identification of Significant Targets in Cancer (GISTIC) algorithm. The investigators found that changes in 20 gene regions were likely to contribute to prostate cancer development and changes in seven of the 20 regions were linked with early death from prostate cancer. Patients whose cancer cells had a loss of the gene that encodes for phosphatase and tensin homolog protein (PTEN) and an amplification of the gene that encodes for myelocytomatosis viral oncogene homolog (MYC) were more than 50 times as likely to die from prostate cancer than other patients who had similarly staged tumors and prostate-specific antigen levels at the time of diagnosis. Analyses of 333 tumors from additional patients confirmed the link between PTEN and MYC and prostate cancer lethality. The study was published on April 22, 2013, in the journal Cancer. VISIT US AT: Booth: 3050 LINKXPRESS COM LMI-07-13 154 Diagnostic Test Rapidly Detects Candida nano-inspired platform has been developed that detects DNA from five of the most common Candida species found in patient blood. The diagnostic platform based on T2 magnetic resonance, which is capable of sensitive and rapid detection of fungal targets in whole blood in approximately three hours, or up to 25 times faster than the current gold standard of blood culture. A scientific team led by those from Brown University (Providence, RI, USA; www.brown.edu) studied the use of a novel diagnostic method based on T2 magnetic resonance (T2MR) to diagnose candidemia. The T2Candida assay uses blood-compatible polymerase chain reaction (PCR) to amplify Candida DNA, which then binds to superparamagnetic nanoparticles coated with a complementary DNA strand. The binding event causes the nanoparticles to cluster, which changes the sample’s T2MR signal. The investigators tested both Candida-spiked and patient samples and were able to rapidly, accurately, and reproducibly detect five Candida species within human whole blood with a limit of detection as low as one colony forming units (CFU)/mL and a time-to-result of approximately three hours. Spiked samples showed 98% positive agreement and 100% negative agreement between T2MR and blood culture. Clinical samples demonstrated similar concordance with blood culture with the important distinction that T2MR was able to identify Candida species in the presence of antifungals, whereas blood culture could not. The T2MR diagnostic platform is a product of T2Biosystems (Lexington, MA, USA; www. t2biosystems.com) and using this system the scientists were able to detect down to three CFU/mL of C. albicans and C. tropicalis and even lower limits of detection for C. krusei, C. glabrata, and C. parapsilosis. From 24 patients’ whole-blood samples, they were able to correctly identify the 8 candidemic patients, without any false-positive readouts from blood samples that contained bacteria. The study was published on April 24, 2013, in the journal Science Translational Medicine. A LabMedica International June-July/2013 54 LabMedica for daily laboratory medicine news click to www.labmedica.com Plants Provide Diagnostic Reagent for West Nile Virus method has been developed for testing for West Nile Virus (WNV), using plants to produce biological reagents for detection and diagnosis. A plant expression system has been investigated for protein production due to its low-cost and high-scalability nature and its ability to make appropriate posttranslational modifications. Scientists at Arizona State University (Tempe, AZ, USA; www.asu.edu) explored the feasibility of using plant transient expression systems to produce two groups of protein reagents that are required for the detection and diagnosis of WNV infection. One was a recombinant antigen derived from the domain III (DIII) of WNV envelope (E) protein and the second, a monoclonal antibody (mAb E16) that specifically recognizes WNV DIII. High expression levels of both reagents were A observed in two kinds of plants: Nicotiana benthamiana, which is a close relative of tobacco, and lettuce. The two reagents may be readily purified to greater than 95% and retain their native functionality and specificity. The binding specificity of plant-derived E16 at various concentrations of this mAb were incubated with either DIII of WNV or DIII of Dengue virus serotype 2 (DENV-2) that was immobilized on an enzyme linked immunosorbent assay (ELISA) plate. A mammalian cell-culture-derived E16 and a generic human immunoglobulin G (IgG) (Southern Biotech, Birmingham, AL, USA; www.southernbiotech.com) were used as the positive and negative control, respectively. The binding to WNV DIII increased with the concentration of lettuce or N. benthamianaderived E16 in the reaction in a similar manner as the mammalian cell-derived E16 positive control. In contrast, none of the E16s showed specific binding to DIII of DENV-2. The negative control, a generic human IgG, showed no specific binding to either WNV or DENV-2 DIII. These results indicate that the specific avidity for WNV DIII is retained by the plant-derived E16s. This high specificity makes it a valuable reagent in obtaining unambiguous diagnostic results for detecting WNV and WNV infection. Qiang Chen, PhD, the senior author said, “Our test will improve the accuracy of diagnosis, leading to the proper treatment of patients affected by WNV. The plant-derived monoclonal antibody we examined is not only low-cost, but highly specific for WNV antigen and does not recognize antigens from other flaviviruses.” The study was published in the October 2012 issue of the Journal of Biomedicine and Biotechnology. Genetic Mutations Identified for Cowden Syndrome wo new genes have been identified that are associated with Cowden syndrome (CS), an underdiagnosed condition that carries high risks of breast, thyroid, and other cancers. The discovery of these genes will promote diagnosis and clinical management of CS while also assisting in predictive genetic testing and genetic counseling for a disease that is difficult to recognize and is characterized by small, noncancerous growths. Scientists at the Cleveland Clinic (Cleveland, OH, USA; www.clevelandclinic.org) performed genetic sequencing on DNA from individuals with CS who have none of the known genetic alterations associated with CS. State-of-the-art technology was used to identify a high prevalence of mutations in the phosphatidylinositol-4,5-bisphosphate 3kinase, catalytic subunit alpha (PIK3CA) and the alpha serine/threonine-protein kinase (AKT1) genes, which are involved in cancer-related signaling pathways. Germline mutations in the phosphatase and tensin homolog (PTEN) gene were found to cause 85% of CS when data from tertiary academic centers was analyzed. However, prospective data from the community over the last 12 years has revealed a 25% PTEN mutation frequency. PTEN is the phosphatase that has been implicated in a heritable cancer syndrome and subsequently in multiple sporadic cancers and developmental processes. The investigators found that 8 of T 55 LabMedica International June-July/2013 91 (8.8%) unrelated CS individuals without germline PTEN mutations carried 10 germline PIK3CA mutations and 2 (2.2%) had AKT1 mutations. These mutations result in significantly increased phosphorylation of AKT on the activation residue Thr308 (P-Thr308-AKT) and increased cellular phosphatidylinositol (3,4,5)-triphosphate (PIP3). These results suggest that PIK3CA and AKT1 are CS susceptibility genes. Charis Eng, MD, PhD, who is the Founding Director of the Lerner Research Institute’s Genomic Medicine Institute (Cleveland, OH, USA; www.lerner.ccf.org) said, “Geneenabled risk assessment and management begins with the identification of all the genes that, when mutated, account for as many or all the individuals with a particular syndrome, in this case CS. We started with only PTEN, and now we know that succinate dehydrogenase complex, subunit B, iron sulfur (SDHB/D), killin, p53-regulated DNA replication inhibitor (KLLN), PIK3CA, and AKT1 account for CS. Each also brings differing risks of breast, thyroid, and other cancers, and so this discovery directly aids genetic counseling and clinical management.” Cowden syndrome is a rare autosomal dominant inherited disorder characterized by multiple tumor-like growths called hamartomas and an increased risk of certain forms of cancer. The study was published on December 13, 2012, in the American Journal of Human Genetics. LINKXPRESS COM LMI-07-13 155 LabMedica to read this issue in interactive digital magazine format click to www.LinkXpress.com Automated Workstation Screens Urine Before Culture utomated systems have been developed to screen urine in order to eliminate those in which a culture is highly unlikely to yield clinically relevant results. A flow cytometry system that quantifies urine elements associated with urinary tract infection (UTI) has recently added a new element, the detection of “all small particles” (ASP) to improve the sensitivity of the assay. Scientists at the Veterans Affairs Medical Center (Houston, TX, USA; www.houston.va.gov) evaluated 1,000 urine specimens submitted consecutively that had a urine culture and urinalysis ordered on the same day. Specimens were tested for leukocyte esterase and nitrite with a chemistry dipstick analyzer and for white blood cells (WBC), ASP, bacteria, and yeast with an automated urinalysis system. Urinary samples were also tested on bacterial culture plates. There were 893 samples from male patients, A and 107 from females. There were 123 specimens from patients with indwelling urinary catheters. Of the 1,000 specimens evaluated 604 (60.4%) were culture positive at any level, that is equal to or greater than 103 colony forming units (CFU)/mL. Two combinations of results available on the iQ200 Workstation (Iris Diagnostics; Chatsworth, CA, USA; www.irisdiagnostics.com) were assessed for sensitivity, specificity, and negative predictive value (NPV). One method assessed leukocyte esterase, WBCs, nitrite, and the presence of few or more bacteria or yeast, a combination chosen to reflect the current parameters combination of manual urinalysis strips and standard microscopy. The other method assessed WBCs, the presence of few or more bacteria or yeast, and an ASP count of greater than 10,000, thus eliminating the redundancy of biochemical markers and focusing on the microscopic elements available on