Patheon Inc.
Transcription
Patheon Inc.
New Leadership New Opportunities Annual Report 2007 Contents 2 Challenge & Progress 4 Operations & Markets 6 Leadership & Direction 8 Vision & Opportunity 2007 Highlights Patheon Today Message from the Board Message from the CEO 12 Management’s Discussion and Analysis 40 Five -Year Financial Summary 41 Five -Year Summary of Quarterly Results 42 Report of Management’s Accountability 42 Auditors’ Report 43 Audited Consolidated Financial Statements 48 Notes to Audited Consolidated Financial Statements 68 Board of Directors 68 Corporate Governance 70 Senior Management 71 Global Operations 73 Corporate Information Financial Highlights Years ended October 31 (in thousands of U.S. dollars except share information, 2007 2006 per-share amounts and percentages) $ $ financial results Revenues 677,074 674,659 % Change 0% EBITDA before repositioning expenses (% of revenues) Loss from continuing operations Net loss Loss per share Continuing operations Net loss per share 90,318 70,876 13.3% 10.5% (84,458) (288,719) (94,601) (288,150) 27% 71% 67% $ (0.91) $ (1.02) $ (3.11) $ (3.10) 71% 67% Balance sheets Total assets Working capital Interest-bearing debt Shareholders’ equity 829,617 826,183 80,572 (175,765) 363,689 349,617 197,185 250,731 0% 146% 4% - 21% EBITDA before repositioning expenses represents earnings from continuing operations before repositioning expenses, asset impairment charges, depreciation and amortization, foreign exchange losses reclassified from other comprehensive income, interest, refinancing expenses, write-off of deferred financing costs and income taxes. Interest-bearing debt includes the debt component of the convertible preferred shares. Corporate Profile Patheon is a global client-driven organization dedicated to delivering value-added services to the world’s pharmaceutical industry. Our one and only focus is to help our clients as they manage their product life cycles – from the development, testing and launch of new drug products through to the commercial manufacturing of approved medicines. Patheon currently manufactures more than 650 commercial products and has 197 new drug products in development on behalf of more than 250 companies in North America, Europe and Japan. Patheon will become the industry’s best provider of pharmaceutical development and manufacturing services. “We have built a strong foundation of talent and facilities, and we are uniquely positioned to serve the industry at an important time in its history.” Wesley P. Wheeler Chief Executive Officer Patheon Inc. 2007 Annual Report 1 2007 Highlights Challenge & Progress 2007 was a critical year for Patheon, beginning with a review of strategic alternatives and ongoing challenges at our Puerto Rico operations. By the end of the year, we had recapitalized the company, reaffirmed our business model, taken important decisions about our network and appointed a new CEO to lead Patheon forward. March 2007 Expansion of PDS at Milton Park, U.K. To meet growing demand, Swindon PDS begins expansion of its analytical development operations at Milton Park, to include Quick to Clinic™ early phase development. April 2007 Successful Recapitalization of the Company Patheon completes a major capital restructuring process with a $150 million investment in preferred shares by JLL Partners of New York and new credit arrangements for the North American and U.K. operations. Revenues Revenues Patheon supplies product to Merck & Co., Inc. for launch of newly approved JANUMET™ – one of the first projects included in a strategic supply agreement signed in 2006. (% of revenues) 750 658.9 674.7 677.1 600 432.9 54% 29% 600 Global Pharma Specialty Pharma 750 450 360.0 300 300 150 150 0 17% 0 2003 2004 2005 2006 Patheon Inc. 2007 Annual Report Biotechs 2007 Global Pharma 2 New Product Launch for Client Client Mix (in millions millions of ofU.S. U.S.dollars) dollars) (in 450 April 2007 Specialty Pharma Biotechs 2007 Highlights December 2007 November 2007 Appointment of Wes Wheeler as Patheon’s new CEO Launch of Clinical Packaging Services June 2007 Product Transfers Completed Patheon expands its successful formulation development and clinical trial manufacturing services to include labeling, packaging, storage and distribution of patient kit materials. In Italy and France, work was completed on an ambitious, two-year project involving the transfer of multiple products from two clients into Patheon’s facilities. These products generated $48.7 million in revenues in fiscal 2007. +27% Increase in EBITDA Before Repositioning Operating profitability improved significantly in 2007, reflecting successful efforts to improve productivity and efficiencies, and the benefits of foreign exchange gains. December 2007 Pharmaceutical industry executive Wes Wheeler is appointed CEO, to take the Company forward to its next phase of growth and profitability. Definitive Agreement to Sell NiagaraBurlington OTC Business As part of its strategy to focus on prescription pharmaceutical products, Patheon divests NiagaraBurlington over-the-counter commercial manufacturing operations to Pharmetics Inc. Revenues EBITDA Before Repositioning Expenses (in of U.S. U.S. dollars) dollars) (in millions millions of 94.0 100 70.9 75 50 90.3 45.3 49.8 25 0 2003 2004 2005 2006 2007 Patheon Inc. 2007 Annual Report 3 Patheon Today Operations & Markets Patheon has established a very competitive and geographically diverse network of sites, which enables us to attract great talent, offer a full range of services and build on our impressive list of clients worldwide. Commercial Manufacturing Commercial Manufacturing (% of total revenues in 2007) Patheon currently manufactures more than 650 commercial products on behalf of our clients. Our comprehensive services range from conventional dosage form manufacturing through to highly specialized sterile, high-potency and lyophilized manufacturing services. Pharmaceutical Development Pharmaceutical Development (% of total revenues in 2007) From start-up in 1995, PDS has grown to a business today of more than $100 million. The products being developed for clients, if approved, can be an important source of new business for Patheon’s commercial manufacturing operations. 4,650+ Employees Worldwide* 83% Revenues 17% (in millions of U.S. dollars) (1) Before Swindon, U.K. repositioning expenses of $4.4 million. (2) Before global repositioning expenses of $13.8 million. 12 sites Revenues (in millions of U.S. dollars) Located in U.S., Canada and Europe* (1) Before Swindon, U.K. repositioning expenses of $4.4 million. (2) Before global repositioning expenses of $13.8 million. *As at Dec. 31, 2007, excluding the Niagara-Burlington OTC sites 4 Patheon Inc. 2007 Annual Report Patheon Today Europe Swindon Operations (United Kingdom)* Canada Toronto Region Operations* Key facts: 3717 employees 3263,000 square feet 3High-potency, special compounds, solid, semi-solid and liquid dosage forms Toronto York Mills Operations Key facts: 3220 employees 3160,000 square feet 3Solid, semi-solid and liquid dosage forms Whitby Operations Key facts: 3393 employees 3199,000 square feet 3Solid, powder and liquid dosage forms Burlington Century Operations* Key facts: 3122 employees 345,000 square feet 3Central laboratory services 3Clinical trial materials packaging United States Cincinnati Operations* Key facts: 3539 employees 3495,700 square feet 3Solid, semi-solid and liquid dosage forms, controlled/sustained release, liquid-filled hard capsules Caguas (Puerto Rico)* Key facts: 3387 employees 3250,000 square feet 3Solid, semi-solid and liquid dosage forms Carolina (Puerto Rico) Key facts: 3173 employees 3230,000 square feet 3Oral cephalosporin solid dosage forms Key facts: 3639 employees 3366,300 square feet 3Sterile liquids, sterile powdered and lyophilized cephalosporins, semi-solid dosage forms Bourgoin-Jallieu Operations (France) Key facts: 3280 employees 3272,000 square feet 3Solid and liquid dosage forms Ferentino (Rome) Operations (Italy)* Key facts: 3333 employees 3144,000 square feet 3Sterile lyophilized and sterile liquid (parenteral) dosage forms Monza Operations (Italy) Key facts: 3484 employees 3344,000 square feet 3Sterile lyophilized, sterile liquids, solid and liquid dosage forms Manatí (Puerto Rico) Key facts: 3281 employees 3410,000 square feet 3Solid dosage forms * Includes PDS Centre of Excellence Patheon Inc. 2007 Annual Report 5 Message from the Board Leadership & Direction The recapitalization of Patheon is behind us, Puerto Rico is being addressed and we are divesting non-strategic operations. Patheon is moving in the right direction and we have appointed a new CEO – a proven pharmaceutical executive with the knowledge and experience to lead Patheon forward in a new era of growth. New directions in 2007 From the Board’s perspective, the immediate priority at the outset of 2007 was to establish a strong financial foundation for Patheon, enabling the Company to move forward with certainty and confidence to grow and enhance shareholder value. In March, Patheon announced an investment of US$150 million in convertible preferred shares by JLL Partners of New York, which was approved by shareholders in April. Concurrently, the balance of the North American and U.K. credit facilities were refinanced through new credit arrangements with J.P. Morgan Securities Inc. and GE Commercial Finance. This recapitalization achieved several goals. First, the Company gained the capital and financial stability essential to Patheon’s future success. Second, we achieved the benefits of working with JLL Partners -- experienced, long-term investors with considerable knowledge of the global healthcare industry who are making an ongoing contribution to the direction of Patheon through participation on the Board. With financial restructuring behind us, the Board moved decisively to support management’s priorities to position Patheon for sustainable and profitable growth. 6 Patheon Inc. 2007 Annual Report These included developing a plan to restore profitability in Puerto Rico, focusing the overall business on higher-margin services, and enhancing performance at all operations. In addition, as we saw operating performance improve, we looked to establish new long-term direction and leadership to realize our vision of global leadership and unlock the new opportunities that we see. Addressing the challenges in Puerto Rico In addition to capital restructuring, the most pressing challenges last year for Patheon related to continued losses at our three sites in Puerto Rico. We appointed new senior management in Puerto Rico earlier this year and, more recently, completed a comprehensive review and longer-term business plan for the Puerto Rico operations. As announced in December, we have decided to sell the Carolina site while streamlining the Caguas and Manati facilities. Our Puerto Rico operations are stabilizing and, with the sale of the Carolina facility, we expect improved results next year. Message from the Board Focusing our business In April 2007, we announced a major initiative to focus Patheon’s capital and resources on the development and manufacture of prescription pharmaceutical products, which represent higher-margin revenues, while also improving profitability. We divested our Niagara-Burlington Operations, which manufacture over-the-counter pharmaceutical products, in a transaction that was completed on January 31, 2008. To further improve capacity utilization, we are transferring production from our York Mills site in Toronto to our site in Whitby, Ontario, and have entered into an agreement to sell the York Mills facility. Improving operating performance During fiscal 2007, our other operations in Canada, Europe and Cincinnati continued to perform well, achieving an EBITDA before repositioning margin of more than 18% -a considerable improvement over the performance of the past few years. New leadership While working with management to address the challenges and improve profitability, the Board also took the longer-term view. We determined that a new start for Patheon and a positive new direction would be best served by new leadership. The Board launched a search for a permanent CEO, identifying and appointing a leading pharmaceutical executive to move Patheon forward. 258 Clients worldwide in three main sectors In Wes Wheeler, we have found a leader with in-depth knowledge of the pharma industry and a breadth of experience in manufacturing, research and development and marketing. We also are very pleased that there has been a positive and seamless transition of leadership from Riccardo Trecroce, who guided Patheon so well through the recapitalization and restructuring process in a watershed year. Confidence in the future Patheon has emerged from the uncertainty and challenges of fiscal 2007 as a focused and strong contender with a clear vision. We believe the course we have established in Puerto Rico will address our major challenges and enable these operations to make a positive contribution to our results. Patheon is well equipped, with an engaged and experienced Board, strong new leadership, and a host of opportunities. We have every confidence in the future of Patheon. (signed) Peter A.W. Green Chairman, Board of Directors 650 Products manufactured by commercial operations 197 Number of new products being developed for clients Patheon Inc. 2007 Annual Report 7 Wes Wheeler, Chief Executive Officer Message from the CEO Vision & Opportunity Patheon’s vision is clear – we aim to become the best contract manufacturing and development services provider to the pharmaceutical industry. We have the facilities, the people and the market opportunity to realize this vision. Sharing the vision I am privileged to join Patheon at this critical point, and excited to have the opportunity to write the next chapter in this Company’s history. Patheon has matured as a global service provider at an important time for the industry. We have excellent production and laboratory facilities in five countries, offering a wide range of manufacturing and development services. As we have grown, we have attracted excellent talent and technical expertise, while gaining valuable experience along the way. Being able to work with the leading pharmaceutical and biotech companies affords us a unique opportunity to stay current with trends and develop best practices. In a sense, we are a melting pot of the industry, and we are using our broad base of talent to foster an environment of continuous improvement. I believe we have the foundation, talent and will to realize our vision of being the best service provider in the industry. However, we also have had our challenges. Our acquisition of MOVA in Puerto Rico was strategic but untimely. The financial losses stemming from our business in Puerto Rico forced us to pull back and delay pursuit of our goals for several quarters. During this difficult period we were able to successfully recapitalize the Company with the leadership of our Board and JLL Partners. This work is now behind us and we are pleased to have the financial stability needed to move forward confidently into the future. Confidence as we move forward My confidence in the future of this Company is based on three fundamental beliefs. First, pharmaceutical companies are increasingly adopting outsourcing as a strategic approach. Some of the leading pharmaceutical companies – our clients – are now focused on restructuring their networks and reassessing their cost structures. Plants are being sold or closed and products are being rationalized. We also are seeing an increased tendency on the part of our clients to form strategic outsourcing units and master service agreements. Patheon is well positioned to serve in this environment of change. Moreover, as we consolidate this volume into our own capacity, we are more able to offer cost-effective options for our clients. Patheon Inc. 2007 Annual Report 9 Message from the CEO Second, there is an emergence of specialty pharmaceutical companies and biotech companies which require both development and manufacturing services but are not necessarily investing in their own facilities. These emerging companies are requesting a broad array of services from us and we continue to expand our service offerings to meet their needs. Our Pharmaceutical Development Services business has evolved to become our fastest-growing business sector and has grown our client base tremendously. We hope to convert this development business into longer-term commercial business as products are approved. Third, I believe that there will always be a need for outsourcing companies that focus on customer service. Many companies talk about being focused on customer needs, but few actually deliver on this promise. Although this is already a key focus at Patheon, I believe we can do better. We will set the bar high for ourselves when it comes to professional customer service and learn from our shortcomings. We will benchmark ourselves against the best. We will launch our first ever ‘Technical Excellence’ program, based on the principles of ‘lean’ and ‘six sigma’, in order to foster an environment of continuous improvement. We will earn the loyalty of our clients by delivering on every one of their requirements. We are standing at the crossroads of an important time in our industry, when pharma companies are looking for solutions and cost efficiency has become more than just a watchword. And Patheon will be ready to deliver. Near-term goals and priorities In moving Patheon forward, we have some very specific short-term priorities which will be critical as we begin under new leadership: 1. Stabilize cashflow and restore profitability in Puerto Rico. We are proceeding with the sale of the Carolina facility and are highly focused on restoring the profitability of the remaining two sites, in Caguas and Manati. The first step is to work with our new management team in Puerto Rico to stabilize the business, which should be achieved within this fiscal year. Our next step is to ensure that these sites make a positive net contribution to our global network, growth strategies and profitability. Puerto Rico is a formidable manufacturing centre for the industry and we are committed to building a business there. We will invest and focus our sales teams accordingly. 