the iQ200. The iQ200 Workstation is used in combination with the Aution Max AX-4280 chemistry dipstick analyzer (Arkray; Edina, MN, USA; www. arkrayusa.com). The scientists found that the dipstick analysis added no advantage in a laboratory with microscopy. Although specificities were generally low, between 65.6% and 70.1%, the goal for screening samples is high sensitivity and NPV. The NPV approached 95% in comparison to the gold standard, but was further improved to greater than 99% when compared to the ordering clinician’s diagnosis or an expert review that assessed the indications in the record that a UTI was present. The authors concluded that ASP did not enhance specificity, sensitivity, or NPV. The iQ200 Workstation performed well by any standard, thus providing a reliable system by which to improve the use of laboratory resources. The study was published in the January 2013 issue of the journal Diagnostic Microbiology and Infectious Disease. Biomarkers Identified for Acute Kidney Injury Risk wo biomarkers have been discovered for the early assessment of acute kidney injury (AKI) that can be easily measured in urine. The two novel biomarkers can detect affected patients roughly 12 to 36 hours earlier than current tests for adult patients and have been subsequently validated using a clinical assay and compared to existing markers of AKI. Scientists at the Mayo Clinic (Rochester, MN, USA; www.mayoclinic.org ) led a multicenter study to evaluate nearly 340 biomarkers to find the two with the highest correlation to kidney injury risk. In the discovery phase, they enrolled 522 adults in three distinct cohorts including patients with sepsis, shock, major surgery, and trauma and examined over 300 markers. In the validation study, they enrolled 744 adult subjects with critical illness and without evidence of AKI at enrollment. The final analysis cohort was a heterogeneous sample of 728 T critically ill patients. Paired urine and blood samples were collected at enrollment and up to 18 hours later by standard methods and centrifuged. Biomarkers were measured with single or multiplexed immunoassays using standard enzyme-linked immunosorbent assays (ELISA). The platforms used were the Luminex 200 (Luminex; Austin, TX, USA; www. luminexcorp.com); the MSD SECTOR Imager 6000 (Meso Scale Discovery; Gaithersburg, MD, USA; www.mesoscale.com), or the Astute140 Meter (Astute Medical; San Diego, CA, USA; www. astutemedical.com). The two biomarkers with the highest correlation to kidney injury risk were the Insulin Growth Factor Binding Protein-7 (IGFBP-7) and Tissue Inhibitor of Metalloproteinases-2 (TIMP-2). The investigators also examined the performance of urine TIMP-2 and IGFBP7 compared to various other markers including urine kidney-injury LINKXPRESS COM LMI-07-13 156 marker-1 (KIM-1) and urine neutrophil gelatinaseassociated lipocalin (NGAL) in terms of discrimination between AKI of different severities and various non-AKI conditions including chronic kidney disease. Unlike existing markers, TIMP-2 and IGFBP7 showed clear separation between AKI and non-AKI conditions. The authors concluded that urine insulin-like growth factor-binding protein 7 (IGFBP7) and tissue inhibitor of metalloproteinases-2 (TIMP-2) are new biomarkers for AKI and perform better than existing markers for predicting the development of moderate or severe AKI within12 hours of sample collection. The risk for major adverse kidney events, such as death, dialysis, or persistent renal dysfunction within 30 days, was elevated sharply for [TIMP2]•[IGFBP7] above 0.3 and doubled when values were greater than 2.0. The study was published on February 6, 2013, in the journal Critical Care. LabMedica International June-July/2013 56 LabMedica for daily laboratory medicine news click to www.labmedica.com Real-Time PCR Instrument Designed for Clinical Diagnostic Laboratories Real-Time polymerase chain reaction (PCR) instrument can perform numerous diagnostic functions, including pathogen detection, gene expression analysis, SNP genotyping, copy number analysis, mutation detection, micro-RNA and other noncoding RNA analysis, and high-resolution melt analysis. Life Technologies Corp. (Carlsbad, CA, USA; www.lifetechnologies.com) has launched its Applied Biosystems QuantStudio Dx Real-Time PCR instrument. The instrument is CE-in vitro diagnostic (IVD) marked for use in Europe and represents a significant extension of Life Technologies’ product offerings in the diagnostics arena. The instrument is being released with CEmarked Quidel Molecular Assay for Clostridium difficile for detection of hospital-acquired infec- A tions. Additional Quidel Molecular infectious disease applications are currently under development and will be available in 2013, including an Influenza A + B Assay, a Human metapneumovirus (hMPV) + respiratory syncytial virus (RSV) assay, and a herpes simplex virus 1 and 2, and varicella zoster virus (chicken pox and shingles) assay. The instrument’s touch screen, reagent, sample tracking, and Laboratory Information Management Systems (LIMS) interface are simple to use, and flexible. Easily interchangeable thermal cycling blocks accommodate 96- or 384-well plates and a proprietary qPCR microfluidics card, which can perform 48 tests on eight samples simultaneously without the need for liquid-handling robots. The card can also be used to design and implement custom tests. Two software options are available on the instrument. The QuantStudio Dx Software runs in vitro diagnostic (IVD) tests in a secure mode with preset run and analysis parameters, while the QuantStudio Test Development Software enables development of custom tests and supports clinical research projects. Image: The QuantStudio Dx real-time PCR instrument for molecular diagnostics (Photo courtesy of Life Technologies). Pathogenic Yeasts Quantified by Flow Cytometry flow cytometric, single-stain approach to quantify Candida albicans has been investigated as an alternative to the standard viable plate count. In clinical settings, viable plate counts (VPC) are used to determine the patient’s microbial load, but it is labor intensive, time consuming, and only allows detection of those organisms that readily grow on solid media. Microbiologists at the University of Antwerp (Belgium; www.ua.ac.be) investigated a singlestain, flow cytometric approach for the enumeration of viable C. albicans cells. This single-stain strategy is based on the differences in the fluorescence intensity between viable and nonviable cells. A In this study, the cells with an intact membrane are considered alive, while the cells with a damaged membrane are defined as dead. Cell samples were stained with TO-PRO-3 iodide (TP3; Molecular Probes, OR, USA; www.invitrogen.com) which has a peak excitation at 642 nm with emission at 661 nm. All flow cytometry (FCM) studies were performed using a FACSCalibur flow cytometer (BD Biosciences, NJ, USA; www.bdbiosciences.com) equipped with a red diode laser (excitation at 633 nm) and a band pass filter measuring red fluorescence (FL4; range 653–669 nm). Molecular Probes’ CountBright absolute counting beads were added to the samples as an internal standard to calculate the exact volume analyzed by the flow cytometer. The authors concluded that the FCM quantification of viable cells using TP3 is a good alternative for the more time consuming and labor-intensive VPC. In comparison to other FCM techniques, this single-stain procedure is simple to apply and costeffective since only one dye needs to be added. Moreover, the unique excitation/emission profile of TP3 allows the application of additional dyes to assess other cellular parameters with minimal spectral overlap. The study is planned for publication in print on February 15, 2013, in the Journal of Microbiological Methods. Test Assists Risk Assessment, Early Detection of Lung Cancer simple physician-ordered blood test aids in risk assessment and the early detection of lung cancer in high-risk patients. The test detects the body’s immune response, in the form of autoantibodies (or immuno-biomarkers), to antigens produced by solid-tumor cells. A panel of tumor antigens is selected for their involvement in the development of lung cancer. Autoantibodies form and circulate in the body at all stages of the disease including Stages I and IIA, which are the earliest stages of lung cancer. Their measurement may signify the presence of cancerous cells. Early CDT-Lung has been approved by the New York State Department of Health. Utilizing a simple blood specimen, the test is directed at patients with a high risk of developing lung cancer, including heavy smokers, those exposed to suspect environmental conditions, and patients with a CT nodule under surveillance. The availability of EarlyCDTLung by Enzo Clinical Labs (New York, NY, USA; www.enzo.com) is the result of an agreement with its developer, Kansas-based Oncimmune (De Soto, KS, USA; www.oncimmune.com). The agreement provides for Enzo to be the only clinical laboratory located within its marketing area to make the test available to physicians. The new diagnostic test that assists in risk assessment and early detection of lung cancer is being made available to physicians in the New York met- A 57 LabMedica International June-July/2013 ropolitan market as well as New Jersey and Eastern Pennsylvania. Enzo is the only clinical laboratory making the test available in those areas. Enzo Clinical Labs is a full service clinical reference laboratory. The company combines the extensive testing capabilities of a large laboratory with the convenience and personalized service of a local one. Enzo was one of the area’s first laboratories to be awarded the College of American Pathologists (CAP) accreditation. This award indicates that Enzo passed a rigorous series of inspections more sophisticated than those mandated by licensing authorities. VISIT US AT: Booth: 5325 LINKXPRESS COM LMI-07-13 157 TECHNICAL LITERATURE F R E E S E RV I C E • S E RV I C E G R AT U I T • K U N D E N D I E N S T G R AT I S • S E RV I C I O G R AT U I TO • S E RV I Z I O G R AT U I TO MASS SPECTROMETERS RENAL FUNCTION ASSAY DETECTION KITS DOA SCREEN CUP POC TESTS D-tek HemoCue PRODUCT CATALOG Healgen The latest glucose point-of-care (POC) tests are developed for professional use, deliver lab-accurate results, and are approved for diagnosing various forms of diabetes. Products available include variable- and fixed-volume pipettes, pipette tips, pipette controllers, dispensers, syringes, stands and accessories. LINKXPRESS COM LINKXPRESS COM AB Sciex Dako The 3200MD series is designed as a combination of dependability, high performance, accuracy, and throughput, offering a costeffective lab solution for IVD. The Cystatin C assay offers fast and early detection of reduced renal function, and provides essential information for patient management. The BlueDot/BlueDiver Dot kits are designed for the detection of myositis/sclerodermarelated antibodies in human serum, with 12 different target antigens covered in one test. The one-step drugs of abuse (DOA) screen test cup offers simple and hygienic operation, and accurate results for testing of any combination of 16 different drugs. LINKXPRESS COM LINKXPRESS COM LINKXPRESS COM LINKXPRESS COM LMI-07-13 281 LMI-07-13 282 LMI-07-13 283 LMI-07-13 284 Handheld Mobile Device Checks Patients’ HIV Status handheld mobile device can check patients’ HIV status with just a finger prick, and synchronize the results in real time with electronic health records (EHRs). The technology takes a step toward providing remote areas of the world with diagnostic services traditionally available only in centralized healthcare settings. In a new study, a team including Curtis D. Chin, PhD, and Yuk Kee Cheung, PhD, designed a device that captures all the essential functions of enzymelinked immunosorbent assays, the most commonly used laboratory diagnostic for HIV. The authors show that the device performs laboratory-quality HIV testing in 15 minutes using finger-pricked whole blood. The study appears online in the 2013 edition of the American Association for Clinical Chemistry (www.aacc.org) journal Clinical Chemistry. The device also detects weakly positive samples, and uses cellphone and satellite networks to automatically synchronize test results with patient health A records from anywhere in the world. Because of the real-time data upload, this mobile device will allow policymakers and epidemiologists to monitor disease prevalence across geographical regions quickly and effectively. This could improve effectiveness in allocating medications to different communities, and patient care in general. Of the 34 million people infected with HIV worldwide, 68% of them live in sub-Saharan Africa, with South and Southeast Asia bearing the second greatest burden of disease. Many HIV-infected people in these regions are unable to be tested or treated because they cannot easily travel to centralized healthcare centers. This creates an extreme economic burden on already-poor nations, with the epidemic estimated to cause a 1.5% annual loss in gross domestic product each year for the worst affected countries. It has also created 16.6 million AIDS orphaned children who have lost one or both parents to the disease. VISIT US AT: Booth: 1839 LINKXPRESS COM LMI-07-13 158 LMI-07-13 285 HTL Lab Solutions LMI-07-13 286 Plasma Proneurotensin Levels Predict Breast Cancer simple blood test for the determination of proneurotensin (pro-NT) shows promise as a starting point for the prevention of breast cancer. The test will be available in Europe beginning in the second quarter of 2013. Sphingotec GmbH (Hennigsdorf, Germany; www.sphingotec.de/corporate-information) will launch the blood test, Sphingotest pro-NT, for the early prediction of breast cancer in women. The new test detects the release of the satiety hormone neurotensin and is applicable to all female individuals, regardless of genetic predispositions. Data demonstrating that determination of proneurotensin levels offers a substantial advantage in prediction of breast cancer was recently published in the October 10, 2012, Journal of the American Medical Association (JAMA). Neurotensin is a satiety hormone, released in gastrointestinal tract. The major stimulus for neurotensin production is fat. Breast cancer-cell growth is stimulated by neurotensin. Because neurotensin is a very unstable peptide, Sphingotec uses the stable precursor hormone proneurotensin as a surrogate biomarker for neurotensin. High levels of proneurotensin correspond with a three-fold risk of developing breast cancer or a recurrence of breast cancer. “Sphingotec will offer a simple blood test that can be used by gynecologists, family doctors and clinical laboratories for women to quantify their individual risk to develop breast cancer,” said Dr. Andreas Bergmann, CEO of Sphingotec GmbH. “We are confident this test will impact current prevention and early recognition programs for breast cancer and ultimately breast cancer incidence as well.” Sphingotec GmbH is a biotechnology company that aims to reduce incidence of severe diseases like cancer and diabetes by identification of susceptibility factors. The company explores biomarkers that are susceptibility factors for the development of severe diseases and provides starting points for prevention strategies. A LabMedica International June-July/2013 58 LabMedica for daily laboratory medicine news click to www.labmedica.com Test Being Developed to Diagnose Mild Cognitive Impairment utoantibody biomarkers in the blood can potentially be used to diagnose early stages of Alzheimer’s and Parkinson’s diseases. A grant of USD 799,800 from the Osteopathic Heritage Foundation at the University of Medicine and Dentistry of New Jersey-School of Osteopathic Medicine (Stratford, NJ, USA; http://som. umdnj.edu) will help expand earlier research conducted by Robert Nagele, PhD, director of the Biomarker Discovery Center (at the University). Dr. Nagele’s published research includes recent findings that identify specific autoantibody biomarkers in the blood for early diagnosis of Alzheimer’s and Parkinson’s diseases. The funded project will pursue three specific goals: to identify a small number of autoantibody A biomarkers that can accurately (90% or higher) diagnose MCI cases caused by early stage Alzheimer’s disease; to verify the accuracy rate with a larger scale study; and to construct and test a diagnostic kit that is maximally accurate for the broadest possible MCI patient population. If successful, the study will then apply for final US Food and Drug Administration (FDA; Silver Spring, MD, USA; www.fda.gov) approval of the test. Current approaches to MCI diagnosis rely on physical, neurological, and psychiatric examinations, laboratory tests, and a thorough review of the patient’s medications and medical history. Recently, great attention has been given to using neuroimaging technologies to detect structural changes in the brain before symptoms appear. However, these approaches require expensive equipment and technology and can require hospital visits, the injection of radioactive compounds, and the availability of radiologists with advanced training in these techniques. While current treatments for Alzheimer’s cannot stop the progression of the disease, several medications are capable of significantly enhancing brain performance and alleviating symptoms. A number of promising drugs are also currently under development and in clinical trials for the treatment of early Alzheimer’s disease. An easy-to-administer blood test for MCI would give pharmaceutical companies a way to identify patients for clinical trials who are at a very early stage of their disease and give researchers a nearly immediate way to monitor the effectiveness of medications under examination. Dye Checks Heparin Levels in Blood cientists have developed a dye that provides a quick and accurate method of checking heparin levels in the blood. The modified dye, which has excellent sensing capacity for heparin, pinpoints the anticoagulant’s level in human serum and has the potential to work more quickly than existing clinical methods for doing this. Because the dye can rapidly detect heparin levels, the scientists have named it “Mallard Blue,” (the same shade as the livery of the A4 Pacific Mallard, which holds the world speed record for a steam loco- S motive). Heparin is an important anticoagulant, which has a significant role in major surgery. The scientists in the department of chemistry at York University (Toronto, Canada; www.yorku.com) studied biological systems to discover how the dye would bind heparin even in highly competitive human serum. In the laboratory, the scientists modified existing dyes, which previously could not bind with heparin successfully under these challenging conditions. The scientists in the depart- ment of chemistry at York used inspiration from biological systems to allow the dye to bind heparin even in the highly competitive human serum. The modified dye, which has excellent sensing capacity for heparin pinpoints the anticoagulant’s level in human serum and has the potential to work more quickly than existing clinical methods for doing this. The work was published in the online edition of February 13, 2013, Journal of the American Chemical Society. The York scientists worked with a team led by Sabrina Pricl at the University of Trieste (Italy; www.units.it), who used high-level computer modeling to understand precisely how Mallard Blue binds to heparin so strongly. The next stage in this work will involve the incorporation of this new dye into a device for simple bedside read-out of heparin levels in blood. Vigorous Mixing May Effect Blood Results he effect of tube mixing techniques on the quality of diagnostic blood specimens collected in vacuum tube systems by venipuncture has been evaluated. The accurate mixing of blood in tubes with anticoagulant- or clot activator additives is essential for their effectiveness and may influence the reliability of test results and thereby affect the diagnostic outcome, the follow-up, and the therapeutic management of patients. Clinical biochemists at the University of Verona (Italy; www.univr.it) collected blood from 100 volunteers for routine coagulation, immunochemistry, and hematological testing from April 1, 2012, to May 1, 2012. The blood was put into six vacuum tubes: two 3.6 mL vacuum tubes containing 0.4 mL of buffered sodium citrate; two 3.5 mL vacuum tubes with clot activator and gel separator; and two 3.0 mL vacuum tubes containing dipotassium ethylenediaminetetraacetic acid (K2EDTA). All vacuum tubes, each of one additive type were processed through two different procedures. The standard procedure