2. Focus on our clients. We are a service business. To be the leading contract manufacturer and service provider, we must build on our well-established relationships with the top companies in the industry. We will create customer-facing teams, conduct frequent surveys and focus on maintaining strong, trusting relationships at all levels of our business. 219 Client and regulatory audits conducted in fiscal 2007 10 Patheon Inc. 2007 Annual Report 2,120 University degrees held by Patheon employees Message from the CEO Pharmaceutical Development Revenues 29% (in millions of U.S. dollars) 116.5 120 89.7 98.0 90 64.2 Compound Annual Growth Rate 60 PDS revenues have grown at a compound annual growth rate of 29% since 2003. 41.8 30 0 2003 Commercial Manufacturing Revenues 569.2 450 576.7 560.6 2006 2007 600 450 368.7 318.2 300 300 Market Opportunity The size 150 of the market for outsourced dosage form manufacturing is estimated to be approximately $10 billion. 150 0 0 2003 2004 2005 2006 2007 3. Build a high-performance executive team and embrace our employees. Our business is only as good as its people, and our success relies on their strength, energy and creativity. We have more than 4,650 employees, including 500 pharmaceutical development scientists, 76 of whom hold PhDs. They come from all over the industry, from dozens of countries. They bring a diversity of knowledge, impressive qualifications, their own track records of success and a belief in our service model. We will continue to train, nurture and motivate our people in each of our sites as a way to develop a competitive advantage. As we continue to grow, new talent will emerge and greater diversity of talent and innovation will become part of our business. 4. Diversify and improve our service offering. I believe that both large and small players in the global pharma industry are looking for new technology, new ideas for lifecycle management, new formulations, broader service offerings, more ‘one-stop shopping’ and new ways to supplement their own internal functions. Patheon has done well to expand its service offerings in recent years, and we will continue to search for new technology to assist our clients. 2005 $10 billion (in millions of U.S. dollars) 600 2004 Great opportunities lie ahead For me personally, this is a great opportunity. At Patheon, we have within our grasp the tools to become the leading service provider to the industry. We are re-capitalized and financially stable. We are supported by an enthusiastic Board of Directors. We have very talented people, excellent facilities and a passion for excellence. I am very proud to be part of this Company and privileged to be leading the way forward. Patheon is entering a new phase of its history, at a time when our clients are demanding more of their service providers. We will be ready and we will not let them down. Thank you for your investment and support. (signed) Wesley P. Wheeler Chief Executive Officer Patheon Inc. 2007 Annual Report 11 Management’s Discussion and Analysis 13 Note to the Reader 13 Cautionary Note Regarding Forward-Looking Statements 13 Use of Non-GAAP Financial Measures 14 Company Profile and Strategy 14 15 15 16 17 18 19 21 Performance Analysis About Patheon Vision and Strategy Overview of Pharmaceutical Industry Outsourcing Competitors Recent Developments Selected Annual Financial Information Key Performance Drivers 21 28 28 28 29 33 34 Risk Management and Accounting Policies Results of Operations Selected Quarterly Financial Information Seasonal Variability of Results Outlook for 2008 Liquidity and Capital Resources Additional Information 34 Risk Management 36 Critical Accounting Policies and Estimates 39 Effectiveness of Disclosure Controls and Internal Controls This management’s discussion and analysis of financial condition and results of operations (“MD&A”) should be read in conjunction with the Company’s consolidated financial statements and related notes and Auditors’ Report. The consolidated financial statements have been prepared in accordance with Canadian generally accepted accounting principles (“GAAP”). All amounts are in U.S. dollars unless otherwise indicated. This information is current to January 22, 2008. Other information about the Company, including the Annual Information Form and other disclosure documents, reports, statements or other information that is filed with Canadian securities regulatory authorities can be accessed through SEDAR at www.sedar.com. 12 Patheon Inc. 2007 Annual Report Management’s Discussion and Analysis Note to the Reader Cautionary Note Regarding Forward-Looking Statements This MD&A contains forward-looking statements which reflect management’s expectations regarding the Company’s future growth, results of operations, performance (both operational and financial) and business prospects and opportunities. Wherever possible, words such as “plans”, “expects” or “does not expect”, “forecasts”, “anticipates” or “does not anticipate”, “believes”, “intends” and similar expressions or statements that certain actions, events or results “may”, “could”, “would”, “might” or “will” be taken, occur or be achieved have been used to identify these forward-looking statements. Although the forward-looking statements contained in this MD&A reflect management’s current assumptions based upon information currently available to management and based upon what management believes to be reasonable assumptions, the Company cannot be certain that actual results will be consistent with these forward-looking statements. Forward-looking statements necessarily involve significant known and unknown risks, assumptions and uncertainties that may cause the Company’s actual results, performance, prospects and opportunities in future periods to differ materially from those expressed or implied by such forward-looking statements. These risks and uncertainties include, among other things: the market demand for client products; credit and client concentration; the ability to identify and secure new contracts; regulatory matters, including compliance with pharmaceutical regulations; international operations risks; exposure to foreign currency risks; competition; product liability claims; intellectual property; environmental, health and safety risks; substantial financial leverage; interest rates; conditions of MOVA’s tax exemptions; divestiture of the Carolina site; significant shareholders; risks associated with information systems; and supply arrangements. or intended. There can be no assurance that forward-looking statements will prove to be accurate, as actual results and future events could differ materially from those anticipated in such statements. Accordingly, readers should not place undue reliance on forwardlooking statements. These forward-looking statements are made as of the date of this MD&A and, except as required by law, the Company assumes no obligation to update or revise them to reflect new events or circumstances. Use of Non-Gaap Financial Measures Except as otherwise indicated, references in this MD&A to “EBITDA before repositioning expenses” are to earnings from continuing operations before repositioning expenses, asset impairment charges, depreciation and amortization, foreign exchange losses reclassified from other comprehensive income, interest, refinancing expenses, write-off of deferred financing costs and income taxes. “EBITDA margin before repositioning expenses” is EBITDA before repositioning expenses as a percentage of revenues. EBITDA before repositioning expenses and EBITDA margin before repositioning expenses are measures of earnings and earnings margin not recognized by GAAP. Since each of these measures is a non-GAAP measure that does not have a standardized meaning, it may not be comparable to similar measures presented by other issuers. Readers are cautioned that these non-GAAP measures should not be construed as alternatives to net earnings (loss) determined in accordance with GAAP as indicators of performance. The Company has included these measures because it believes that this information is used by certain investors to assess financial performance of the Company, in particular the operating earnings before non-cash charges and large non-recurring costs. Although the Company has attempted to identify important risks and factors that could cause actual actions, events or results to differ materially from those described in forward-looking statements, there may be other factors and risks that cause actions, events or results not to be as anticipated, estimated Patheon Inc. 2007 Annual Report 13 Management’s Discussion and Analysis Company Profile and Strategy About Patheon Patheon Inc. (“Patheon” or the “Company”) is a public company, amalgamated under the Canada Business Corporations Act, which trades under the symbol PTI on the Toronto Stock Exchange. The Company, organized and managed as a single business segment, is an independent provider of commercial manufacturing and pharmaceutical development services (“PDS”) of prescription (“Rx”) and over-the-counter (“OTC”) drugs to the international pharmaceutical industry. Patheon is focused exclusively on providing commercial manufacturing and pharmaceutical development services to pharmaceutical companies, biotechnology companies and specialty pharmaceutical companies located primarily in North America, Europe and Japan. Patheon serves its international clientele from its operating facilities in North America (including Puerto Rico) and Europe. Commercial Manufacturing and packaging process, from sourcing excipient raw materials and packaging components to delivering the finished product in consumer-ready form to the client. Typically, Patheon’s clients supply the active pharmaceutical ingredients used in the production process. In 2007, Patheon’s facilities were audited by 201 separate client audit teams, representing both prospective and existing clients. Audits by prospective clients permit them to gain confidence that Patheon’s operations are conducted in accordance with applicable regulatory requirements. Audits by existing clients permit these clients to reaffirm that Patheon’s operations, as they relate to their products, are conducted in accordance with these requirements. These audits contribute to Patheon’s ongoing improvement of manufacturing and development practices. In addition, there were 18 regulatory audits conducted at the Company’s sites in North America and Europe. Pharmaceutical Development Patheon provides manufacturing services in accordance with client specifications. Depending on the particular client, Patheon may be responsible for some or all aspects of the manufacturing The pharmaceutical development services provided by Patheon include most of the dosage form development services typically required by companies conducting clinical trials and preparing for full-scale commercial production of a new drug. In providing its pharmaceutical development services, Patheon is able to: (i) develop an appropriate dosage form; (ii) develop analytical methods; (iii) manufacture the proposed new drug product to client specifications during the regulatory drug approval process; (iv) manufacture pilot batches of proposed new drug products for the regulatory drug approval process; and (v) provide scale-up and technology transfer services designed to validate that a drug can be manufactured commercially. Client Base Revenues by Geographic Region Patheon commercially manufactures Rx and OTC products in solid, semi-solid, sterile and liquid dosage forms. Conventional dosage forms include compressed tablets, hard-shell capsules, powders, ointments, creams, gels, syrups, suspensions, solutions and suppositories. Sterile dosage forms include liquids and powders filled in ampoules, vials, bottles or pre-filled syringes. Sterile lyophilized products are also manufactured in both vials and ampoules. (number of clients) (based on clients’ billing addresses) 254 275 258 225 220 165 192 150 275 52% 44% 220 United States Europe 165 110 2% 110 Canada 55 55 0 2004 2005 2006 Other 2007 United States 14 2% 0 2003 Patheon Inc. 2007 Annual Report Europe Canada Other Management’s Discussion and Analysis Patheon offers pharmaceutical development services at five facilities in North America and Europe. In addition to possessing pharmaceutical development capabilities for a broad range of dosage forms, each of Patheon’s PDS units provides a different specialized pharmaceutical development capability (high potency, sterile, lyophilization, controlled release and liquid filled hard capsules). At October 31, 2007, the company was working on a total of 197 of its clients’ projects in the development pipeline, including nine drug candidates at the New Drug Application (“NDA”) stage. Since the beginning of fiscal 2001, 19 new pharmaceutical products developed by Patheon’s PDS units have progressed to commercial manufacturing, including two in fiscal 2007. A third new product developed by PDS received regulatory approval in the third quarter of 2007 and, based on advice from the Company’s client, is expected to be commercialized in 2008. Vision and Strategy Patheon’s vision is to become the world leader in providing pharmaceutical development and manufacturing services. Patheon strives to be the preferred manufacturing and pharmaceutical development services partner to the global pharmaceutical industry. Patheon’s strategy is focused on providing “best-in-class” manufacturing and development services, effectively balancing high product quality and reliability of supply with cost. Patheon expects, based on its internal analysis and experience, that stronger manufacturing and development relationships will continue to emerge between pharmaceutical companies and service companies as the pharmaceutical industry continues to re-evaluate its internal manufacturing capabilities and streamlines its external service-provider network. The Company is using its position as a comprehensive provider of commercial manufacturing services to establish and maintain long-term and strategic relationships with clients on a global basis. Prior to 2006, a key aspect of Patheon’s strategy was a plan to expand capacity, expertise and capabilities through acquisitions, positioning the Company to be the preferred manufacturing services partner to the pharmaceutical industry. This led to the acquisition of several pharmaceutical manufacturing facilities and the entry into long-term manufacturing relationships in conjunction with certain of these acquisitions. More recently, Patheon has focused on growing its Rx commercial manufacturing and PDS business internally by broadening its service offering to include differentiated and specialized technologies and capabilities and expanding the level of business from existing clients, attracting new clients, and entering into commercial manufacturing agreements for newly approved products for which the Company has provided development services. In implementing its strategy, the Company will continue to seek to maximize capacity utilization and improve efficiency, broaden its services to include other manufacturing capabilities, and seek to increase the percentage of more profitable Rx products manufactured at its facilities. In addition, the Company will seek to expand its PDS capabilities in North America and Europe to better serve the needs of the global pharmaceutical industry. Pharmaceutical development services are an important source of new business for commercial manufacturing of prescription pharmaceuticals. Overview of Pharmaceutical Industry Outsourcing The global pharmaceutical industry comprises global, regional and national pharmaceutical manufacturers and distributors, biotechnology companies and specialty pharmaceutical companies. The focus and operational structures of many global pharmaceutical companies have undergone significant changes in the past few years. Many global pharmaceutical companies are relying on the services of contract product development and commercial manufacturing companies to help them meet growing demand and bring new drugs to market more quickly. As a result, certain competencies such as dosage form manufacturing and dosage form development are increasingly being restructured or outsourced to service providers such as Patheon. Over the last approximately eighteen months, several global pharmaceutical companies have publicly announced intentions to restructure their site networks to increase operating efficiencies and to outsource more of their production. In addition, more products are being developed by biotechnology companies, focused on new drug discoveries. Many of these companies have focused their financial resources on the development and marketing of their products, rather than investing in their own manufacturing capacity. As a result, the demand for third-party dosage form manufacturing services continues to increase as these smaller companies grow in number