was blood specimens in K2EDTA- or sodium citrate-vacuum tubes were gently T 59 LabMedica International June-July/2013 inverted five times whereas the specimens in tubes with clot activator and gel separator were gently inverted ten times. The second procedure consisted of all the blood specimens were shaken up vigorously during three to five seconds independently of the additive type inside the tubes. Routine hematology, clinical chemistry, and immunochemistry and coagulation tests were performed. The results of the investigation for all the parameters showed that no significant differences were detected between the standard procedures versus the vigorous mix. Only a visual alteration with the presence of foam on the top was shown by all the tubes mixed vigorously before centrifugation. The vacuum tubes used were manufactured by Terumo Europe (Heverlee, Belgium; www.terumo-europe. com). The authors concluded that primary blood tubes vigorous mixing does not promote laboratory variability and suggest that similar evaluation should be done using other brands of vacuum tubes by each laboratory manager. The study was published in the February 2013 issue of the journal Clinical Biochemistry. LINKXPRESS COM LMI-07-13 159 TECHNICAL LITERATURE F R E E S E RV I C E • S E RV I C E G R AT U I T • K U N D E N D I E N S T G R AT I S • S E RV I C I O G R AT U I TO • S E RV I Z I O G R AT U I TO PCR INSTRUMENT RAPID TEST PCR TEST KITS Invitrogen Operon R-Biopharm The QuantStudio Dx instrument is designed with high performance, security, and reliability combined with the enhanced sensitivity and specificity of real-time PCR. The latest immunochromatographic test is intended for the diagnosis of infectious diseases such as Norovirus, Rotavirus, and rota-adeno in stool samples. The RIDA GENE kits diagnose gastrointestinal infections, hospitalacquired infections, and respiratory infections with results in less than two hours. LINKXPRESS COM LINKXPRESS COM LINKXPRESS COM LMI-07-13 287 LMI-07-13 288 LMI-07-13 289 IMMUNOASSAY ANALYZER Thermo Fisher Scientific Tosoh Bioscience Products include connective tissue diseases, RA, vasculitis / Goodpasture’s syndrome, GI, immunodeficiency, and antiphospholipid syndrome. LINKXPRESS COM LMI-07-13 290 The AIA-900 features enhanced reliability, continuous operation with walkaway capability, user-friendly operation, and a throughput of 90 tests per hour. LINKXPRESS COM LMI-07-13 291 HIV RAPID TEST Trinity Biotech The Uni-Gold HIV test for HIV 1/2 offers sample flexibility (whole blood, serum, plasma), three simple steps for use, and reliable results in 10 minutes. LINKXPRESS COM LMI-07-13 292 Spectroscopy Aids Breast Cancer Diagnosis S TOR Y IBU APPL R T DIS ED TO IT INV iffuse reflectance spectroscopy collects and analyzes light after it has interacted with the sample and this gives a unique spectrographic signature. This special type of spectroscopy has been used locate calcium deposits during a biopsy and could greatly improve the accuracy of diagnosing breast cancer. A team from Massachusetts Institute of Technology (Cambridge, MA, USA; www.mit.edu) and Case Western Reserve University (Cleveland, OH, USA; www.case.edu) have investigated whether diffuse reflectance spectroscopy can help to diagnose breast cancer. They examined 203 tissue samples within minutes of their removal from 23 patients. Each sample could be one of three types, each with its own spectrographic signature. It could be healthy, it could contain lesions with no microcalcifications, or it could contain lesions with microcalcifications. Diffuse reflectance and Raman spectroscopic measurements were performed using a portable, compact clinical system. This instrument contains a xenon flash lamp (370–740 nm) to obtain diffuse reflectance spectra, and a diode laser (830 nm) for Raman excitation. For spectral acquisition, the probe was gently brought into contact with the tissue specimen and the spectra were collected with room lights off. Spectra were recorded from multiple tissue sites of interest from each tissue core as well as from several cores in each biopsy, and thus the number of collected spectra varied from patient to patient. By analyzing these patterns, the team produced a computer algorithm that showed a success rate of D Your Source for Sterilization Accessories THERMO RESISTANT GLOVES Up to 37 cm in length 2013 CATALOG AVAILABLE STERILIZABLE INSTRUMENT & WORK-SURFACE MATS TURBO TURBO WASHING WASHING MACHINES MACHINES TRAYS TRAYS Thermo-Resistant (-60 °C to 300 °C) Fully Washable & Flexible Suitable for central sterilization services Sterilizable Heavy Silicone Cover & Transport Tablet MICRO MICRO INSTRUMENT INSTRUMENT MAT MAT SILICON SILICON INSTRUMENT INSTRUMENT MAT MAT Front WASHING WASHING TRAYS TRAYS MAT MAT Front ELIA PRODUCT LIST WASHING WASHING TRAYS TRAYS MAT MAT Back NEW! Back Back Front NEW! SILICONE SILICONE TABLET TABLET AND AND STEEL STEEL COVER COVER NETS NETS SILICONE SILICONE WASHING WASHING MACHINE MACHINE TRAY TRAY & & TABLET TABLET Exchangable Net STERILIZABLE STERILIZABLE WORK-SURFACE WORK-SURFACE MATS MATS Exchangable Nets 100% Silicone Size: 2400 x 1200 mm (3 mm thick) VICOTEX S.A. Place de la Gare 1 • 1009 Pully • Switzerland Tel: (41) 21-728-4286 • Fax: (41) 21-729-6741 E-Mail: [email protected] www.Vicolab.TradeMed.com LINKXPRESS COM LMI-07-13 160 97% in identifying tissue with microcalcifications. Normally a radiologist takes X-rays from three different angles to locate the tiny calcium deposits, then inserts a needle into the tissue and removes up to 10 tissue samples. A pathologist then tests these samples to see if they contain microcalcifications, but in 15% to 25% of cases, it is not easy to locate and take a tissue sample accurately, resulting in an inconclusive diagnosis. This means the patient has to have more X-rays and undergo more invasive surgery to retrieve further samples. Maryann Fitzmaurice, MD, PhD, cosenior author, said, “Microcalcifications are most often seen in breast tumors, but they can also occur, albeit rarely, in other types of cancer. If they don’t get them on the first pass, they usually don’t get them at all. It can become a very long and arduous procedure for the patient, with a lot of extra X-ray exposure, and in the end they still don’t get what they’re after, in one out of five patients. James Tunnell, PhD, an associate professor at the University of Texas (Austin, TX, USA; www.utexas.edu), who not involved in the study describes the study as a “good first step” toward a system that could have a big impact on breast cancer diagnosis. “This technology can be integrated into the system that is already used to take biopsies. It’s a very simple technology that can get the same amount of accuracy as more complicated systems.” The study was published online on December 24, 2012, in the journal Proceedings of the National Academy of Sciences of the United States of America (PNAS). LabMedica International June-July/2013 60 Edited by Tahir Pillay MBChB, PhD, FRCPath(Lon), FCPath(SA) IFCC members may send news to: Tahir Pillay MBChB, PhD, Head, Dept of Chemical Pathology, Faculty of Health Sciences, University of Pretoria, Private Bag Bag x323, Arcadia, 0007, South Africa Tel: (27) 012-319-2114; Fax: (27) 328 6000; Email: [email protected] NEWS MESSAGE FROM THE PRESIDENT by Dr. Graham Beastall, President, IFCC Reflections on EuroMedLab Milan 2013 his year is a busy one for IFCC Regional Congresses—in Milan (Europe), Cape Town (Africa), Bali (Asian Pacific), and Lima (Latin America). The first of these took place from May 19–23, in the impressive new Milano Congressi (MiCo) convention center, which claims to be the largest in Europe. For IFCC, the Milan experience started a few days before the congress as all IFCC Divisions and many IFCC Committees, Task Forces and Working Groups chose to hold meetings in association with EuroMedLab. This made for a convivial atmosphere in the buildup to the congress. The congress itself started with a spectacular concert from a full symphony orchestra and a large choir. This set the tone for the congress as the cultural attractions of Milan were shown to great effect during the week, culminating in a final gathering in the huge 15th century Castello Sforza, which is located at the heart of the city. The scientific program was excellent with a wide range of relevant topics considered in plenary lectures, symposia, educational workshops, and posters. A particular feature of the congress was the large choice of industry-sponsored workshops which were available each afternoon and which were of a high standard and well attended. The exhibition was fully subscribed and very busy. It was great to see some new IFCC Corporate Members exhibiting for the first time. All the exhibitors should be happy with the number of visitors they encountered. The numbers at the congress give a fair reflection of its success. There were almost 5,000 registered delegates from more than 100 different countries. In addition, there were another 2,000 visitors to the exhibition. It was especially pleasing to see so many young scientists and so many delegates from developing countries. The organization was impeccable and the overwhelming opinion is that it was a great success. Thanks go to Mauro Panteghini and the excellent organizing team that he led. For IFCC and EFLM (the Regional Federation in Europe) EuroMedLab Milano was a showcase event that demonstrated the importance of laboratory medicine to healthcare. All attendees will have found something at the congress to help them improve the quality of the service that they provide to their users. In addition, all attendees will have made new friends and shared in the international family of IFCC. T IFCC OFFICE Via Carlo Farini 81, 20159 Milan, ITALY Tel: (39) 02-6680-9912 • Fax: (39) 02-6078-1846 E-mail: [email protected] • Web: www.ifcc.org Office Hours: 9.00-13.00 and 14.00-18.00 Staff Members: Paola Bramati, Silvia Cattaneo, Silvia Colli-Lanzi 61 LabMedica International June-July/2013 Photo: A scene from the opening ceremony of EuroMedLab 2013 News from the World of the International Federation of Clinical Chemistry and Laboratory Medicine Visit www.ifcc.org for more information NEWS Catalan Society Expands Activity by Joan Nicolau, Editor, In Vitro Veritas n March 2012, the Catalan Association for Clinical Laboratory Sciences organized the 