and relative representation within the industry. Finally, specialty pharmaceutical companies (pharmaceutical companies focused on in-licensing or acquiring products, rather than new drug discovery) typically operate in a particular niche segment, such as drug delivery systems or product portfolios focused on specific therapeutic categories. These companies are increasingly in-licensing or developing their own branded products for which they may not have the necessary manufacturing capacity or capabilities, and therefore, are turning to third-party service providers to provide manufacturing services. Patheon Inc. 2007 Annual Report 15 Management’s Discussion and Analysis Company Profile and Strategy (continued) Patheon’s target markets include the global market for the manufacture of finished dosage forms and for dosage form research and development. The size of the market for outsourced dosage form manufacturing, based on publicly available industry sources, is estimated to be approximately $10 billion – the majority of which comprises solid and semi-solid dosage forms, such as tablets, capsules and creams, a third of which consists of outsourced manufacturing of injectable products, with the balance comprising specialty dosage forms. In 2006, the top 400 pharmaceutical and biotechnology companies spent an estimated $100 billion worldwide on research and development. Patheon’s management estimates that this amount includes approximately $3 billion spent on dosage form development, of which approximately $1 billion is outsourced. The number of new clinical trials started by pharmaceutical companies continues to increase. A total of 707 commercial Investigational New Drug Applications were filed with the FDA’s Center for Drug Evaluation and Research in 2006, up from 608 in 2005. Pharmaceutical and biotechnology companies are relying increasingly on contract drug development suppliers to help move high-potential chemical entities through the various stages of evaluation more quickly. Demand for outsourced pharmaceutical development and commercial manufacturing services is expected to continue to grow. In addition to pressure on pharmaceutical and biotechnology companies to reduce costs, Patheon’s management believes that growth of pharmaceutical industry outsourcing will be driven by the following factors: 3 growth of the global pharmaceutical industry. According to leading market research firm IMS Health, global pharmaceutical industry revenues have grown from $354 billion in 2000 to approximately $643 billion in 2006; 3 global research and development expenditures are increasing; 3 the number of product candidates in development continues to expand; 3 consolidation of the pharmaceutical industry, and supply chain restructuring, are providing new opportunities as companies seek to reduce excess capacity in their manufacturing networks; 3 increased demand for specialized manufacturing capabilities in key technical niches (for example, lyophilization); and 3 increased demand for back-up sources of supply. 16 Patheon Inc. 2007 Annual Report Competitors Commercial Manufacturing In North America and Europe, Patheon’s competition includes: 3 companies, both private and public, that are not focused exclusively on contract manufacturing, but provide this service as part of a range of services to the pharmaceutical industry; 3 companies that focus on contract manufacturing, but offer services in a limited number of dosage forms or serve only their local or national markets; 3 large pharmaceutical companies that offer third-party manufacturing services to fill excess capacity; and 3 in addition, in Europe there are a large number of privately owned, dedicated outsourcing companies that serve only their local or national markets. Pharmaceutical Development The pharmaceutical development services market is composed of a range of participants: 3 a large number of laboratories, which offer only a limited range of development services, generally at a small scale; 3 providers focused on specific technologies and/or dosage forms; and 3 a few fully integrated companies that can provide the full complement of services necessary to develop, scale-up and manufacture a wide range of dosage forms. In recent years a number of companies in Asia, particularly India, have been entering the pharmaceutical contract manufacturing and PDS sectors and have been proceeding with obtaining FDA approval for some of their plants as well as acquiring additional plants in Europe and North America. Management’s Discussion and Analysis Recent Developments Financing Arrangements and Strategic Alternatives On September 11, 2006, the Company announced that its Board of Directors had established a special committee to evaluate a range of strategic and financial alternatives for the Company. As a result of this review, on April 27, 2007 JLL Partners, through its investment vehicle, JLL Patheon Holdings, LLC (“JLL Partners”) purchased $150 million of convertible preferred shares and special voting preferred shares of the Company through a private placement. On April 27, 2007 the Company also completed new credit facilities in the aggregate amount of $225 million, comprising a seven-year $150 million term loan and a five-year $75 million revolving facility. The net proceeds from the JLL Partners investment and the seven-year term loan were used to repay the Company’s obligations under its existing North American and U.K. credit facilities. Restructuring the Canadian Site Network On April 17, 2007 the Company announced that as part of its strategy to focus on developing and manufacturing Rx pharmaceutical products and to improve the Company’s profitability, it plans to restructure its current network of six pharmaceutical manufacturing facilities in Canada. In connection with this initiative, on December 6, 2007 the Company announced that it had entered into a definitive agreement to sell its Niagara-Burlington OTC commercial manufacturing business to Pharmetics Inc. Under the terms of the agreement Pharmetics will acquire the assets, including equipment, facilities and land at the Company’s facilities in Fort Erie and Burlington (Gateway Drive). Pharmetics will provide employment to the entire active workforce of about 250 commercial manufacturing employees at the two sites and, subject to assignment of third party contracts, will continue to manufacture and supply all of the products currently manufactured at these sites. The Company is retaining its leased Burlington Century facility where its central quality control laboratory is based. The transaction is expected to be completed on or about January 31, 2008, subject to closing conditions including regulatory approvals, the assignment of client and other contracts and the completion of financing arrangements by the purchaser. The purchase price for the business is CAD$5.75 million plus working capital, subject to adjustments. The Company also plans to close its York Mills, Toronto facility and transfer substantially all commercial production and development services to its site in Whitby and sell the land and buildings. A smaller portion of the York Mills operations will be transferred to the Toronto Region Operations and Cincinnati facilities. Based on current internal projections, the process of transferring production to other facilities is expected to be completed by the end of the first half of fiscal 2009. On December 31, 2007, the Company entered into a binding agreement of purchase and sale for the sale of the York Mills property for a purchase price of CAD$12.5 million, including a non-refundable deposit of CAD$1.0 million. Subject to obtaining the required closing documentation, the sale is scheduled to close by March 31, 2008, with Patheon leasing back the facility for up to two years in order to facilitate the decommissioning process. Based on current deployment plans, the Company expects that most, if not all, of the employees at the York Mills facility will have an opportunity to transfer to the Whitby facility or to another site in the Patheon network. The assets and the related liabilities of the Niagara-Burlington Operations, along with the York Mills real estate, have been classified as held for sale on the balance sheet in the consolidated financial statements. Restructuring the Puerto Rico Operations During fiscal 2007, the Company conducted a comprehensive review of its Puerto Rican operations, with a focus on restructuring the operations, eliminating operating losses and developing a long-term plan for the business. On December 14, 2007, the Company announced that, as a result of this review, it had decided to retain and continue to streamline its facilities in Caguas and Manati and to divest its facility in Carolina, Puerto Rico. The decision follows the genericization of Omnicef® in May 2007 and the resulting significant drop in revenues at the facility. (1) The Carolina site is a 230,000-square-foot facility, with approximately 200 employees, that specializes in the manufacture of oral cephalosporin solid dosage forms, including tablets, capsules and powders for suspension. It currently manufactures four products on behalf of six clients. The Company has concluded that Carolina, a high-quality site with specialized capabilities and expertise, would be of greater strategic value to another company with a focus on manufacturing oral cephalosporins. The divestiture will allow the Company to focus on improving operating performance and growing the business at the Caguas and Manati facilities. Based on current divestiture plans and subject to future negotiation, the Company expects to provide that any purchaser will assume responsibility for the staff at the Carolina facility and contracts with third parties, subject to their approval. Patheon has retained an advisor to manage the sale of the Carolina site. (1) Omnicef is a registered trademark of Astellas Pharma, Inc. Patheon Inc. 2007 Annual Report 17 Management’s Discussion and Analysis Company Profile and Strategy (continued) Normal Course Issuer Bid In October 2007, the Company commenced a normal course issuer bid, pursuant to which it may acquire from time to time through the facilities of the Toronto Stock Exchange up to 4.6 million restricted voting shares, representing approximately 5% of the restricted voting shares outstanding at the time of the bid’s commencement. The Company commenced the normal course issuer bid because the Board of Directors and management believed that from time to time the market price of the restricted voting shares could be such that their repurchase might be an attractive and appropriate use of corporate funds. As at October 31, 2007, the Company had repurchased and cancelled 2,334,300 restricted voting shares at a cost of $8.8 million. The normal course issuer bid will expire in October 2008. Selected Annual Financial Information The following is selected financial information for the three most recent fiscal years: Years ended October 31 (in thousands of U.S. dollars, except per share amounts) 2007 $ 2006 $ 2005 $ Revenues Earnings (loss) from continuing operations before repositioning expenses and asset impairment charge Basic and diluted earnings (loss) per share from continuing operations before repositioning expenses and asset impairment charge Net earnings (loss) Basic and diluted earnings (loss) per share Total assets Total long-term liabilities Cash dividends 677,074 674,659 658,856 (21,791) (25,185) 19,693 ($0.24) (94,601) ($1.02) 829,617 440,727 – ($0.28) (288,150) ($3.10) 826,183 144,246 – $0.23 21,621 $0.25 1,051,568 351,283 – A reconciliation of net earnings (loss) and earnings (loss) per share from continuing operations, before repositioning expenses and asset impairment charge, with net earnings (loss) and earnings (loss) per share from continuing operations is as follows: Years ended October 31 (in thousands of U.S. dollars, except per share amounts) 18 2007 (Loss) $ EPS 2006 (Loss) $ EPS 2005 Earnings $ EPS Net earnings (loss) from continuing operations Repositioning expenses Income taxes related to repositioning expenses Asset impairment charge Income taxes related to asset impairment charge (84,458) 15,800 (932) 48,580 (781) ($0.91) $0.17 ($0.01) $0.52 ($0.01) (288,719) 12,998 (1,564) 254,661 (2,561) ($3.11) $0.14 ($0.02) $2.74 ($0.03) 19,693 – – – – $0.23 – – – – Net earnings (loss) from continuing operations before repositioning expenses and asset impairment charge (21,791) ($0.24) (25,185) ($0.28) 19,693 $0.23 Patheon Inc. 2007 Annual Report Management’s Discussion and Analysis Changes in revenues, net earnings (loss) before repositioning expenses and asset impairment charge, net earnings (loss) and related basic and diluted earnings (loss) per share between 2007 and 2006 are explained in the “Results of Operations” section in this MD&A. The decline in earnings from continuing operations before repositioning expenses and asset impairment charge in 2006 relative to 2005 principally reflected a reduction in the profitability of the Caguas and Carolina operations in Puerto Rico. In Caguas, profitability was impacted by declines in base business volumes and the suspension of production during the third quarter of 2006 of a major product due to concerns over product shelf life. In Carolina, profitability was impacted during the first half of 2006 by an FDA warning letter, which resulted in additional costs and operating inefficiencies. The increase in long-term liabilities in 2007 compared with 2006 is due to the completion of a $150 million long-term senior secured debt facility and the issue of $150 million of convertible preferred shares to JLL Partners. The proceeds from these financing activities were used to repay existing debt facilities in North America and the U.K. In 2006, these debt facilities were classified within current liabilities. The reduction in long-term liabilities in 2006 compared with 2005 was due to the reclassification of long-term debt to short-term indebtedness as a result of the likelihood of potential future covenant defaults under the Company’s prior North American credit facilities. The reduction in total assets in 2006 compared with 2005 was principally due to an asset impairment charge which wrote down the carrying value of long-lived depreciable assets and goodwill in the Puerto Rico operations, as explained in note 4 to the Company’s 2007 audited consolidated financial statements. Key Performance Drivers The Company has identified several performance drivers that are key to its operating performance: (i) generating higher-quality revenues by increasing the percentage of more profitable Rx and PDS business at its facilities; (ii) improving capacity utilization and operating efficiencies at its sites; and (iii) managing the impact of changes in the foreign exchange trading relationship between the Canadian and U.S. dollar. (i) Generating higher-quality revenues Patheon continues to pursue its strategy of focusing resources and capital on increasing the percentage of revenues generated from providing higher-margin Rx manufacturing and pharmaceutical development services. As part of this strategy, on December 6, 2007 the Company announced that it had entered into a definitive agreement to sell its Niagara-Burlington operations that are focused on the commercial manufacturing of OTC products. In 2007, prescription manufacturing services and pharmaceutical development services comprised 93% of revenues from continuing operations, excluding the NiagaraBurlington OTC operations, compared with 90% in 2006. Patheon’s ability to provide its clients with integrated drug development, scale-up and commercial manufacturing services across a broad range of capabilities is a unique offering and a key competitive advantage. It reduces the need for its clients to incur costly and time-consuming transfers between facilities of products in development, thereby providing strategic benefits to clients who are seeking to bring new drugs to market more quickly. From the Company’s perspective, pharmaceutical development services are provided on a fee-for-service basis at relatively attractive margins, and the products being developed, if approved, can be an important source of new business for the Company’s commercial manufacturing operations. (ii) Improving capacity utilization and operating efficiency The Company’s operating sites’ cost structure is largely fixed in the short term. Therefore, unanticipated fluctuations in manufacturing activity can have a significant impact on profit margins. The Company continues to focus on improving capacity utilization at all of its sites by entering into new commercial manufacturing agreements with new and existing clients. The Company also continues to evaluate how to best utilize the amount of available capacity in its network. On April 17, 2007, the Company announced that it intends to close its York Mills site in Toronto and transfer substantially all commercial production and development services at the facility to its Whitby, Mississauga and Cincinnati sites. This closure is expected to improve profitability by reducing excess manufacturing capacity and reducing ongoing anticipated capital expenditure requirements. The transfers are expected to be completed by the end of the first half of fiscal 2009. On December 14, 2007, the Company also announced that it intended to divest its facility in Carolina, Puerto Rico that manufactures oral cephalosporin solid dosage form products. This decision was made following a significant reduction in capacity utilization at the facility during the fourth quarter of 2007, as a result of the emergence of generic competition for Omnicef®, the single largest volume product manufactured at the site. Patheon Inc. 2007 Annual Report 19 Management’s Discussion and Analysis Company Profile and Strategy (continued) In 2007, the Company continued with its performance enhancement program that was initiated in 2006, with an aim of improving operating results. The program consists of three main initiatives: 3 a global procurement program; 3 a workforce reduction program; and 3 a manufacturing efficiency review by external advisors. The objective of the global procurement program is to leverage the Company’s global purchasing power to reduce costs, reducing the number of vendors and reducing the Company’s investment in working capital through better payment terms and vendor managed inventory. The Company successfully negotiated contracts which resulted in cost savings in fiscal 2007 from lower pricing and volume rebates on inventory items, such as excipients and packaging components, as well as non-inventory consumables and services, including laboratory supplies and waste management services. Patheon continued to reduce the size of its global workforce during 2007 by approximately 520 positions, or 9%, to approximately 5,100 full-time equivalent positions as at October 31, 2007, (approximately 4,900 at December 31, 2007). These reductions were undertaken principally in the Caguas and Carolina operations in Puerto Rico to address production volume declines. During 2006, Patheon undertook a manufacturing efficiency review process in respect of its Whitby operations and implemented a number of operational improvements that led to significant gains in production throughput and labour efficiency. In 2007, the Company extended its manufacturing efficiency review process to other sites in the Company’s network, including the Toronto Region Operations, Cincinnati and Swindon sites and PDS in Canada. In 2007, follow-up audits were conducted in Whitby, Toronto Region Operations, and Cincinnati which verified improvements in production throughput and labour efficiency. A similar audit is planned for Swindon and PDS Canada in 2008. As well, by late 2007, planning had begun to identify future improvement initiatives in 2008. 20 Patheon Inc. 2007 Annual Report (iii) Managing the impact of foreign exchange fluctuations Because the Company’s client service contracts in North America are primarily in U.S. dollars, the profitability of the Company’s Canadian operations can be impacted by significant changes in the foreign exchange trading relationship between the Canadian and U.S. dollar. Approximately 70% of revenues and approximately 20% of operating expenses of the Canadian operations are transacted in U.S. dollars. The Company has to convert a portion of its net U.S. dollar inflow to Canadian dollars to finance the Canadian dollar expenses of its Canadian sites. A one-cent change in the U.S./Canadian dollar exchange rate is estimated to impact pre tax earnings by approximately $0.9 million on an annual basis, before the impact of the hedging program. As discussed in the “Risk Management” section of this MD&A, the Company employs a hedging program to mitigate the impact of this risk. At October 31, 2007, the balance sheet of the Company’s Canadian operations included $229.5 million of U.S. dollar denominated debt (including the debt component of the Company’s convertible preferred shares). The Canadian operations are required to revalue the Canadian dollar equivalent of the U.S. dollar denominated debt at each period end. At October 31, 2007, $141.6 million of this debt was designated as an effective hedge against the Company’s investments in subsidiaries in the U.S.A. and Puerto Rico. All foreign exchange gains and losses associated with the debt that is considered to be an effective hedge are recorded in other comprehensive income. Foreign exchange gains and losses from the remaining debt are recorded in earnings. In October 2007, the Company entered into a forward foreign exchange contract to reduce the related impact on earnings. In 2007, the Company recorded foreign exchange gains, net of hedging activities, in the loss from continuing operations, in connection with this exposure of $12.3 million. Management’s Discussion and Analysis Performance Analysis Results of Operations The results of operations for Niagara-Burlington have been segregated and presented separately as discontinued operations. All comparative amounts have been reclassified to conform to the current period presentation. Results of Consolidated Operations Years ended October 31 (in thousands of U.S. dollars, except percentages and per-share amounts) Revenues Operating expenses Foreign exchange gain on debt Earnings before the following: 2006 $ % Change 677,074 599,087 (12,331) 674,659 603,783 – 0% –1% 90,318 70,876 27% (as a % of revenues) 13.3% 10.5% Repositioning expenses Asset impairment charge Depreciation and amortization Amortization of intangible assets Foreign exchange loss on foreign operations Interest Refinancing expenses Amortization of deferred financing costs Write-off of deferred financing costs 15,800 48,580 40,979 6,687 858 29,167 13,471 – – 12,998 254,661 38,766 11,871 – 21,333 1,643 944 6,332 Loss before income taxes Provision for (recovery of) income taxes Current Future (65,224) (277,672) 77% 14,617 4,617 17,725 (6,678) –18% –169% Provision for income taxes 19,234 11,047 74% Loss from continuing operations (84,458) (288,719) 71% (as a % of revenues) Earnings (loss) from discontinued operations –12.5% (10,143) –42.8% 569 –1883% Net loss for the year (94,601) (288,150) 67% Basic and diluted earnings (loss) per share From continuing operations From discontinued operations ($0.91) ($0.11) ($3.11) $0.01 71% –1200% ($1.02) ($3.10) 67% 2007 $ 22% –81% 6% –44% 37% 720% Patheon Inc. 2007 Annual Report 21 Management’s Discussion and Analysis Performance Analysis (continued) Revenues Revenues by Geographic Region and Service Activity Years ended October 31 (in thousands of U.S. dollars, except percentages) 2007 $ 2006 $ % Change North America Commercial Manufacturing Prescription Over-the-counter 270,515 43,076 309,379 66,327 –13% –35% Development Services 313,591 84,532 375,706 74,986 –17% 13% 398,123 450,692 –12% Europe Commercial Manufacturing Prescription Over-the-counter 243,554 3,473 197,353 3,646 23% –5% Development Services 247,027 31,924 200,999 22,968 23% 39% 278,951 223,967 25% Total Commercial Manufacturing Prescription Over-the-counter 514,069 46,549 506,732 69,973 1% –33% Development Services 560,618 116,456 576,705 97,954 –3% 19% Consolidated Revenues 677,074 674,659 0% Revenues Revenues by Geographic Region* (in millions of U.S. dollars) (in millions of U.S. dollars) 658.9 700 674.7 677.1 700 700 658.9 674.7 677.1 197.7 217.6 195.1 600 525 500 432.9 360.0 525 350 203.0 139.3 350 300 122.9 600 500 432.9 360.0 400 700 256.4 233.1 400 300 119.0 200 175 0 0 2003 2004 2005 2006 204.8 2003 2004 2005 2006 279.0 100 0 2007 * Based on site location Patheon Inc. 2007 Annual Report 174.6 224.0 154.5 0 Canada 22 200 82.6 175 100 U.S. Europe 2007 Management’s Discussion and Analysis Consolidated revenues from continuing operations for the year ended October 31, 2007 increased $2.4 million to $677.1 million from $674.7 million in 2006. Rx manufacturing and PDS revenues grew by 1% and 19%, respectively, while OTC manufacturing revenues declined by 33%. For the year ended October 31, 2007, revenues excluding the Puerto Rico operations were $577.3 million, compared with $544.9 million in 2006. Prescription manufacturing and development services represented 93% of revenues in 2007, compared with 90% in 2006. This improvement is consistent with one of the Company’s key performance drivers of increasing the percentage of highermargin Rx and PDS business. Geographically, in North America, revenues for the year ended October 31, 2007 declined by $52.6 million or 12% relative to the prior year. The decline reflected a significant reduction in OTC volumes in the Whitby and Cincinnati operations as certain clients have repatriated products back to their own manufacturing networks. Rx volumes declined in Caguas and Carolina, Puerto Rico as a result of lower production of Zocor® and Omnicef®, both of which were impacted by the introduction of competitive generic products, and from lower volumes of Levothyroxine sodium, where the Company’s client suffered a significant decline in market share (2). Rx revenues were also lower in Canada principally as a result of lower volumes for a product where in 2006 the Company’s client was building trade inventory levels for a newly launched product. The declines in commercial manufacturing revenues were offset in part by an increase in PDS revenues in Canada and Cincinnati. In Europe, revenues for the year ended October 31, 2007 were $55.0 million or 25% higher than 2006. The increase in revenues reflected higher Rx manufacturing revenues from operations in Italy and France, arising from the continued benefits from two carve out initiatives, where the Company is manufacturing a range of products for two clients that have closed down facilities within their own manufacturing networks. In Swindon, U.K. the PDS operations also continued to show further increases in volumes, but these gains were offset in part by lower pre-launch commercial revenues for cephalosporin lyophilization services and production delays during the fourth quarter. In 2007, the Euro and U.K. sterling strengthened approximately 9% and 10%, respectively, against the U.S. dollar compared with the prior year, increasing reported revenues by approximately $22.9 million. Had European currencies remained constant to the rates of the prior year, European revenues would have been 14% higher than in 2006. Operating Expenses Operating expenses comprise processing costs (principally materials, employee and other site-related costs), marketing, sales, service, corporate support, administrative expenses and foreign exchange gains and losses relating to operating activities. For the year ended October 31, 2007 operating expenses were $599.1 million, compared with $603.8 million in the same period a year ago, a decline of 1%. The decline reflects savings from the performance enhancement program, offset in part by the strengthening European and Canadian currencies relative to the U.S. dollar. Operating expenses in 2007 are net of an actuarial gain of $4.3 million arising from a decision to phase out certain post retirement benefits in the Canadian operations. Operating expenses as a percentage of revenues were 88.5%, compared with 89.5% in the prior year. Revenues by Service Activity 100 11% 100 15% 14% 15% 17% 75 75 72% 50 70% 75% 75% 76% 25 50 25 17% 15% 11% 10% 7% 2003 2004 2005 2006 2007 0 PDS Rx 0 OTC (2) Zocor is a registered trademark of Merck & Co., Inc. Patheon Inc. 2007 Annual Report 23 Management’s Discussion and Analysis Performance Analysis (continued) Foreign Exchange Gain on Debt The foreign exchange gain of $12.3 million recorded in the year ended October 31, 2007 related to the revaluation of U.S. dollar denominated debt in the Canadian legal entity that is not designated as an effective hedge against its investments in subsidiaries in the U.S.A and Puerto Rico. In October 2007, the Company entered into a forward foreign exchange contract to reduce the future related impact on earnings. EBITDA Before Repositioning Expenses and EBITDA Margin Before Repositioning Expenses In 2007, EBITDA before repositioning expenses, representing earnings from continuing operations before repositioning expenses, asset impairment charges, depreciation and amortization, foreign exchange losses reclassified from other comprehensive income, interest, refinancing expenses, write-off of deferred financing costs, and income taxes was $90.3 million, an increase of $19.4 million, or 27%, from 2006. EBITDA margin before repositioning expenses was 13.3% in 2007, compared with 10.5% in 2006. For the year ended October 31, 2007, EBITDA before repositioning expenses excluding the Puerto Rico operations was $108.6 million, compared with $69.5 million in the same period last year. This represented an EBITDA margin before repositioning expenses of 18.8% in 2007, compared with 12.7% in 2006. The Canadian commercial operations reported EBITDA before repositioning expenses of $29.5 million in 2007, or $6.9 million higher than in 2006. This improvement was achieved despite lower Rx and OTC volumes and reflected savings from the EBITDA Before Repositioning Expenses EBITDA before repositioning expenses from the U.S.A. commercial operations (including Puerto Rico) in 2007 was a loss of $7.2 million, compared with a profit of $14.0 million in 2006. The decline principally reflects a reduction in Rx manufacturing volumes in the Caguas facility in Puerto Rico. In Carolina, volume declines were offset by benefits from the performance enhancement program. In Cincinnati, volume declines were offset by savings from the performance enhancement program and a change in the revenue mix to higher margin Rx business. In Europe, EBITDA before repositioning expenses from commercial operations in 2007 was $36.9 million, being $10.1 million higher than in 2006. The improvement reflects increased volumes in the operations in Italy and France, offset in part in Swindon by lower pre-launch revenues for the cephalosporin lyophilization services, fourth quarter production delays and foreign exchange losses. The stronger European currencies relative to the U.S. dollar compared with the same period last year also had the impact of increasing EBITDA before repositioning expenses by approximately $2.9 million. EBITDA Margin Before Repositioning Expenses (in millions of U.S. dollars) (% of revenues) 94.0 100 performance enhancement program, in particular at the Whitby operations. The improvement also included a significant portion of the actuarial gains arising from a change in the Company’s post retirement benefit plans. EBITDA before repositioning expenses was not significantly impacted by foreign exchange, as the negative earnings impact of the 3% increase in the average Canadian dollar exchange rate relative to the U.S. dollar was offset by foreign exchange gains from the Company’s cash flow hedging program. 90.3 (3) 15 14.3% 100 13.3% (3) 12.6% 50 12 70.9 (2) 75 45.3 11.5% 12 10.5% (2) 75 9 49.8 (1) 9 50 6 25 3 0 0 2003 2004 2005 2006 (1) Before Swindon, U.K. repositioning expenses of $4.4 million (2) Before global repositioning expenses of $13.0 million (3) Before global repositioning expenses of $15.8 million 24 Patheon Inc. 2007 Annual Report 15 (1) 2007 6 25 3 0 0 2003 2004 2005 2006 (1) Before Swindon, U.K. repositioning expenses of $4.4 million (2) Before global repositioning expenses of $13.0 million (3) Before global repositioning expenses of $15.8 million 2007 Management’s Discussion and Analysis EBITDA before repositioning expenses from the global PDS operations in 2007 was $30.7 million, being $10.7 million higher than in 2006. The improved profitability was a result of growing volumes across all operations. Corporate costs in 2007 reflected a net recovery of $0.4 million, compared with costs of $12.4 million in 2006. The 2007 recovery included foreign exchange gains of $12.3 million arising from the revaluation of U.S. dollar denominated debt, net of hedging activities, held in the Canadian legal entity. In October 2007, the Company hedged its net U.S. dollar balance sheet exposure, which is expected to reduce future volatility. Repositioning Expenses In 2007, the Company incurred repositioning expenses of $15.8 million in connection with its performance enhancement program, the site rationalization program in Puerto Rico and Canada and its review of strategic and financial alternatives. The expenses included consulting fees associated with the manufacturing efficiency review, costs associated with reductions in the workforce and professional and other costs in connection with the strategic alternatives review. In 2006, the Company incurred $13.8 million of expenses in connection with its performance enhancement program, amendments to its North American bank financing facilities and its review of strategic and financial alternatives. The expenses included costs associated with a reduction in the workforce and consulting and professional fees. Asset Impairment Charge In 2007, it was determined that the carrying value of the intangible assets and depreciable tangible capital assets (collectively the “long-lived depreciable assets”) at the Company’s operations in Carolina, Puerto Rico were impaired as a result of volume declines arising from the genericization of Omnicef®, the largest single product that is manufactured at the facility. The Company tested the recoverability of the long-lived depreciable assets at the Carolina operations and determined that the expected future cash flows over the economic life of the principal assets were less than the carrying value of the long-lived depreciable assets. As a result, the Company recorded an impairment charge of $48.6 million; $26.1 million for intangible assets and $22.5 million for tangible capital assets. The fair value of the intangible assets was determined using a discounted cash flow methodology and the fair value of the tangible capital assets was based on a weighted average continued use and liquidation value. In 2006, the Company determined that the carrying value of the long-lived depreciable assets at the Company’s operations in Caguas and Manati, Puerto Rico and the goodwill associated with all of the Puerto Rico operations were impaired as a