10th Catalan Congress of Clinical Laboratory Sciences. Other activities of the association included: Translation to Catalan of “Terminology in Analytical Measurement. Introduction to VIM 3,” which was published on the website; Meeting topic: “How to write a scientific paper”; Course on “Statistics applied to the Clinical Laboratory Sciences”; Course on “Update on the Clinical Laboratory Sciences”; Organization of the Course on Benchmarking; Publication of articles related to the Clinical Laboratory Sciences in the online journal of the Association, In vitro veritas; Authorship of the “Guide for the internal quality control of ordinal quantity measurements with control materials,” also found on the website. I • • • • • • • 10th Congress of the Catalan Association for Clinical Laboratory Sciences The 10th Congress was held during March 1-3, 2012, in Manresa (Spain). The program included several topics: recent advances in the diagnostics of diabetes mellitus, tuberculosis and allergy, genetics, bone metabolism, tumor markers, laboratory informatics, and prenatal screening, as well as the optimization of economic resources in the clinical labo- ratory. Lectures and round table discussions were held and posters were displayed during the Congress, which were discussed in one of the sessions. The meeting attracted around two hundred participants from all over the Catalan autonomous region of Spain. The language used was Catalan, an official language of the country. Several companies related to the field had exhibits of the latest diagnostic products and laboratory technology. The social program included a visit to the medieval Monastery of Saint Benet – the Photo: Dr. Mari Cruz Pastor, President of the Congress (left), Dr. Jaume venue of the Congress, and a Miró, President of the ACCLC (third from the right), and Dr. Jaume Trapé, General Coordinator of the Congress (right). gala dinner. Since its foundation in 1996, the ACCLC has organized a Congress every two 28-29, in Barcelona. The main objective of this years to discuss current topics and promote the Symposium was to debate the impact molecular genetics has on the organization of clinical laboratoquality practice of clinical laboratory sciences. ries and its evolution in the next future. Experts from 7th European Symposium several countries attended. The official languages of The VII European Symposium was held under the the Symposium were Catalan, Spanish, and English, IFCC auspices and the IUPAC sponsorship on May with simultaneous translation of the debates. Khosrow Adeli Named New Editor-in-Chief of the Journal “Critical Reviews in Clinical Laboratory Sciences” r. Khosrow Adeli, PhD, FCACB, DABCC, who currently chairs the IFCC Communications and Publications Division, was appointed as Editor-in-Chief of Critical Reviews in Clinical Laboratory Sciences in 2013, to succeed John R. Burnett. Critical Reviews in Clinical Laboratory Sciences is a leading publication in laboratory medicine, ranking 2/32. Dr. Adeli is currently the head and full professor of Clinical Biochemistry at the Hospital for Sick Children and the Departments of Biochemistry, and Laboratory Medicine & Pathobiology at the University of Toronto in Toronto (Canada). He is the Director of the Point of Care D LINKXPRESS COM LMI-07-13 161 Testing program at the Hospital for Sick Children in Toronto. Dr. Adeli is a fellow of the Canadian Academy of Clinical Biochemistry and a diplomate of the American Board of Clinical Biochemistry. Dr. Adeli served as the Editor-in-Chief of the Clinical Biochemistry journal for 7 years (1999–2006). He is an editorial board member of the Clinical Biochemist Reviews. He served (2006–2010) as the president of COMACC, the Commission on Accreditation in Clinical Chemistry, a North American organization responsible for accreditation of clinical chemistry training programs in the USA and Canada. LINKXPRESS COM LMI-07-13 162 LabMedica International June-July/2013 62 LINKXPRESS .COM LINKXPRESS .COM LMI-07-13 181 LINKXPRESS COM LMI-07-13 163 LMI-07-13 182 News from the World of the International Federation of Clinical Chemistry and Laboratory Medicine Visit www.ifcc.org for more information NEWS Nominations Invited for Triennial IFCC Distinguished Awards to Be Presented at IFCC-WorldLab 2014 by Howard Morris, IFCC vice president, Chairman, IFCC Awards Committee s you are aware, the IFCC confers several distinguished awards to scientists and clinicians who work in clinical chemistry and laboratory medicine or related disciplines. These triennial awards are the highest honors that our federation can bestow to colleagues worldwide in recognition of their outstanding achievements, to publicize their exceptional research and other contributions that have improved medical and healthcare, and to stimulate and encourage other scientists to accelerate their efforts in advancing clinical chemistry and laboratory medicine. A On behalf of IFCC and its Awards Committee, I am pleased to call for nominations for the following seven IFCC distinguished awards for presentation at the IFCC Congress in June 2014, Istanbul (Turkey). These seven awards for 2014 are listed below and a more detailed description of them including the former honorees can be found on the IFCC website at: www.ifcc.org/about-us/2014-ifcc-awards IFCC Distinguished Clinical Chemist Award, sponsored by Beckman Coulter; IFCC-Henry Wishinsky Award for Distinguished • • International Services, sponsored by Siemens; IFCC Award for Distinguished Contributions in Education, sponsored by Abbott Diagnostics; IFCC-Abbott Award for Significant Contributions in Molecular Diagnostics, sponsored by Abbott Diagnostics; IFCC Distinguished Award for Laboratory Medicine and Patient Care, sponsored by Unilabs; IFCC-Robert Shaffer Award for Outstanding Achievements in the Development of Standards for Use in Laboratory Medicine, sponsored by NIST-CLSI; IFCC-Young Investigator Award, sponsored by IFCC. Nominations are welcome from the President or National Representative of the nominees’ national society, which should be a full member of the IFCC. Each nomination should contain (1) a statement as to the reasons for nomination, (2) a full CV of the nominees including a bibliography, and (3) other letters of support (optional). They should be sent to Ms. Colli-Lanzi of the IFCC Office ([email protected]). The closing date for receipt of nominations is November 30, 2013. Please do not hesitate to write to Ms. Colli-Lanzi or me ([email protected]) if you have any queries. The IFCC Awards Committee 2012-2014: Chair: H. Morris (AU); Members: J.C. Forest (CA); M. Jouma (SY); L. Lai (MY); R. Sierra-Amor (MX); G. Sypniewska (PL). • • • • • Ukrainian Society Elects New Executive Board by Dr. Igor Mishunin, PhD, Board Member, National Representative for IFCC & EFLM he Ukrainian Society of Clinical Laboratory Diagnostics’ (USCLD) new Executive Board was elected at the society’s annual meeting: Dr. Valeryj Dejev, President; Prof. Adel Rudenko, Head of Board; Dr. Kateryna Osipchuk, Board Member, Treasury; Dr. Igor Mishunin, Board Member and National Representative for IFCC & EFLM; Prof. Danylo Gluzman, Board Member; Dr. Sergey Verevka, Board Member; Prof. Zoltan Fabry, Board Member; Prof. Tetiana Gavrylenko, Board Member. T • • • • • • • • New Executive Council Takes Over at Pakistan Society he new executive council has been elected by the members of Pakistan Society of Chemical Pathologists (PSCP) for the 2013–2015 term. Prof. Dilshad Ahmed Khan, Dr. Sameena Ghayur, and Prof. Rizwan Hashim have been elected President, Vice President and Secretary / Treasurer respectively for this term and they will be the national representatives. Their contact details are shown hereunder: T • Prof. Dilshad Ahmed Khan: President [email protected] • Dr. Sameena Ghayur: Vice President [email protected] • Prof. Rizwan Hashim: Secretary/Treasurer [email protected] LabMedica International June-July/2013 64 News from the World of the International Federation of Clinical Chemistry and Laboratory Medicine Visit www.ifcc.org for more information NEWS Vietnamese Society to Mark 50th Anniversary with Jubilee Conference in September by Prof. Dr. Hoang Van Son, Executive Committee of the VACB, National Representative of the VACB to the IFCC he Vietnamese Association of Clinical Biochemists (VACB) celebrates the 50th Anniversary of its foundation this year, 2013. The Foundation Congress was held on June 1, 1963, at the Viet-Xo Huu nghi Hospital (Hospital of Vietnam-Soviet Union Friendship) in Hanoi, under the decision of the Minister of Health Dr. Pham Ngoc Thach. The VACB is working within the framework of the Vietnam General Medical Association (VGMA). The first VACB President was Dr. of Pharmacy Tran Thi An, Head of Department of Biochemistry of the University of Medicine and Pharmacy of Hanoi. The official journal of the VACB, the Medical Biochemistry, appeared in 1963, 50 years ago. During 50 years of development, the Vietnamese Association of Clinical Biochemists has been progressing, expanding rapidly in the Health care system for the Vietnamese people. Nowadays, there are 18 Professors and A/Professors, many Philosophy Doctors of Medicine, of Pharmacy, hundreds of bachelors working in the many Universities of Medicine, of Pharmacy, numerous Hospitals in Hanoi, Ho-Chi-Minh City, and in 63 provinces. In other institutions, there are additional VACB members. The VACB comprises a number of Societies: Society of Clinical Biochemistry of Hanoi and Northern T Provinces, Society of Clinical Biochemistry of Ho-Chi-Minh City and Southern Provinces, Society of Clinical Biochemistry of Center of Vietnam, Branch Society of Molecular Biology, Branch Society of Proteomics, Branch Society of Immunology and Allergology, Branch Society of Toxicology. Numerous advanced techniques in Molecular Biology, Enzymology, Immunology, Oncology, Proteomics, Endocrinology, Toxicology, POCT, etc. have been implemented in the last years of the 20th century and in this century. There are four High Schools for technicians that have been training many technicians, especially for the hospitals. The Departments of Biochemistry of the Universities of Medicine are important incubators for PhD theses. Many studies have appeared in the International Congresses and in some international medical Journals. The VACB has been a member of the IFCC since 1989 