result of certain events which occurred during the third quarter of 2006. These events included: continued deterioration in revenues culminating in a significant increase in losses reported in the third quarter of 2006; suspension of production of a major product due to concerns over product shelf life; the risk of a decline in revenue of another major product as a result of the approval by the U.S. Food and Drug Administration of a generic version of the product; and the completion of a long-range plan that showed a significant reduction in earnings relative to prior forecasts. The Company tested the recoverability of the long-lived depreciable assets for all of the Puerto Rico operations and determined that at Caguas and Manati the expected future cash flows over the economic life of the principal assets were less than the carrying value of the long-lived depreciable assets. As a result, the Company recorded an impairment charge of $81.4 million; $51.9 million for intangible assets and $29.5 million for tangible capital assets. The fair value of the intangible assets was determined using a discounted cash flow methodology and the fair value of tangible capital assets was based on a value in continued use, taking into account utilization levels. In 2006, the Company also tested the recoverability of the goodwill associated with Puerto Rico operations using a discounted cash flow methodology, and recorded an impairment charge of $172.5 million representing the full value of the Puerto Rico goodwill. In 2006, the Company, as part of its ongoing review of long-term investments, concluded that its investment in the shares of a drug technology company which was accounted for on the cost basis had an other than temporary decline and wrote down its value by $0.8 million to its market value as of July 31, 2006. Patheon Inc. 2007 Annual Report 25 Management’s Discussion and Analysis Performance Analysis (continued) Depreciation and Amortization Expense Depreciation and amortization expense, excluding amortization of intangible assets, was $41.0 million in 2007, compared with $38.8 million in 2006, an increase of $2.2 million, or 6%. The increase principally reflected the effect of the strengthening European and Canadian currencies relative to the U.S. dollar, offset in part by lower depreciation charges from the Puerto Rico operations as a result of the impairment charges recorded in 2007 and 2006. Depreciation and amortization expense includes the amortization of deferred pre-operating costs. Amortization of Intangible Assets The amortization of intangible assets was $6.7 million in 2007, compared with $11.9 million in 2006. The amortization of intangible assets relates to the Puerto Rico operations. The charge was lower than for the same period last year due to the impact of the impairment charges recorded during the third quarters of 2007 and 2006. Foreign Exchange Loss on Foreign Operations In 2007, the Company recorded a net foreign exchange loss of $0.9 million. This reflected the recognition of net foreign exchange translation losses previously recorded in accumulated other comprehensive income, arising from a change in the Company’s internal capital structure. Net Earnings (Loss) From Continuing Operations Before Repositioning Expenses and Asset Impairment Charge (in millions of U.S. dollars) 20 Interest Expense and Amortization of Deferred Financing Costs The interest expense in 2007 was $29.2 million, compared with $21.3 million in 2006. The increase in interest costs in the first half of the year reflected higher debt levels, along with increased borrowing costs as a result of the amendments to the Company’s North American loan facilities. The interest expense in the second half of 2007 reflected the impact of the Company’s refinancing that was completed on April 27, 2007 and included a non-cash accretive interest charge of $7.1 million in respect of the debt component of the convertible preferred shares. In 2007, the Company adopted CICA Accounting Standard Section 3855 for the accounting of financial instruments, including its policy on deferring costs of obtaining bank and other debt financing (see “Critical Accounting Policies and Estimates”). As a result, amounts that in prior periods were recorded as amortization of deferred financing costs are now recorded in interest expense. Refinancing Expenses and Write-off of Deferred Financing Costs In 2007, refinancing expenses of $13.5 million were incurred in connection with the Company’s refinancing that took place on April 27, 2007 (see “Recent Developments”). The expenses were made up of transaction costs for the new credit facilities, transaction costs allocated to the debt portion of the convertible preferred shares and repayment charges in connection with the cancellation of certain of the Company’s U.K. debt facilities. EPS – Basic (Before Repositioning Expenses and Asset Impairment Charge) (in U.S. cents) 19.7 16.3 40 12.6 (1) 20 40 32 25 (1) 10 10 23 20 0 20 0 -10 0 -20 -10 0 -20 (25.2) (2) -30 (21.8) (3) -20 -20 -30 (28) -40 -40 2003 2004 2005 2006 2007 (1) Before Swindon U.K. repositioning expenses of $3.1 million after tax (2) Before global repositioning expenses of $11.4 million after tax and an asset impairment charge of $252.1 million after tax (3) Before global repositioning expenses of $14.9 million after tax and an asset impairment charge of $47.8 million after tax 26 Patheon Inc. 2007 Annual Report (2) (24) (3) -40 -40 2003 2004 2005 2006 2007 (1) Before Swindon, U.K. repositioning expenses of 6 cents per share after tax (2) Before global repositioning expenses of 12 cents per share after tax and an asset impairment change of $2.71 after tax (3) Before global repositioning expenses of 16 cents per share after tax and an asset impairment charge of 51 cents per share after tax Management’s Discussion and Analysis In 2006, the Company incurred charges of $1.6 million in connection with the cancellation and prepayment of certain of its North American credit facilities. The Company also wrote off $6.3 million in related deferred financing costs. Loss Before Income Taxes from Continuing Operations The Company reported a loss before income taxes of $65.2 million for the year ended October 31, 2007, compared with a loss before income taxes of $277.7 million in 2006. Income Taxes The income tax expense for the year ended October 31, 2007 was $19.2 million, compared with $11.0 million in 2006. The income tax charge in 2007 principally reflected high tax rates in Italy where the Company reported increased taxable income, compounded by tax losses in certain entities in Puerto Rico and Canada, where the tax benefit after valuation reserves was not recognized. The 2007 expense included a charge of $2.1 million in connection with an inter-company dividend payment and a charge of $1.9 million in connection with the transfer of net foreign exchange losses from accumulated other comprehensive income. The 2006 charge included a valuation reserve charge of $6.4 million against future tax asset balances in the Canadian operations. Loss and Loss Per Share from Continuing Operations The Company recorded a loss from continuing operations for the year ended October 31, 2007 of $84.5 million, compared with a loss of $288.7 million in the same period a year ago. The loss per share was 91¢ compared with $3.11 a year earlier. The loss in 2007 included an after tax asset impairment charge of $47.8 million, or 51¢ per share, after tax repositioning expenses of $14.9 million, or 16¢ per share and after tax refinancing expenses of $12.6 million, or 14¢ per share. The loss in 2006 included an after tax asset impairment charge of $252.1 million, or $2.71 per share, after tax repositioning expenses of $11.4 million or 12¢ per share and after tax refinancing expenses and charges for the write-off of deferred financing costs of $6.2 million, or 7¢ per share. Earnings (Loss) and Earnings (Loss) Per Share from Discontinued Operations Discontinued operations include the results of the NiagaraBurlington Operations. The results from discontinued operations for the years ended October 31, 2007 and 2006 were as follows: Years ended October 31 (in thousands of U.S. dollars) 2007 $ 2006 $ 35,244 32,475 37,493 34,580 Earnings before the following: 2,769 2,913 (as a % of revenues) Asset impairment charge Repositioning expenses (recovery of) Depreciation and amortization 7.9% 12,465 7.8% – (397) 844 789 1,112 Earnings (loss) before income taxes Provision for income taxes (10,143) – 1,012 443 Earnings (loss) from discontinued operations for the year (10,143) 569 Revenues Operating expenses The net loss from discontinued operations for the year ended October 31, 2007 was $10.1 million, or 10.9¢ per share compared with net earnings of $0.6 million or 1¢ per share in 2006. The net loss in 2007 included an asset impairment charge of $12.5 million, or 13¢ per share to write down the capital assets to their fair market value less the estimated cost to sell. Net Loss and Loss Per Share The Company recorded a net loss for the year ended October 31, 2007 of $94.6 million or $1.02 per share, compared with a loss of $288.2 million or $3.10 per share in 2006. Because the Company reported a loss in the years ended October 31, 2007 and 2006 there is no impact of dilution. Patheon Inc. 2007 Annual Report 27 Management’s Discussion and Analysis Performance Analysis (continued) Selected Quarterly Financial Information The following is selected financial information for the eight most recent quarters: Quarter ended (in thousands of U.S. dollars, except per share amounts) Revenues $ EBITDA Before Repositioning Expenses $ 2007 January 31 April 30 July 31 October 31 162,808 171,966 175,508 166,792 22,793 23,153 23,138 21,234 (2,188) (22,552) (50,668) (9,050) ($0.02) ($0.24) ($0.55) ($0.10) (2,024) (21,986) (63,069) (7,522) ($0.02) ($0.24) ($0.68) ($0.08) 677,074 90,318 (84,458) ($0.91) (94,601) ($1.02) 2006 January 31 April 30 July 31 October 31 150,013 180,157 178,739 165,750 13,880 23,244 14,990 18,762 (11,408) 2,549 (257,698) (22,162) ($0.12) $0.03 ($2.78) ($0.24) (11,510) 2,989 (257,213) (22,416) ($0.12) $0.03 ($2.77) ($0.24) 674,659 70,876 (288,719) ($3.11) (288,150) ($3.10) The loss from continuing operations in the quarter ended April 30, 2007 included after tax asset refinancing expenses of $14.9 million or 16¢ per share. The loss from continuing operations in the quarter ended July 31, 2007 included an after tax asset impairment charge of $47.8 million or 51¢ per share. The loss from continuing operations for the quarter ended January 31, 2006 included refinancing expenses and charges for the write-off of deferred financing costs of $6.2 million, or 7¢ per share. The loss from continuing operations for the quarter ending July 31, 2006 included an after tax asset impairment charge of $252.1 million, or $2.71 per share. The loss from continuing operations for the quarter ending October 31, 2006 included an after tax charge for repositioning expenses of $11.4 million, or 12¢ per share. Seasonal Variability of Results Historically, the Company’s manufacturing and PDS revenues typically have been lower in the first fiscal quarter. The Company attributes this to several factors, including: (i) many clients reassess their need for additional product in the last quarter of the calendar year in order to use existing inventories of products; 28 Patheon Inc. 2007 Annual Report Net Earnings (Loss) From Continuing Operations $ Basic and Diluted Earnings (Loss) Per Share From Continuing Operations $ Net Earnings (Loss) $ Basic and Diluted Earnings (Loss) Per Share $ (ii) the lower production of seasonal cough and cold remedies; (iii) many small pharmaceutical and small biotechnology clients involved in PDS projects limit their project activity toward the end of the calendar year in order to reassess progress on their projects and manage cash resources; and (iv) the Patheon-wide plant shut-down during a portion of the traditional holiday period in December and January. Revenues in the fourth fiscal quarter are also typically impacted by summer shut downs during August in the European operations. Outlook for 2008 Due to normal shut downs during December and other seasonal factors, revenues from continuing operations in the first quarter of 2008 are anticipated to be lower than the fourth quarter of 2007. Revenues from continuing operations for fiscal 2008 are expected to be comparable to 2007. This expectation is based on internal management forecasts, which in turn are based on client purchase orders and forecasts of anticipated demand and other factors. These internal management forecasts were prepared for internal planning purposes and may not be appropriate for forecasting future financial results or for other purposes. Management’s Discussion and Analysis Liquidity and Capital Resources Summary of Cash Flows The following table summarizes the cash flows for the periods indicated: (in thousands of U.S. dollars) 2007 $ Loss from continuing operations Asset impairment charge Depreciation and amortization Foreign exchange loss on foreign operations Foreign exchange gain on debt Accreted interest on convertible preferred shares Write-off of deferred financing costs Amortization of deferred financing costs Employee future benefits, net of contributions Future income taxes Amortization of deferred revenues Other Working capital Increase in deferred revenues (84,458) 48,580 47,666 858 (12,331) 7,054 – 1,657 (4,846) 4,617 (2,021) 2,087 (2,442) 2,065 Cash provided by operating activities of continuing operations Cash provided by operating activities of discontinued operations 8,486 3,105 2006 $ (288,719) 254,661 50,637 – – – 6,332 944 1,112 (6,678) (1,978) 1,587 20,506 9,614 48,018 4,212 Cash provided by operating activities Cash used in investing activities Cash provided by financing activities Other 11,591 (39,938) 4,221 3,960 52,230 (69,752) 44,460 1,278 Net increase (decrease) in cash and cash equivalents (20,166) 28,216 Cash Provided by Operating Activities Cash provided by operating activities from continuing operations was $8.5 million in 2007, compared with $48.0 million in 2006. The deterioration reflects lower earnings before non-cash charges. Cash flows in 2006 also benefitted from a net reduction in the investment in working capital of $20.5 million, compared with an increase in working capital of $2.4 million in 2007. In 2007, the Company received $2.1 million from clients to assist in the funding of capital expenditure projects that are tied to specific manufacturing and supply Cash Provided by Operating Activities of Continuing Operations (in millions of U.S. dollars) 70.8 75 75 60 60 48.0 42.6 45 30 45 28.0 30 15 8.5 0 0 2003 15 2004 2005 2006 2007 Patheon Inc. 2007 Annual Report 29 Management’s Discussion and Analysis Performance Analysis (continued) agreements. This compares with $9.6 million that was received in 2006. These amounts are recorded as an increase in deferred revenues and will be recognized as income over the life of the commercial manufacturing contract. Cash provided by operating activities of discontinued operations in 2007 was $3.1 million, compared with $4.2 million in 2006. The reduction principally reflected an additional benefit from reduced working capital in 2006 relative to 2007. Cash Used in Investing Activities The following table summarizes the cash used in investing activities for the periods indicated: (in thousands of U.S. dollars) 2007 $ 2006 $ Additions to capital assets Sustaining Project-related (18,034) (17,768) (16,975) (49,617) Total additions to capital assets (35,802) (66,592) (202) (49) (3,659) (2,204) (39,663) (68,845) (275) (907) (39,938) (69,752) Net increase in investments Increase in deferred pre-operating costs Cash used in investing activities of continuing operations Cash used in investing activities of discontinued operations Cash used in investing activities Interest-Bearing Debt to Shareholders’ Equity During 2007, the Company’s major project-related programs (in millions) were: 3 Swindon facility in U.K., in connection with the construction of a facility for the manufacture of sterile lyophilized cephalosporin products . . . . . . . . . . . . . . . . . . . . . . . $5.3 3 Cincinnati facility in U.S.A., installation of an intermediate-scale process train .. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . $1.3 Capital commitments to complete authorized capital projects were $15.8 million at October 31, 2007. Based on current internal projections, these expenditures are expected to be incurred during the fiscal year ending October 31, 2008. These (in millions of U.S. dollars) 539.9 550 440 139.4% 150 The Company’s principal ongoing investment activities are sustaining and project-related capital programs at its network of sites. The majority of the Company’s capital allocation is normally invested in project-related programs, which are defined as outlays that will generate growth in capacity and revenues, while sustaining expenditures relate to the preservation of existing assets and capacity. The Company invested $35.8 million in capital expenditures in 2007 compared with $66.6 million in 2006, of which project-related expenditures were $17.8 million in 2007 and $49.6 million in 2006. Shareholders’ Equity 184.4% (1) 200 Cash used in investing activities from continuing operations in 2007 was $39.7 million, compared with $68.8 million in 2006. The decrease principally reflected lower project-related capital expenditures on the cephalosporin lyophilization capacity in the Swindon, U.K. facility. The major expenditures for this expansion were incurred in 2006. The increase in deferred preoperating costs of $3.7 million in 2007 related to the lyophilized cephalosporin facility in Swindon, U.K. Deferred pre-operating costs are amortized over a period of five years from the date of start-up. 550 200 440 150 330 100 59.1% 65.9% 110 0 0 2003 2004 2005 2006 (1) Interest-bearing debt includes the debt component of convertible preferred shares of $139.9 million Patheon Inc. 2007 Annual Report 193.9 220 56.1% 50 30 330 100 2007 250.7 221.4 197.2 50 220 110 0 0 2003 2004 2005 2006 2007 Management’s Discussion and Analysis expenditures will be financed from cash flows from operations, existing cash reserves and credit facilities and from a new capital lease that has been negotiated. 3 Plant expansion in Whitby, Ontario to support the consolidation of the York Mills operations; The principal financing activity for the year ended October 31, 2006 was the completion of new credit facilities in North America in the aggregate amount of $290.0 million ($275.0 million as amended) to refinance existing debt of the Company and its U.S. subsidiaries (including those in Puerto Rico). These facilities were subsequently replaced in 2007. During 2006, the Company’s Italian subsidiary also entered into a new long-term debt facility in the amount of 28.5 million euros ($33.9 million) to replace existing loans. 3 Plant expansion at the Toronto Region Operations, Ontario to support additional capacity for oral contraceptive products; Financing Arrangements Project-related capital expenditures in fiscal 2008 are expected to be higher than in 2007. The major project-related capital programs currently anticipated for 2008 consist of: 3 Swindon, U.K. facility, completion of the lyophilized cephalosporin project; and The $150 million 8.5% convertible preferred shares purchased by JLL Partners on April 27, 2007 represent 150,000 units, each consisting of one Class I Preferred Share, Series C (a convertible preferred share) and one Class I Preferred Share, Series D (a special voting preferred share) at a purchase price of $1,000 per unit. 3 Cincinnati facility in U.S.A., continuing costs for installation of the intermediate-scale process train. Cash Provided by Financing Activities The following table summarizes the cash provided by financing activities for the periods indicated: (in thousands of U.S. dollars) Increase (decrease) in bank indebtedness Increase in long-term debt Repayment of long-term debt Issue of convertible preferred shares Convertible preferred share issue costs – equity component Issue of restricted voting shares Repurchase of restricted voting shares Decrease in restricted cash Increase in deferred financing costs Cash provided by financing activities 2007 $ 3,532 198,108 (337,452) 2006 $ (11,096) 416,389 (364,800) 150,000 – (1,213) – 24 127 (8,778) – – 7,805 – 4,221 (3,965) 44,460 The principal financing activity for the year ended October 31, 2007 was the issue, through a private placement, of $150 million of convertible preferred shares of the Company to JLL Partners and the completion of new credit facilities in the aggregate amount of $225 million, comprising of a seven-year $150 million term loan and a five-year $75 million revolving facility. The net proceeds from the JLL Partners investment and the seven-year term loan were used to repay the Company’s obligations under its existing North American and U.K. credit facilities. In 2007, the Company also used $8.8 million of cash to repurchase 2,334,300 of its restricted voting shares under a normal course issuer bid. Convertible Preferred Shares Until October 27, 2009, no cash dividends will be paid, but the liquidation preference and conversion rate will increase on a quarterly basis by 2.125%. After October 27, 2009, these increases in the liquidation preference and conversion rate will continue until the maturity or prior conversion of the convertible preferred shares, unless the Company elects to pay a cash dividend for any applicable quarter, in which case the Company will pay a cash dividend for such quarter based on an annual dividend rate of 8.5% on the aggregate liquidation preference of the convertible preferred shares. At October 31, 2007, each convertible preferred share was convertible into 218.7154 Patheon restricted voting shares, as adjusted for any non-cash dividends noted above, at any time at the holder’s option. The Company will be entitled to require the holder to convert into restricted voting shares if, at any time after October 27, 2009, the market price of the restricted voting shares on the Toronto Stock Exchange exceeds a price equivalent to US$7.87 for a period of at least 60 days. If not previously converted, the Company is required to redeem the convertible preferred shares for cash on April 27, 2017 at a price equal to the aggregate liquidation preference of the convertible preferred shares, plus accrued and unpaid dividends thereon. The Company is also required to redeem the convertible preferred shares upon the occurrence of a change of control of Patheon at a price equal to the greater of the aggregate liquidation preference of the convertible preferred shares, plus accrued and unpaid dividends thereon, or the price per share paid to holders of restricted voting shares in the change of control transaction, multiplied by the number of restricted voting shares into which the convertible preferred shares are then convertible. The convertible preferred shares have the right to vote, together with the holders of the restricted voting shares, on an as-if converted basis, in respect of all matters other than the election of directors. As at October 31, 2007, these convertible preferred shares were convertible into approximately 32.8 million Patheon Inc. 2007 Annual Report 31 Management’s Discussion and Analysis Performance Analysis (continued) restricted voting shares of the Company, which would represent approximately 27% of the restricted voting shares outstanding as at that date, after giving effect to such conversion. The special voting preferred shares have the right to appoint up to three directors. The convertible preferred shares are considered to be a compound financial instrument with both a debt and equity component. On issuance, the fair value of the debt component was $132.9 million. The remainder of the proceeds, attributable to shareholders’ equity was $15.9 million, net of apportioned transaction costs of $1.2 million. (See Convertible Preferred Shares in “Critical Accounting Policies and Estimates”). At October 31, 2007 the carrying value of the debt component of the convertible preferred shares was $139.9 million. Financing Ratios $225 Million Credit Facilities On April 27, 2007 the Company completed new credit facilities in the aggregate amount of $225 million, comprising a seven-year $150 million senior secured term loan and a five-year $75 million asset based revolving credit facility. The Company is required to make quarterly installment payments of $375,000 on the term loan facility, along with additional mandatory repayments based on certain excess cash flow measures. Interest on the facilities is at floating rates based on LIBOR, US or CAD prime, or the federal funds effective rate, plus applicable margins. The Company has entered into interest rate swaps to convert the interest expense on the $150 million senior secured term loan from a floating interest rate to a fixed interest rate. The facilities are secured by substantially all of the assets of the Company’s Fixed rate Variable rate based on: Prime - Canada U.S. base rate U.S. LIBOR (1 month) Euribor (3 months) U.K. LIBOR U.K. base rate operations in Canada, U.S.A., Puerto Rico and the U.K. and the Company’s investments in the shares of all other operating subsidiaries. At October 31, 2007 the balance on the senior secured term loan was $149.3 million and $6.7 million was drawn on the revolving credit facility, including letters of credit of $4.2 million. Total interest-bearing debt at October 31, 2007 was $363.7 million, being $14.1 million higher than at October 31, 2006. Total interest-bearing debt in 2007 includes the debt component of the convertible preferred shares of $139.9 million, as the consolidated financial statements include an accretive interest expense in relation to this liability. The Company has no obligation to pay cash dividends on the convertible preference shares until after October 27, 2009, at which time the Company can elect to increase the liquidation preference and conversion rate of the convertible preferred shares rather than paying a cash dividend. At October 31, 2007, the Company’s consolidated ratio of interestbearing debt to shareholders’ equity was 184.4%, compared with 139.4% at October 31, 2006. The increase principally reflects the reduction in shareholders’ equity arising from the losses that the Company has incurred in the twelve months ended October 31, 2007. The following table summarizes the fixed and variable percentages of debt outstanding at October 31, 2007, including the debt component of the convertible preferred shares, and the applicable interest rates at the end of each quarter in 2007. The 2007 numbers reflect the impact of interest rate swap contracts that the Company has entered into: % of Debt Outstanding 2007 2006 81% 7% 0% 0% 1% 18% 0% 0% 7% 2% 61% 19% 3% 1% Interest Rates at End of Each Quarter in 2007 Q4 Q3 Q2 Q1 6.25% 8.25% 4.71% 4.60% 6.28% 5.75% 6.25% 8.75% 5.32% 4.26% 6.04% 5.75% 6.00% 8.75% 5.32% 4.02% 5.73% 5.25% 6.00% 8.75% 5.32% 3.78% 5.59% 5.25% Contractual Obligations Contractual repayments of long-term debt, commitments under operating leases and purchase obligations are as follows: Total Less Than 1 Year 1–3 Years 4–5 Years After 5 Years Long-term debt Operating leases Purchase obligations 219,411 11,354 15,804 11,902 3,113 15,804 21,521 4,872 – 23,507 2,806 – 162,481 563 – Total contractual obligations 246,569 30,819 26,393 26,313 163,044 (in thousands of U.S. dollars) Payments Due by Period Long-term debt includes capital lease obligations. Purchase obligations relate to capital commitments to complete authorized capital projects. 32 Patheon Inc. 2007 Annual Report Management’s Discussion and Analysis Obligations with Respect to Employee Future Benefit Plans The Company’s obligations as at October 31, 2007 with respect to employee future benefit plans were: (in thousands of U.S. dollars) Defined Benefit Pension Plans Other Benefit Plans Projected benefit obligations Less plan assets 81,241 (67,311) 6,809 – 88,050 (67,311) Unfunded amount Unrecognized past service costs and net actuarial losses 13,930 7,265 6,809 400 20,739 7,665 Amount included in other long-term liabilities 6,665 6,409 13,074 Total The Company also provides retirement benefits for the majority of its employees at its Canadian, U.S. and Puerto Rican sites under a defined contribution plan. The total expense for the plan amounted to $7.1 million in 2007 (2006 – $7.6 million). Please refer to note 15 to the consolidated financial statements for further information with respect to the Company’s employee future benefit plans. Off-balance Sheet Arrangements The Company does not engage in off-balance sheet accounting to structure any of its financial arrangements. The Company does not have any interests in unconsolidated special-purpose or structured finance entities. Adequacy of Financial Resources With the completion of the new financing arrangements on April 27, 2007, including the issuance of the convertible preferred shares, the Company believes that, subject to usual business risks as further described in the Risk Management section, its financial resources are sufficient to fund projected capital expenditures, debt service requirements and employee future benefit obligations in the normal course of business. As at October 31, 2007, the Company had cash balances of $30.6 million and $85.7 million in undrawn credit facilities available to it. At October 31, 2007, the Company was in compliance with all covenant requirements under its financing arrangements. The risks associated with going concern uncertainty reported in the Company’s 2006 Annual Report have been eliminated. Additional Information Share Capital As of December 31, 2007, the Company had outstanding 90,624,388 restricted voting shares and 150,000 Class I preferred shares consisting of 150,000 Class I Series C convertible preferred shares and 150,000 Class I Series D special voting shares. At December 31, 2007 the Company had 5,675,916 stock options outstanding of which 4,192,582 were exercisable. Please refer to note 16 to the consolidated financial statements for further information. Related Party Transactions Revenues from companies controlled by a director and significant shareholder of the Company were in the amount of $0.5 million in 2007 (2006 – $3.1 million). These transactions were conducted in the normal course of business and are recorded at the exchanged amount. Accounts receivable at October 31, 2007 includes a balance of $0.4 million (2006 – $0.5) with respect to these related party transactions. At October 31, 2007, the Company has an investment of $0.7 million (2006 – $0.2) representing an 18% interest in two Italian companies (collectively referred to as “BSP Pharmaceuticals”) whose largest investor is an officer of the Company. These companies will specialize in the manufacturing of cytotoxic pharmaceutical products. The Company has accrued management fees owing to it under a management services agreement with BSP Pharmaceuticals of $1.6 million for the year ended October 31, 2007 (2006 – nil). These fees will be invoiced to BSP Pharmaceuticals once it has finalized all of its bank financing. These services were conducted in the normal course of business and are recorded at the exchanged amounts. Patheon Inc. 2007 Annual Report 33 Management’s Discussion and Analysis Risk Management and Accounting Policies Risk Management A comprehensive list of risk factors that may affect the Company are set out in the Company’s most recent Annual Information Form. Patheon applies rigorous assessment, mitigation and management practices to seek to reduce the extent of the operational, financial, regulatory and legal risks affecting its business. Contractual Arrangements The Company has commercial manufacturing services contracts with its clients, typically with multi-year terms. These contracts formalize the standard business arrangements, including production based on the delivery of firm purchase orders. In addition, the contracts generally provide for six to 18 months’ advance notice for the transfer or discontinuance of any product. The Company’s commercial manufacturing clients generally provide a yearly forecast of anticipated product demand. Clients also deliver firm purchase orders, typically three months prior to scheduled production, after which time clients may adjust contract quantities or delivery dates within certain limits, provided that the Company is reimbursed for any expenses incurred in connection with the adjustment. The client assumes liability for all material commitments made in accordance with purchase orders. Patheon maintains the right to negotiate increases in prices based on extraordinary market changes in material costs. The anticipated revenues to be generated by the Company’s major client agreements are not determinable with any precision, as volumes are based on the clients’ market demands from time to time. The Company’s pharmaceutical development services are provided on a fee-for-service basis. The Company typically responds to a request for proposal and, if the proposal is accepted, it normally forms the basis of the contract with the client. Frequently, the scope of work in the initial contract changes over the life of the project in response to research results and client needs. Foreign Currency The Company’s business activities are conducted in several currencies – Canadian dollars and U.S. dollars for the Canadian operations, U.S. dollars for the U.S. operations and euros and U.K. sterling for the European operations. Since the European and U.S. operations conduct business principally in their respective local currencies, the exposure to foreign currency gains and losses is not significant. However, the Company’s Canadian operations negotiate sales contracts for 34 Patheon Inc. 2007 Annual Report payment in both U.S. and Canadian dollars, and materials and equipment are purchased in both U.S. and Canadian dollars. The majority of its non-material costs (including payroll, facilities costs and costs of locally sourced supplies and inventory) are denominated in Canadian dollars. Approximately 70% of revenues of the Canadian operations and approximately 20% of its operating expenses are transacted in U.S. dollars. As a result, the Company may experience trading and translation gains or losses because of volatility in the exchange rate between the Canadian and U.S. dollar. Based on the Company’s current U.S. denominated net inflows, for each one-cent change in the Canadian-U.S. rate, the impact on annual pre-tax earnings is approximately $0.9 million. The Company mitigates this foreign exchange risk by engaging in foreign currency hedging activities using derivative financial instruments. At October 31, 2007, the Company had outstanding foreign exchange forward contracts to sell U.S.