and a member of the APFCB since 1990; International cooperation has been flourishing since that time. Thanks to the precious support of the IFCC, the APFCB, the IATDMCT, of some Associations such as the Australasian Association of Clinical Biochemists (AACB), the French Society of Clinical Biology (SFBC), and the VACB has implemented the QA and QC Programs successfully, as Photo: The senior members of the Vietnamese Association of Clinical Biochemists (VACB), half of them have attended the Founding Congress of the VACB. well the IFCC Professional Exchange Program: five VACB members have been trained in Hong Kong, Australia, and Sweden. The VACB has organized 10 National Congresses and 2 or 3 Scientific Conferences every year. Prof. Dr. Hoang Bich Ngoc is working as the current VACB President; General Secretary: Prof, Dr. Pham Thien Ngoc; National Representative of the VACB to the IFCC: Prof. Dr. Hoang Van Son. The Jubilee 50 Anniversary Meeting will be organized on September 6–7, 2013, in Hanoi, together with the Scientific Conference. The VACB wishes to meet international colleagues in this important event. You are welcome! IFCC Welcomes New Corporate Members Instrumentation Laboratory Instrumentation Laboratory (IL, USA), founded in 1959, is a worldwide developer, manufacturer, and distributor of in vitro diagnostic instruments, related reagents, and controls for use primarily in hospitals and independent clinical laboratories. Company product lines include Critical Care systems, Hemostasis systems, and Information Management systems. IL’s GEM product offerings, part of the Critical Care line, include the GEM Premier 4000 analyzer with Intelligent Quality Management (iQM), GEM Premier 3500, GEMweb Plus Custom Connectivity, and complimentary products GEM PCL Plus, a portable coagulation analyzer the ACL TOP Family of Hemostasis Testing Systems, fully automated, high-productivity analyzers, including the ACL TOP 700, ACL TOP 700 LAS, 65 LabMedica International June-July/2013 ACL TOP 700 CTS, ACL TOP 500 CTS, and ACL TOP 300 CTS. IL also offers the ACL AcuStar, ACL ELITE, other Hemostasis analyzers, and the HemosIL line of reagents. IL is based in Bedford (MA, USA; www.ilus.com). Shanghai Zhicheng Biological Technology Shanghai Zhicheng is an innovative Chinese company devoted to manufacturing and marketing in vitro diagnostic (IVD) tests for use in clinical laboratories. The company has been focusing on promoting the quality of their products by serious and pragmatic R&D, and strict QC according to ISO 13485 and ISO 9001 since its foundation by Mr. Wanghui in 1995. Company products are distributed to more than 1,000 laboratories in China under the the well-known brand of “DENUO.” Web: www.shzhicheng.com LINKXPRESS COM LMI-07-13 165 EFLM CORNER European Federation of Clinical Chemistry and Laboratory Medicine Edited by Dr. Bernard Gouget Milan 2013: In the Wild World of Laboratory Medicine by Dr. Bernard Gouget SFBC-EFLM Representative; IFCC Treasurer; Secretary General, International Francophone Federation of Clinical Biology and Laboratory Medicine (FIFBCML) ilan, the capital of Lombardy, is the largest industrial city of Italy with diverse industrial sectors. It is a magnetic point for designers, artists, photographers, and models. Milan has an ancient city center with high and interesting buildings and palazzos, which is why so many people from all over the world want to see the city of glamour. The week of May 19, 2013, Milan was the city of Lab Medicine: an interdisciplinary scientific platform bringing specialists in Laboratory Medicine with an academic, clinical, and industrial background together. EuroMedlab Milano 2013, which represents the most important European congress in the field of Lab Medicine, was a very successful event. According the Emmezeta statistics, the number of delegates attending for one or more days was 4,706 from 101 countries. Delegates from outside Europe accounted for 20%. Attendees younger than 35 years of age were 393 (8%). The 82 major exhibitors covered an area of 3,500 m2. Two hundred outstanding international speakers contributed to the high scientific level of the 5 plenary sessions and 23 symposia that related to a specific disease or pathophysiologic conditions combining clinical laboratory, research, and future development with their own clinical experience. Forty-five educational workshops were organized in close collaboration with diagnostic companies and the delegates presented 1,239 posters. Thank you Prof. Mauro Panteghini, president of EML Milano 2013, and congratulation to the congress organizing committee, scientific program committee, SIBioC team and MZ congress organizing secretariat staff for this outstanding scientific and cultural program, it was a wonderful opportunity to meet old and new friends with the common interest in promoting the added value of Lab Med. It was also a good opportunity to visit the city of Milano. Many participants visited the Duomo and Santa Maria delle Grazie, which is one of the most famous churches in Milan—a Dominican convent included in the UNESCO World Heritage sites list. The church is famous above all for the mural of the Last Supper by Leonardo da Vinci, which is situated inside the refectory of the convent. The cultural and social evening at the Castello Sforzesco on Wednesday night was an extraordinary experience. Before the luxurious Italians buffets, it was possible to visit the Sforza Castle museum open until late for EuroMedLab guests and to admire the Michelangelo’s statue named Pieta Rondanini, the sculpture on which Michelangelo worked until six days prior to his death, on February 18, 1564. At the end of the evening, the show of the flying acrobats “Sonics” was simply breathtaking. During the EFLM general assembly, Athens was choosen to organize EuroMedlab 2017. Congratulations to Alexander Halliassos and the Greek delegation. It is also important to congratulate the newly elected members of the EFLM Executive Board and thank the outgoing members of the EFLM EB, Volunteer leadership and is often underappreciated. Thank you all as well! After Milan, it is a big challenge to organize such a sustainable, high level and dynamic forum. Together with Prof. Joelle Goudable and Prof. Philippe Gillery on behalf of the French Society of Clinical Biology (SFBC) and of the Congress Organizing Committee, it is a great pleasure to invite both academics and specialists in Lab Medicine and partners to attend the 21st IFCC-EFLM European Congress of Clinical Chemistry and Laboratory Medicine (EuroMedLab Paris 2015). This unique event, including the Journées Internationales de Biologie (JIB) 2015, will be held in Paris (France), on June 21-25, 2015 in the Palais des Congrès de Paris, one of the French capital’s legendary venues. In 1789, it was the French revolution, EuroMedlab Paris 2015 will be the “Revolution in Lab Medicine” linking scientific and other evidence to shape tomorrow’s development in the field of Lab Medicine and global health placing the patient at the heart of all our efforts and discussions. M Photo: Dr. Bernard Gouget launching EuroMedLab Paris 2015 at the closing ceremony of EuroMedLab 2013. LabMedica International June-July/2013 66 EFLM CORNER European Federation of Clinical Chemistry and Laboratory Medicine French Society of Clinical Biology (SFBC): A Review of Scientific Activities by Véronique Ducros, Jean-Philippe Lavigne, Sylvain Lehmann, for the Scientific Committee he SFBC, which was founded in 1942, regroups nearly 1,000 members working in private or public medical laboratories. Programs and activities of the SFBC are intended to enable medical biologists and laboratory specialists to operate efficiently with a high standard of professional and technical competence improving the quality of care and benefits for the patient by providing a clear vision of the key role of clinical chemistry and laboratory medicine. The Scientific Committee (SC) aims are to establish and to improve the standards for scientific, clinical, and technical aspects of best laboratory practices. SC plays also an important role in bridging basic science, applied science, and clinical care. Formal links are established with research institutions, regulatory bodies, and other national clinical societies in specific fields (hematology, nephrology, endocrinology, and the like). A key task of the SC deals with the creation and the monitoring of multidisciplinary working groups (WG). They are composed of experts in the different area of clinical biology and their goal is to provide to the community, updated information on specific subjects, recommendations, and guidelines taking into account the needs of the patients and practitioners, as well as public health issues. The topics of the WG originate from both the members of the SBFC and the SC. Summary of the activities of the different WG are available on the website of the SFBC (www.sfbc.asso.fr). A more complete access to the work of the working groups (constitution of groups, reports, manuscript, etc.) is available for SFBC members. This article provides a synthetic vision of the different groups, their work, and their contribution as follows: Accreditation requirements for Clinical Laboratory: This WG is devoted to developing recommendations for implementing the required ISO 15189 in all French medical laboratories. These recommendations T • are compiled in three recently published guides for certification. Laboratory automation and standardization: This WG aims to prepare technical guides and standardized description for analytical systems, robotics, computerization, and automation of medical biology laboratories. Their conclusions are published in the form of detachable leaflet, the last one focusing on “Middleware.” Toxicology management in emergency unit: This WG updated and outlined the different protocols for extraction and chromatography techniques implemented to carry out toxicological screening (in serum and urine) in case of severe poisoning. They are also at the origin of a common QC, which can be used by most laboratories dealing with toxicology. Monitoring of blood glucometers: This new WG was designed to assess different readers of blood glucose and discussed how to deploy them in hospitals, their monitoring (QC), and their use based on the current recommendations in endocrinology. Place of mass