$34.2 million at an exchange rate of $1.0535 Canadian. The contracts mature at the latest on April 21, 2008 and cover approximately 75% of the Company’s expected foreign exchange exposure for the first half of the 2008 fiscal year. At October 31, 2007, the balance sheet of the Company’s Canadian operations included $229.5 million of U.S. dollar denominated debt (including the debt component of the Company’s convertible preferred shares). The Canadian operations are required to revalue the Canadian dollar equivalent of the U.S. dollar denominated debt at each period end. At October 31, 2007, $141.6 million of this debt was designated as an effective hedge against the Company’s investments in subsidiaries in the U.S.A. and Puerto Rico. All foreign exchange gains and losses associated with the debt that is considered to be an effective hedge are recorded in other comprehensive income. Foreign exchange gains and losses from the remaining debt are recorded in earnings and are offset in part by gains and losses on the revaluation of U.S. dollar denominated cash and receivables. In order to mitigate future earnings volatility, the Company has entered into a foreign exchange forward contract to buy U.S.$45.0 million at an exchange rate of $1.0015 Canadian. The mark-to-market value at October 31, 2007 that was recorded in earnings is an unrealized loss of $2.7 million. Translation gains and losses related to the carrying value of the Company’s non U.S. dollar denominated foreign operations are deferred and included in accumulated other comprehensive income in shareholders’ equity. The Company does not purchase any derivative instruments for speculative purposes. Management’s Discussion and Analysis Product Liability Claims Environmental and Health and Safety Risks The Company may be subject to liability claims by those who purchase its services and the ultimate consumers of clients’ products it manufactures. The Company manages this risk with a combination of product liability insurance and contractual indemnities and liability limitations in its agreements with its clients. Historically, the Company has been able to obtain liability insurance for the operation of its business. However, there can be no assurance that existing liability insurance will be adequate, or that it will be able to be maintained, or that all possible claims that may be asserted against the Company will be covered by insurance. A partially or completely uninsured claim, if successful and if of sufficient magnitude, could have a material adverse effect on the business, financial condition and results of operations of the Company. The Company has a commitment to safeguard the health of employees and the quality of the environment. Highly qualified environmental, health and safety professionals at all Company locations are dedicated to the maintenance and improvement of programs and procedures to ensure continued employee and environmental protection. To the best of the Company’s knowledge, all of its facilities are in compliance with environmental and occupational health and safety regulations. Interest Rate Exposure The Company has exposure to movements in interest rates. The Company has entered into interest rate swaps to convert the interest expense on its senior secured term loan from a floating interest rate to a fixed interest rate until March 2010. Taking this interest rate swap into account, at October 31, 2007, 19% of the Company’s total debt portfolio, including the debt component of the convertible preferred shares, was subject to movements in floating interest rates. Assuming no change to the structure of the debt portfolio, a 1% change in floating interest rates would have an impact on annual pre-tax earnings of approximately $0.7 million. Credit and Client Concentration The Company, in the normal course of business, monitors the financial condition of its clients and reviews the credit history of each new client. The Company establishes an allowance for doubtful accounts that corresponds to the specific credit risk of its clients, historical trends and economic circumstances. During the year ended October 31, 2007, one client (2006 – two) accounted for more than 10% of the Company’s total revenues. As a percentage of revenues from continuing operations this client amounted to 13% (2006 – 13% and 12%). The Company believes that the risks related to its reliance on its major clients are reduced by a number of factors, including: (a)the negotiation of long-term manufacturing agreements with these clients; (b)the diversity of products and projects undertaken by Patheon; and (c)the expansion of PDS units in both Europe and North America; by increasing the variety of service activities, the Company is increasing its client base, thereby lowering the risk of depending on a small number of clients for a significant portion of its revenues. Regulatory Matters Affecting Manufacturing and Pharmaceutical Development Services The Company is required to comply with the regulatory requirements of the national and international regulatory bodies having jurisdiction in the countries where it manufactures products or where its clients’ products are distributed. As a result, most of the Company’s facilities are subject to regulation by the FDA, and certain facilities are subject to regulation by the Health Products and Food Branch (Canada), the Medicines and Healthcare Products Regulatory Agency (United Kingdom), the European Medicines Evaluation Agency (Europe) and other regulatory bodies. These regulatory requirements impact many aspects of the Company’s operations, including manufacturing, labeling, packaging, adverse event reporting, storage and record keeping related to clients’ products. In addition, if new legislation or regulations are enacted or existing legislation or regulations are amended or are interpreted or enforced differently, the Company may be required to obtain additional approvals or operate according to different manufacturing standards. This may require the Company to change its manufacturing techniques or make capital improvements to its facilities. There can be no assurance that the Company will be able to meet all of the applicable regulatory requirements in the future. If the company fails to comply with applicable regulatory requirements, it may be subject to fines, suspension or withdrawal of regulatory approvals, product recalls, seizure of products, debarment, exclusion, disgorgement of profits, operating restrictions and criminal prosecutions, as well as the loss of contracts and resulting revenue losses. In addition, such failure to comply could expose the Company to contractual and product liability claims, including claims for reimbursement by clients for lost or damaged active pharmaceutical ingredients, the cost of which could be significant. To mitigate this risk, the Company employs highly qualified technical staff at all of its facilities dedicated to maintaining and improving policies and programs to ensure compliance with global quality standards. The Company also strives to meet quality standards through comprehensive and rigorously applied Standard Operating Procedures (“SOPs”), the ongoing training of our employees in current Good Manufacturing Practices (“cGMPs”) and required investment in its facilities, equipment and systems. Patheon Inc. 2007 Annual Report 35 Management’s Discussion and Analysis Risk Management and Accounting Policies (continued) Critical Accounting Policies and Estimates General The Accounting Policies have been reviewed and discussed with the Company’s Audit Committee and are described in note 2 to the audited consolidated financial statements. The most critical of these policies are those related to revenue recognition, deferred revenues, impairment of long-lived depreciable assets, convertible preferred shares, employee future benefits and income taxes (notes 2, 4, 13, 15, 16 and 18 of the audited consolidated financial statements). The preparation of the consolidated financial statements requires management to make estimates and assumptions that affect the reported amounts of assets, liabilities, revenues and expenses. These estimates and assumptions are based upon management’s historical experience and are believed by management to be reasonable under the circumstances. Such estimates and assumptions are evaluated on an ongoing basis and form the basis for making judgments about the carrying values of assets and liabilities that are not readily apparent from other sources. Actual results could differ significantly from these estimates. Changes in Accounting Policy The Company adopted the CICA Handbook Section 3855, Financial Instruments – Recognition and Measurement; Section 3861, Financial Instruments – Disclosure and Presentation; Section 3865, Hedges; Section 1530, Comprehensive Income; and Section 3251, Equity on November 1, 2006. The adoption of the new standards resulted in changes in accounting for financial instruments and hedges as well as the recognition of certain transition adjustments that have been recorded in the deficit account and in accumulated other comprehensive income in the consolidated financial statements. The comparative consolidated financial statements have not been restated as a result of the adoption of the standards, except as noted below. The principal changes in the accounting for financial instruments and hedges due to the adoption of these accounting standards are described below. Financial Assets and Financial Liabilities Under the new standards, all financial instruments are classified into one of the following five categories: held-for-trading, held to maturity investments, loans and receivables, availablefor-sale financial assets and other financial liabilities. All 36 Patheon Inc. 2007 Annual Report financial instruments, including derivatives, are included in the consolidated balance sheet and are measured at fair value except for held to maturity investments, loans and receivables and other financial liabilities, which are measured at amortized cost. Held-for-trading financial instruments are recorded at cost as they are initiated and are subsequently measured at fair value and all revaluation gains and losses are included in net earnings (loss) in the period in which they arise. Available-for-sale financial instruments are also recorded at cost and are subsequently measured at fair value with all revaluation gains and losses included in other comprehensive income. On transition to the new standards, gains from the cancellation of interest rate swaps that had previously been deferred, were recognized in accumulated other comprehensive income. In addition an investment in shares of a publicly traded company was designated as held-for-trading. Prior to the adoption of the new standards, this investment had been accounted for on a cost basis, as adjusted for an other than temporary decline in value. All other financial assets are accounted for on an amortized cost basis and financial liabilities are accounted for on an accrual basis, consistent with prior accounting policies. In connection with the adoption of the new standards, the Company changed its accounting policy relating to costs of obtaining bank and other debt financing. Under the new policy all transaction costs, including fees paid to advisors and other related costs, are expensed as incurred. Financing costs, including underwriting and arrangement fees paid to lenders are deferred and netted against the carrying value of the related debt and amortized into interest expense using the effective interest rate method. The Company previously deferred all transaction and financing costs associated with obtaining bank and other debt financing. The Company believes that the new policy is reliable and more relevant as it results in a more transparent treatment of transaction costs that the Company has incurred in its recent refinancing activities and in the carrying value of debt. The costs of obtaining bank and other debt financing that were previously reported in deferred costs are now netted against the carrying value of the related debt and amortized into interest expense using the effective interest rate method. Prior to the adoption of the new standards, the amortization of deferred financing costs was reported as a separate line in the consolidated statement of earnings (loss) and the amortized balance disclosed in deferred costs on the consolidated balance sheet. Management’s Discussion and Analysis Derivatives and Hedge Accounting Impact of Changes in Accounting Policy The Company enters into foreign currency forward contracts to reduce its exposure to foreign currency denominated cash flows and the change in the fair value of foreign denominated assets and liabilities. The Company also enters into interest rate swap contracts to reduce its exposure to variable interest rates. On transition to the new accounting standards, deferred after tax gains from interest rate swaps of $0.7 million and after tax losses on the fair value of foreign exchange cash flow hedges of $1.4 million were recorded in accumulated other comprehensive income. Accumulated other comprehensive income also includes gains on net investments in self-sustaining foreign operations, net of hedging activities of $36.1 million previously recorded in the cumulative translation adjustment account. As a result, the previously recorded cumulative translation adjustment account has been eliminated and the balances have been included in accumulated other comprehensive income. On transition to the new standards, the comparative amounts of other comprehensive income for the period only reflect the amounts previously recorded in the cumulative translation adjustment account. All derivative instruments are recorded on the consolidated balance sheet at fair value unless exempted from derivative treatment as a normal purchase and sale. All changes in their fair value are recorded in earnings (loss) unless cash flow hedge accounting is used, in which case the changes in the fair value associated with the effective portions of the hedge are recorded in other comprehensive income. Prior to the adoption of the new standards, the Company accounted for derivatives that met the requirements of cash flow hedge accounting on an accrual basis. The Company also holds foreign currency denominated debt as a hedge against the carrying value of its equity investment in certain foreign currency denominated operations. Changes in the fair value of the foreign denominated debt that is designated as an effective hedge of the net investments in foreign operations are recognized in other comprehensive income. Changes in the fair value of the foreign denominated debt that is not considered to be an effective hedge are recorded in earnings (loss). Comprehensive Loss and Accumulated Other Comprehensive Income Comprehensive loss is comprised of the Company’s net loss and other comprehensive income (loss). Other comprehensive income includes foreign currency translation gains and losses on net investments in self-sustaining operations, net of hedging activities, and changes in the fair value of derivative instruments designated as cash flow hedges, all net of income taxes. Amounts accumulated in other comprehensive income are reclassified to the consolidated statement of earnings (loss) in the period in which the hedged item affects the earnings (loss). Foreign currency gains and losses on net investments in self-sustaining foreign operations, net of hedging activities, accumulated in other comprehensive income are reclassified to the consolidated statement of earnings (loss) upon the repatriation, reduction or disposal of the investment in the foreign operation. The change in policy relating to the costs of obtaining bank and other debt financing had the effect of increasing the retained deficit at November 1, 2006 by $1.7 million. Refinancing expenses for the year ended October 31, 2007 include transaction costs incurred in connection with the completion of the Company’s senior secured credit facilities and the debt component of the convertible preferred shares of $11.9 million. Revenue Recognition The Company recognizes revenue for its commercial manufacturing and pharmaceutical development services when services are completed in accordance with specific agreements with its clients and when all costs connected with providing these services have been incurred, the price is fixed or determinable and collectability is reasonably assured. Customer deposits on pharmaceutical development services in progress are included in accounts payable and accrued liabilities. The Company does not receive any fees on signing of contracts. In the case of pharmaceutical development services, revenue is recognized on the achievement of specific milestones in accordance with the respective development services contract. In the case of commercial manufacturing services, revenue is recognized when services are complete and the product has met rigourous quality assurance testing. Patheon Inc. 2007 Annual Report 37 Management’s Discussion and Analysis Risk Management and Accounting Policies (continued) Deferred Revenues Employee Future Benefits The costs of certain capital assets are reimbursed to the Company by the pharmaceutical companies that are to benefit from the improvements in connection with the manufacturing and packaging agreements in force. These reimbursements are recorded as deferred revenues and are recognized as income over the remaining minimum term of the agreements. During 2007, $2.0 million was recognized as earnings and $2.1 million was received as a capital expenditure reimbursement. The Company provides a number of benefit plans to its employees including: (a) defined benefit pension plans; (b) post-employment benefit plans; (c) defined contribution pension plans; and (d) unfunded termination indemnities. Impairment of Long-lived Depreciable Assets The Company reviews whether there are any indicators of impairment of its capital assets and identifiable intangible assets (“long-lived depreciable assets”). If such indicators are present, the Company assesses the recoverability of the assets or group of assets by determining whether the carrying value of such assets can be recovered through undiscounted future cash flows. If the sum of undiscounted future cash flows is less than the carrying amount, the excess of the carrying amount over the estimated fair value, based on discounted future cash flows, is recorded as a charge to earnings. In 2007 the Company recorded an impairment charge of $48.6 million. Convertible Preferred Shares The Company’s convertible preferred shares are considered to be a compound financial instrument that contains both a debt component and an equity component. On issuance of the convertible preferred shares, the fair value of the debt component is determined by discounting the expected future cash flows over the expected life using a market interest rate for a non-convertible debt instrument with similar terms. The value is carried as debt on an amortized cost basis until extinguished on conversion or redemption. The remainder of the proceeds are allocated as a separate component of shareholders’ equity, net of transaction costs. Transaction costs are apportioned between the debt and equity components based on their respective carrying amounts when the instrument was issued. On conversion, the carrying amount of the debt component and the equity component are transferred to share capital and no gain or loss is recognized. The interest cost recognized in respect of the debt component represents the accretion of the liability, over its expected life using the effective interest method, to the amount that would be payable if redeemed. In 2007, the interest cost recognized in respect of the debt component of the preferred shares was $7.1 million. 