spectrometry in clinical biology: This new WG aims at reviewing the interest and limits of mass spectrometry in different fields: clinical chemistry, bacteriology, toxicology, et al. It will provide information on the future of the technique and its compatibility with accreditation requirements. Pharmacogenomics and predictive medicine: This WG is intended to review the available pharmacogenomic applications for different clinical applications (e.g., cytochromes and VKORC1 isoforms in anticoagulant treatments). Two main areas of interest are emerging within the WG: the Next Generation Sequencing and pharmacogenetics-pharmacogenomics and its applications in the clinic. Level of Evidence (LOE) of pros-tate cancer biomarkers: This WG is studying the LOE of two groups of biological markers (serum: PSA and derivatives; urinary: PCA3 • • • • • • Society Name Change: “SIBioC – Laboratory Medicine” uring its most recent general assembly on April 15, 2013, an amendment to the scientific society’s by-laws was ratified by the board and the full membership. While leaving the glorious SIBioC acronym unchanged, they changed the society’s name to “SIBioC – Laboratory Medicine” (The Italian Society of Clinical Biochemistry and Clinical Molecular Biology). As with the previous change that led the IFCC to become the “International Federation of Clinical Chemistry and Laboratory Medicine,” this change responds to a recommendation from D 67 LabMedica International June-July/2013 the European Federation of Clinical Chemistry and Laboratory Medicine (EFLM) inviting all members to start including laboratory medicine in their title. This request is the logical consequence of last year’s decision by EFLM member societies on the most appropriate descriptive name for our profession: “specialists in laboratory medicine.” This is the first stage in a two-step process to enable us to progress toward recognition of the profession under a European commontraining framework. and fusion genes) in early diagnosis, support, assessment of aggressiveness and their best uses in humans over 40 years. Fetal alcohol syndrome: This group is working on diagnostic practices and biological markers currently used for monitoring of maternal pregnancy alcohol and screening/diagnosis of fetal impairment in utero and at birth. Natriuretic peptides: This WG has two objectives: review the interest and the use of these analytes in clinical practice; perform an analytical assessment of the BNP/NTproBNP assays. CSF biomarkers in Alzheimer’s disease: This WG will review the use of the most relevant biomarkers in the diagnosis of Alzheimer’s disease. It will also help to standardize the preanalytical phase between laboratories and to implement internal and external quality controls. New Troponin assays use in emergency unit: This new WG will assess the interest of the new Troponin kits and will propose recommendations for their best use in emergencies. • • • • Biomarkers of vascular calcification in kidney disease: This group will compare the interest of the new emerging biomarkers of the vascular risk in the chronic renal insufficiency (FGF23, Klotho, OPG/RANKL/TRAIL, and others) and will propose recommendations for kidney disease and mineral metabolism disturbances follow-up. Urinary biomarkers of renal function: The WG will review the literature to compare the urinary biomarkers of renal dysfunction. Analytical aspect will be also addressed through a multisite evaluation that will focus on the limit of detection and eventually on the clinical interest. The SC task is also to select and validate the national candidate for the international working groups (IFCC, EFLM, et al). It is also involved in the organization of scientific events and in particular the annual scientific meeting of the SFBC. Finally, the SC participates in the selection of annual SFBC Award recipients of clinical chemists or laboratory scientists who work in the field of clinical chemistry, laboratory medicine, and clinical laboratory science. • INDUSTRY NEWS EKF Diagnostics Launches Division for Molecular Cancer Diagnostics KF Diagnostics (Cardiff, UK; www.ekfdiagnostics.com), a worldwide manufacturer of point-ofcare (POC) diagnostic tools, organ injury biomarkers and assays, has launched a new division focusing on molecular and companion diagnostics. The company will develop the technologies for cancer gene detection through its recent acquisition of the UK-based 360 Genomics. EKF Molecular has been set up to offer products with the potential to change current DNA extraction and detection practices, allowing EKF to address the surging companion diagnostics market. EKF Molecular’s lead product, PointMan, is a real-time PCR technology that provides sensitive detection for cancer mutations. PointMan is effective in amplifying the sequence of interest while suppressing amplification of the wild type. The resulting sample is enriched for the mutation thus offering high sensitivity in a variety of sample types. EKF Molecular expects to follow the launch of PointMan with additional E products later this year. Xtract, the second product in EKF’s range, offers users in the pharmaceutical, academic, and diagnostic sectors a quicker, less expensive, and automatable platform for DNA extraction technology. Julian Baines, CEO of EKF, said, “Companion diagnostics, is a situation where everyone wins: patients get better diagnosis which leads to better treatments and survival rates; doctors see increased patient safety and can make better informed decisions about treatments; healthcare providers and insurance companies will see better patient outcomes through reduced costs and pharmaceutical companies will be able to gain easier regulatory approval and a quicker time to market for their drugs.” EKF Diagnostics Holdings plc specializes in the development, production, and worldwide distribution of POC blood analyzers for use in the detection and management of diabetes, anemia, lactate and kidney related diseases. Life Technologies Buys Korean Distributor ife Technologies Corp. (Carlsbad, CA, USA; www.lifetechnologies. com) announced the acquisition of an instrument distributor Life Science Korea (LSK; Seoul, Republic of Korea; www.lgls.com). LSK has been Life Technologies’' primary instrument distributor since 1994 and holds distribution rights to Applied Biosystems products, including nextgeneration sequencing instruments, Sanger sequencing systems, forensics, and polymerase chain reaction (PCR) products. LSK serves more than 1,000 customers in academia, government, pharmaceutical, biotech, hospitals, and applied markets. Under the acquisition terms, the LSK name will become part of Life Technologies Korea. No other terms of the deal were announced. The combination of LSK and Life L Technologies will continue to build a strong Life Technologies brand in Korea to stimulate fast and sustainable growth and be well positioned to take advantage of Korea’s focus on developing biotechnology. In the past five years, South Korea has shown solid growth in the biotechnology industry and with the Korean government's Bio-vision 2016 initiative, it is expected that the country will continue to invest heavily in the life sciences industry. Life Technologies is a global biotechnology company with portfolio of 50,000 end-to-end solutions secured by more than 5,000 patents and licenses that span the following biologic spectrum-scientific exploration, molecular diagnostics, 21st century forensics, regenerative medicine, and agricultural research. Ventana and Barco in Alliance for Digital Pathology Viewing entana Medical Systems, Inc. (VMSI; Tucson, AZ, USA; www. ventana.com), member of the Roche Group, has announced the signing of a worldwide agreement with healthcare imaging expert Barco, Inc. (Kortrijk, Belgium; www.barco.com) to provide Barco's leading diagnostic and clinical review display systems for use with Ventana’s “Virtuoso” image and workflow management system, offering a turnkey solution that provides consistent whole slide image viewing with efficiency. The advantages of medical grade displays over commercial off-the-shelf monitors include enhanced contrast; V color accuracy and sharpness; prolonged image stability over time; and the ability to calibrate the screen for optimal viewing. Barco's Coronis Fusion 4MP DL diagnostic color display and MDRC-2124 wide-screen clinical monitor offer these capabilities and more for precise, high confidence viewing. Barco's system supports effortless and precise panning and zooming on whole slide images. Moreover, the display system includes Barco's MediCal Awe, an automated, real-time calibration system that provides high image quality and consistency across the screen for the life of the display. Analytik Jena Acquisition Focuses on Sepsis Diagnostics nalytik Jena (Jena, Germany; w w w. a n a l y t i k - j e n a . d e / e n ) acquired all the assets of the insolvent company SIRS-lab GmbH (Germany, www.sirs-lab.de). SIRS-Lab, a company that develops molecular diagnostics methods and testing systems for lifethreatening infections such as sepsis, filed for insolvency in December 2012. Analytik Jena AG, which will also obtain the entire range of product expertise, including more than 50 patents and 10 employees at the Jena site, will be entering the worldwide growth market of sepsis diagnostics, continuing the development work and expertise of SIRS-Lab in this field. Analytik Jena in its stronger focus on routine diagnostics will work more closely with hospital and clinical part- A ners in the process. SIRS-Lab was founded in 2000 as a spin-off of the Friedrich Schiller University at the Jena Sepsis Competence Center by a team of scientists. The aim of the scientists was to combat the high mortality rate associated with sepsis (blood poisoning). With the product LOOXSTER, the company developed a patented technology for concentrating bacterial and fungal DNA in diagnostic samples. This product is used in VYOO, the CE marked product for sepsis diagnostics. SIRS-Lab was also developing a gene expression product (SIQNATURE) to indicate the body’s immune response to an infection. A related test developed by SIRS-Lab is almost ready for the market. LabMedica International June-July/2013 68 INTERNATIONAL CALENDAR For a free listing of your event, or a paid advertisement in this section, contact: International Calendar • LabMedica P.O.Box 802214, Miami FL 33280-2214, USA Fax: 1-954-893-0038 • E-mail: [email protected] Yellow-highlighted listings are available at US$ 300 for a one-year period. Please mail check with your event’s details to above address. ASHG 2013 - Annual Meeting of the American Society of Human Genetics. Oct 22-26; Boston, Massachusetts, USA; Web: www.ashg.org 7th National Congress of Clinical Laboratory. Oct 23-25; Bilbao, Spain; Web: www.labclin2013.es APFCB 2013 - 13th Cong. Asian-Pacific Fed. for Clinical Biochemistry. Oct 27-30; Bali, Indonesia; Web: http://apfcbcongress2013.org COLABIOCLI 2013 - XXI Congreso LatinoAmericano de Bioquimica Clinica. Oct 29-Nov 1; Lima, Peru; Web: http://colabiocli-lima2013.org NOVEMBER 2013 AUGUST 2013 FIME 2013. Aug 7-9; Miami Beach, FL, USA; Web: www.fimeshow.com 26th Annual Meeting of the Association of Medical Laboratory Immunologists (AMLI). Aug 10-13; Savannah, GA, USA; Web: www.amli.org ISEH 42ND Annual Scientific Meeting. Aug 2225; Vienna, Austria; Web: https://iseh.site-ym.com 42nd ISEH Annual Scientific Meeting - Society for Hematology and Stem Cells. Aug 22-25; Vienna, Austria; Web: https://iseh.site-ym.com 25th European Congress of Pathology. Aug 31-Sep 4; Lisbon, Portugal; Web: www. esp-congress.org SEPTEMBER 2013 AABB Annual Meeting & CTTXPO Advancing Trasfusin and Cellular Therapies Worldwide. Sep 1-4; Denver, CO, USA; Web: www.aabb.org 25th National Congress of Biochemistry of the Turkish Biochemical Society (TBD). Sep 3-6; Izmir, Turkey; Web: www.biyokimyakongresi.org AACB 51st Annual Scientific Conference of Australasian Association of Clinical Biochemists. Sep 16-19; Gold Coast, QLD, Australia; Web: www.aacb.asn.au ASCP 2013 - American Society for Clinical Pathology Annual Meeting. Sep 18-21; Chicago IL, USA; Web: www.ascp.org/ascp2013 52nd Annual ESPE Meeting - European Society of Paediatric Endocrinology. Sep 19-22; Milan, Italy; Web: www.jointmeeting2013.org AACC 2013 - Annual Meeting, American Association for Clinical Chemistry. Sep 20-25; Houston, TX, USA; Web: www.aacc.org 2nd Croatian Congress of Laboratory Diagnostics. Sep 21-25; Sibenik, Croatia; Web: http://hlu.hr 47th Brazilian Congress of Clinical Pathology / Laboratory Medicine. Sep 22-25; Sao Paulo, Brazil; Web: www.cbpcml.org.br MipTec Conference & Exhibition 2013. Sep 2426; Basel, Switzerland; Web: www.miptec.ch ExpoMedical 2013. Sep 25-27; Buenos Aires, Argentina; Web: www.expomedical.com.ar BCLF 2013 - 21st Annual Meeting, Balkan Clinical Laboratory Federation. Sep 25-28; Budva, Montenegro; Web: http://bclf2013.org 61st Annual Scientific Meeting of the American Society of Cytopathology. Nov 8-12; Orlando, FL, USA; Web: http://cytopathologymeeting.org The 13th Euroconference on Clinical Cell Analysis. Nov 12-14; luxembourg, luxembourg; Web: www.escca.eu Analytica Anacon India 2013. Nov 12-14; Mumbai, India; Web: www.analyticaindia.com JIB 2013 - Journées Internationales de Biologie. Nov 13-15; Paris, France; Web: www.jib-sdbio.fr Pathology Update 2013: State-of-the-Art Diagnostic Approaches to Surgical Pathology. Nov 13-16; Montreal, Quebec, Canada; Web: www.ascp.org Association for Molecular Pathology (AMP) Annual Meeting 2013. Nov 14-16; Phoenix, AZ, USA; Web: www.amp.org 39th Annual Meeting of the American Society for Histocompatibility and Immunogenetics (ASHI). Nov 18-22; Chicago, IL, USA; Web: www.ashi-hla.org MEDICA 2013. Nov 20-23; Düsseldorf, Germany; Web: www.medica.de India Lab Expo 2013. Nov 21-23; Hyderabad, India; Web: www.indialabexpo.com DECEMBER 2013 California Society of Pathologists 66th Annual Convention. Dec 3-7; San Francisco, CA, USA; Web: www.calpath.org/events.php 55 Annual American Society of Hematology (ASH) Meeting and Exposition. Dec 7-10; San Diego, CA, USA; Web: www.hematology.org Annual Meeting of the American Society for Cell Biology. Dec 14-18; New Orleans, LA, USA; Web: www.ascb.org/meetings/index.cfm JANUARY 2014 Arab Health / Arab MedLab 2014. January; Dubai, UAE; Web: www.arabhealthonline.com The British Fertility Society - BFS Annual Meeting. Jan 8-9; Sheffield, UK; Web: www.britishfertilitysociety.org.uk Protein Purification & Recovery - Cambridge Healthtech Institute’s Sixth Annual Meeting. Jan 13-14; Palm Springs, CA, USA; Web: www.chi-peptalk.com SLAS 2014, Society of Laboratory Automation and Screening. Jan 18-22; San Diego, CA, USA; Web: www.slas2014.org OCTOBER 2013 MARCH 2014 9th EFLM Symposium for Balkan Region. Oct 3-5; Belgrade, Serbia; Web: www.dmbj.org.rs APCCB 2013 - 13th Congress of the AsiaPacific Federation for Clinical Biochemistry and Laboratory Medicine. Oct 6-9; Bali, Indonesia; Web: www.apccb2013.org BIOTECHNICA 2013. Oct 8-10; Hannover, Germany; Web: www.biotechnica.de 69th Annual Meeting of the ASRM - American Society for Reproductive Medicine. Oct 12-17; Boston, Massachusetts, USA; Web: www.asrm.org 39th Annual Symposium and Congress of the National Society for Histotechnology (NSH). Oct 12-15; Providence, RI, USA; Web: www.histoconvention.org CAP 2013 – The Pathologists’ Meeting College of American Pathologist. Oct 13-16; Kissimmee, FL, USA; Web: www.cap.org Analytica China 2013. Oct 16-18; Shanghai, China; Web: www.analyticachina.com World Vaccine Congress 2014. Mar 24-26; Washington, DC, USA; Web: www.terrapinn.com 69 LabMedica International June-July/2013 APRIL 2014 Experimental Biology 2014. Apr 26-30; San Diego, CA, USA; Web: http://experimental biology.org Biomarkers & Diagnostics World Congress 2014. Apr 30-May 2; Philadelphia, PA, USA; Web: www.biomarkerworldcongress.com MAY 2014 16th European Congress of Endocrinology. May 3-7; Wroclaw, Poland; Web: www.ece2014.org EuroPRevent - European Society of Cardiology. May 8-10; Amsterdam, Netherlands; Web: www. escardio.org ECCMID 2014 – 24rd Eur. Cong. of Clin. Microbiology & Infectious Diseases. May 1013; Barcelona, Spain; Web: www.congrex.ch LabMedica International Vol. 30 No. 4 • 6-7/ 2013 ADVERTISING INDEX Inq.No. 149 – – 143 147 157 150 111 – 155 130 126 163 162 127 172 152 153 142 124 112 144 141 Advertiser Page 77 Elektronika . . . . . . . . . . . .49 9th EFLM Symposium . . . . . .67 AACC . . . . . . . . . . . . . . . . . . .61 AB Sciex . . . . . . . . . . . . . . . .43 Advanced Instruments . . . . . .47 Agappe . . . . . . . . . . . . . . . . .57 Airclean . . . . . . . . . . . . . . . . .50 Autobio . . . . . . . . . . . . . . . . . .11 BCLF 2013 . . . . . . . . . . . . . . .68 Biomerica . . . . . . . . . . . . . . . .55 Bioporto . . . . . . . . . . . . . . . . .30 Bioron . . . . . . . . . . . . . . . . . .26 Brand . . . . . . . . . . . . . . . . . . .63 Caretium . . . . . . . . . . . . . . . .62 Carolina . . . . . . . . . . . . . . . . .27 Cellavision . . . . . . . . . . . . . . .72 Ceragem . . . . . . . . . . . . . . . .52 Ceragem . . . . . . . . . . . . . . . .53 Cytognos . . . . . . . . . . . . . . . .42 DAAN Gene . . . . . . . . . . . . . .28 DAS . . . . . . . . . . . . . . . . . . . .12 DiagCor . . . . . . . . . . . . . . . . .44 DIALAB . . . . . . . . . . . . . . . . .41 Inq.No. 154 109 125 161 131 102 107 – 110 139 156 108 132 171 – 119 122 – – 158 120 114 – Advertiser Page DiaSource . . . . . . . . . . . . . . .54 Diagnostica Stago . . . . . . . . . .9 DIRUI . . . . . . . . . . . . . . . .24-25 DSI . . . . . . . . . . . . . . . . . . . . .62 EKF . . . . . . . . . . . . . . . . . . . .31 ELITech Group . . . . . . . . . . . . .2 Erba . . . . . . . . . . . . . . . . . . . . .7 EuroLabFocus 2014 . . . . . . .66 Globe Scientific . . . . . . . . . . .10 Greiner Bio-One . . . . . . . . . . .39 Hecht, Karl . . . . . . . . . . . . . . .56 Hitachi Aloka Medical . . . . . . .8 iCubio . . . . . . . . . . . . . . . . . . .32 IDS . . . . . . . . . . . . . . . . . . . . .71 IFCC Worldlab 2014 . . . . . . .64 Inova . . . . . . . . . . . . . . . . . . .19 Instrumentation Laboratory . .23 JIB 2013 . . . . . . . . . . . . . . . . .69 LabMedica.com . . . . . . . . . . . .6 Lee Co., The . . . . . . . . . . . . .58 Master Diagnostica . . . . . . . .20 Medix Biochemica . . . . . . . . .14 MIPTEC 2013 . . . . . . . . . . . .69 Inq.No. Advertiser Page 104 MP Bio . . . . . . . . . . . . . . . . . .22 151 Nuaire . . . . . . . . . . . . . . . . . .51 138 Operon . . . . . . . . . . . . . . . . . .48 117 Ortho Clinical Diagnostics 16-17 159 Phthisis . . . . . . . . . . . . . . . . .59 148 Pointe Scientific . . . . . . . . . . .48 128 Quantimetrix . . . . . . . . . . . . .28 105 Randox . . . . . . . . . . . . . . . . . .5 135 Rayto . . . . . . . . . . . . . . . . . . .44 103 Siemens Healthcare . . . . . . . .3 121 Siemens Healthcare . . . . . . .21 136 SNIBE . . . . . . . . . . . . . . . .36-37 115 Span . . . . . . . . . . . . . . . . . . .15 146 Tecom . . . . . . . . . . . . . . . . . .46 113 Tokyo Boeki . . . . . . . . . . . . . .13 165 URIT . . . . . . . . . . . . . . . . . . .65 129 VEDA.LAB . . . . . . . . . . . . . . .29 160 Vicotex . . . . . . . . . . . . . . . . . .60 118 Vircell . . . . . . . . . . . . . . . . . . .18 133 WAMA . . . . . . . . . . . . . . . . . .33 145 West Medica / Vision . . . . . . .45 Provided as a service to advertisers. Publisher cannot accept responsibility for any errors or omissions. Renew /Start your Free Subscription FREE PRODUCT Instant Online INFORMATION Product Information Every advertisement or product item in this issue contains a LinkXpress ® number as shown below: LINKXPRESS COM 1 2 3 LMI-07-13 V I Or, Circle LinkXpress Numbers of Interest on Reader Service Card and Fax Card to: ++1-954-893-0038 I T LINKXPRESS COM R E A D E R S E R V I C E ® P O R T A L 2 E ASY WAYS To Continue / Start Your FREE Subscription LMI-07-13 123 Identify LinkXpress ® codes of interest as you read magazine Click on LinkXpress.com to reach reader service portal Mark code(s) of interest on LinkXpress ® inquiry matrix S ONLINE 1 Visit LinkXpress.com to enter your subscription data and reader inquiries. B Y FA X 2 • Fill-out all required data on Reader Service Card including signature and date (incomplete or unsigned cards cannot be processed). • Circle inquiry numbers of interest to receive free information • Fax card without delay to: ++1-954-893-0038 ATTENTION: IF YOUR APPLICATION IS NOT RECEIVED AT LEAST ONCE EVERY 12 MONTHS YOUR FREE SUBSCRIPTION MAY BE AUTOMATICALLY DISCONTINUED LabMedica International June-July/2013 70 LINKXPRESS COM LMI-07-13 171 VISIT US AT: Booth: 2545 LINKXPRESS COM LMI-07-13 172