38 Patheon Inc. 2007 Annual Report The cost of defined benefit pension plans and other postemployment benefits, which include health care and dental benefits, related to employees’ current service is charged to earnings annually. The cost is computed on an actuarial basis using the projected benefit method pro-rated on service and management’s best estimates of various actuarial factors, including salary escalation, other cost escalation and retirement ages of employees. The valuation of defined benefit pension plan assets is at current market value for purposes of calculating the expected return on plan assets. Past service costs resulting from plan amendments are deferred and amortized on a straight-line basis over the remaining service life of employees active at the time of amendment. Actuarial gains and losses arise from the difference between the actual long-term rate of return on plan assets for a period and the expected long-term rate of return on plan assets for that period, or from changes in actuarial assumptions used to determine the accrued benefit obligation. The excess of the net accumulated actuarial gain or loss over 10% of the greater of the benefit obligations and the fair value of plan assets is amortized over the average remaining service period of active employees. The determination of the obligation and expense for defined benefit pensions and other post-employment benefits is dependent on the selection of certain assumptions used by actuaries in calculating such amounts. Those assumptions are disclosed in note 15 to the Company’s 2007 audited consolidated financial statements. In 2007, the Company recorded a net expense of $1.8 million in connection with its defined benefit pension and other post-employment benefit pension plans. This included a curtailment gain of $4.3 million in connection with a decision made to phase out benefits under one of the Company’s post-employment benefit plans. The cost of defined contribution pension plans is charged to earnings as funds are contributed by the Company. In 2007, the Company recorded an expense of $7.2 million in connection with these plans. Management’s Discussion and Analysis Income Taxes The Company follows the liability method of income tax allocation. Under this method, future tax assets and liabilities are determined based on differences between the financial reporting and tax bases of assets and liabilities and are measured using the substantively enacted tax rates and laws that will be in effect when the differences are expected to reverse. Preparation of the consolidated financial statements requires an estimate of income taxes in each of the jurisdictions in which the Company operates. The process involves an estimate of the Company’s current tax exposure and an assessment of temporary differences resulting from differing treatment of items such as depreciation and amortization for tax and accounting purposes. These differences result in future tax assets and liabilities and are reflected in the consolidated balance sheet. Future tax assets of $31.1 million have been recorded at October 31, 2007. This consists primarily of accounting provisions related to pension and post-retirement benefits not currently deductible for tax purposes, the tax benefit of net operating loss carryforwards related to the U.K. operations, unclaimed R&D expenditures and deferred financing and share issue costs. The Company evaluates quarterly the ability to realize its future tax assets. The factors used to assess the likelihood of realization are the Company’s forecast of future taxable income and available tax planning strategies that could be implemented to realize the future tax assets. Future tax liabilities of $47.6 million have been recorded at October 31, 2007. This liability has arisen primarily on tax depreciation in excess of book depreciation. The Company’s tax filings are subject to audit by taxation authorities. Although management believes that it has adequately provided for income taxes based on the information available, the outcome of audits cannot be known with certainty and the potential impact on the financial statements is not determinable. Effectiveness of Disclosure Controls and Internal Controls Disclosure controls and procedures are designed to provide reasonable assurance that all relevant information is gathered and reported to senior management, including the Chief Executive Officer (“CEO”) and the Chief Financial Officer (“CFO”), on a timely basis so that appropriate decisions can be made regarding public disclosure. An evaluation of the effectiveness of the design and operation of the Company’s disclosure controls and procedures was conducted as of October 31, 2007 by and under the supervision of the Company’s management, including the CEO and the CFO. Based on this evaluation, the CEO and the CFO have concluded that the Company’s disclosure controls and procedures (as defined in Multilateral Instrument 52-109 – Certification of Disclosure in Issuers’ Annual and Interim Filings of the Canadian Securities Administrators) are effective to ensure that the information required to be disclosed in reports that the Company files or submits under Canadian securities legislation is recorded, processed, summarized and reported within the time periods specified in such legislation. Under the supervision of the CEO and CFO, the Company has designed internal controls over financial reporting to provide reasonable assurance regarding the reliability of financial reporting and the preparation of financial statements for external purposes in accordance with GAAP. This design evaluation included documentation activities, management inquiries and other reviews as deemed appropriate by management in consideration of the size and nature of the Company’s business. There were no changes in the Company’s internal controls over financial reporting during the most recent interim period that have materially affected, or are reasonably likely to materially affect, its internal control over financial reporting. Patheon Inc. 2007 Annual Report 39 Five-Year Financial Summary Five-Year Financial Summary Years ended October 31 (in thousands of U.S. dollars, except share information, per-share amounts and percentages) REVENUES AND NET EARNINGS (LOSS) Revenues EBITDA before repositioning expenses (1) (% of revenues) Repositioning expenses Asset impairment charge Depreciation, amortization, and write off of deferred financing costs Gain on sale of land Interest, debt prepayment charges, refinancing expenses and foreign exchange loss on foreign operations Provision for income taxes Earnings (loss) from continuing operations (% of revenues) Earnings (loss) from discontinued operations Net earnings (loss) for the year Earnings (loss) per share – diluted From continuing operations From discontinued operations Number of shares (000s) Outstanding at October 31 Weighted average for the year – basic FINANCIAL POSITION Current assets Current liabilities Working capital Total assets Book value per share at year end (2) Interest-bearing debt (3) Shareholders’ equity Return on shareholders’ equity (4) Interest-bearing debt to shareholders’ equity Total capitalization (5) Interest-bearing debt to total capitalization CASH FLOW Cash provided by operating activities of continuing operations Cash provided by operating activities Additions to capital assets from continuing operations – sustaining – project-related Total additions to capital assets from continuing operations Total additions to capital assets Acquisitions Net proceeds from equity issues 2007 $ 2006 $ 2005 $ 2004 $ 2003 $ 677,074 90,318 13.3% 15,800 48,580 674,659 70,876 10.5% 12,998 254,661 658,856 94,008 14.3% – – 432,937 49,807 11.5% 4,407 – 360,025 45,276 12.6% – – 47,666 – 57,913 – 50,385 (4,587) 21,813 – 15,451 – 43,496 19,234 (84,458) –12.5% (10,143) (94,601) ($1.02) ($0.91) ($0.11) 22,976 11,047 (288,719) –42.8% 569 (288,150) ($ 3.10) ($ 3.11) $0.01 16,449 12,068 19,693 3.0% 1,928 21,621 $0.25 $0.23 $0.02 5,609 8,440 9,538 2.2% 1,140 10,678 $0.21 $0.19 $0.02 4,508 8,993 16,324 4.5% 2,254 18,578 $0.36 $0.32 $0.04 90,625 92,834 92,951 92,868 92,846 86,828 51,556 51,521 51,506 51,384 272,277 191,705 80,572 829,617 $2.00 363,689 197,185 –42.2% 184.4% 560,874 64.8% 255,441 431,206 (175,765) 826,183 $2.70 349,617 250,731 –72.9% 139.4% 600,348 58.2% 251,034 160,434 90,600 1,051,568 $5.81 302,898 539,851 5.4% 56.1% 842,749 35.9% 165,491 138,167 27,324 522,583 $4.29 145,792 221,398 5.2% 65.9% 367,190 39.7% 149,258 110,913 38,345 436,860 $3.77 114,626 193,923 11.4% 59.1% 308,549 37.2% 8,486 11,591 48,018 52,230 70,832 77,166 42,587 40,419 27,982 35,307 18,034 17,768 16,975 49,617 15,135 39,511 10,457 50,709 13,554 38,987 35,802 36,077 – – 66,592 67,499 – – 54,646 56,792 211,823 190,261 61,166 62,604 – – 52,541 53,669 28,220 – (1) EBITDA before repositioning expenses represents earnings from continuing operations before repositioning expenses, asset impairment charges, depreciation and amortization, foreign exchange loss on foreign operations reclassified from other comprehensive income, interest, refinancing expenses, write-off of deferred financing costs and income taxes. (2) Book value per share is defined as shareholders’ equity, excluding the equity component of the convertible preferred shares, divided by the number of restricted voting shares outstanding at year end. (3) Interest-bearing debt includes the debt component of the convertible preferred shares. (4) Ratio of net earnings (loss) to the average shareholders’ equity during the fiscal year, adjusted for the effect of share proceeds received during the year. (5) Total capitalization is the sum of interest-bearing debt and shareholders’ equity. 40 Patheon Inc. 2007 Annual Report Five-Year Summary of Quarterly Results Five-Year Summary of Quarterly Results (in thousands of U.S. dollars except per-share amounts) Q1 $ Q2 $ Q3 $ Q4 $ Year $ Revenues FY03 FY04 FY05 FY06 FY07 66,140 99,946 143,119 150,013 162,808 91,010 113,061 171,934 180,157 171,966 100,271 108,134 168,289 178,739 175,508 102,604 111,796 175,514 165,750 166,792 360,025 432,937 658,856 674,659 677,074 EBITDA before repositioning expenses FY03 FY04 FY05 FY06 FY07 6,357 10,744 20,323 13,880 22,793 9,795 11,700 22,543 23,244 23,153 14,721 13,240 25,394 14,990 23,138 14,403 14,123 25,748 18,762 21,234 45,276 49,807 94,008 70,876 90,318 Earnings (loss) from continuing operations FY03 FY04 FY05 FY06 FY07 2,136 2,622 5,352 (11,408) (2,188) 3,415 2,687 2,799 2,549 (22,552) 5,767 2,206 3,341 (257,698) (50,668) 5,006 2,023 8,201 (22,162) (9,050) 16,324 9,538 19,693 (288,719) (84,458) Net earnings (loss) FY03 FY04 FY05 FY06 FY07 3,080 2,589 6,004 (11,510) (2,024) 4,791 3,102 3,783 2,989 (21,986) 6,097 1,990 3,455 (257,213) (63,069) 4,610 2,997 8,379 (22,416) (7,522) 18,578 10,678 21,621 (288,150) (94,601) Diluted EPS – continuing operations (US¢) FY03 FY04 FY05 FY06 FY07 4.1 5.1 7.8 (12.3) (2.4) 6.5 5.1 2.4 2.7 (24.3) 11.1 4.3 3.3 (277.5) (54.4) 9.6 3.9 9.1 (23.8) (9.9) 31.3 18.4 22.6 (310.9) (91.0) Diluted EPS (US¢) FY03 FY04 FY05 FY06 FY07 5.9 5.0 8.7 (12.4) (2.2) 9.2 5.9 3.4 3.2 (23.6) 11.7 3.9 3.4 (277.0) (67.9) 8.8 5.8 9.3 (24.1) (8.2) 35.6 20.6 24.8 (310.3) (101.9) Patheon Inc. 2007 Annual Report 41 Report of Management’s Accountability and Auditors’ Report Report of Management’s Accountability The accompanying consolidated financial statements have been prepared by management in accordance with Canadian generally accepted accounting principles. Management is responsible for ensuring that these statements, which include amounts based upon estimates and judgment, reflect the Company’s business transactions and financial position. The integrity and reliability of Patheon’s reporting systems are achieved through the use of formal policies and procedures, the careful selection of employees, and appropriate delegation of authority and division of responsibilities. Patheon’s Code of Business Conduct requires employees to maintain high standards in their conduct of the Company’s affairs. Our shareholders’ independent auditors, Ernst & Young LLP, whose report on their examination follows, have audited the consolidated financial statements in accordance with Canadian generally accepted auditing standards. The Board of Directors annually appoints an Audit Committee comprised of directors who are not employees of the Company. This Committee meets regularly with management and the shareholders’ auditors to review significant accounting, reporting and internal control matters. The shareholders’ auditors have full and unrestricted access to the Audit Committee to discuss their audit and related findings. Following its review of the consolidated financial statements and the report of the shareholders’ auditors, the Audit Committee submits its report to the Board of Directors for formal approval of the consolidated financial statements. (signed) (signed) Wesley Wheeler Chief Executive Officer John Bell Chief Financial Officer Toronto, Canada January 21, 2008 Auditors’ Report To the Shareholders of Patheon Inc. We have audited the consolidated balance sheets of Patheon Inc. as at October 31, 2007 and 2006 and the consolidated statements of loss, changes in shareholders’ equity, comprehensive loss and cash flows for the years then ended. These financial statements are the responsibility of the Company’s management. Our responsibility is to express an opinion on these financial statements based on our audits. We conducted our audits in accordance with Canadian generally accepted auditing standards. Those standards require that we plan and perform an audit to obtain reasonable assurance whether the financial statements are free of material misstatement. An audit includes examining, on a test basis, evidence supporting the amounts and disclosures in the financial statements. An audit also includes assessing the accounting principles used and significant estimates made by management, as well as evaluating the overall financial statement presentation. In our opinion, these consolidated financial statements present fairly, in all material respects, the financial position of the Company as at October 31, 2007 and 2006 and the results of its operations and its cash flows for the years then ended in accordance with Canadian generally accepted accounting principles. (signed) Ernst & Young LLP Chartered Accountants Licensed Public Accountants Toronto, Canada January 21, 2008 42 Patheon Inc. 2007 Annual Report Audited Consolidated Financial Statements Consolidated Balance Sheets (in thousands of U.S. dollars) As at October 31 2007 $ 2006 $ ASSETS Current Cash and cash equivalents (note 5) Accounts receivable Inventories (note 6) Prepaid expenses and other Assets held for sale (note 3) 30,557 130,801 88,729 12,347 9,843 50,723 117,705 72,057 6,615 8,341 Total current assets 272,277 255,441 Capital assets (note 7) Intangible assets (note 8) Deferred costs (note 9) Future tax assets (note 18) Goodwill (note 10) Investments Assets held for sale (note 3) 487,423 8,718 8,878 31,055 3,658 946 16,662 467,365 41,447 9,717 21,827 3,077 586 26,723 829,617 826,183 LIABILITIES AND SHAREHOLDERS’ EQUITY Current Bank indebtedness (note 11) Accounts payable and accrued liabilities Income taxes payable Current portion of long-term debt (note 12) Liabilities related to assets held for sale (note 3) 8,224 163,721 4,684 11,902 3,174 3,829 140,254 879 283,717 2,527 Total current liabilities 191,705 431,206 Long-term debt (note 12) Deferred revenues Future tax liabilities (note 18) Convertible preferred shares – debt component (note 13) Other long-term liabilities (note 14) Liabilities related to assets held for sale (note 3) 203,647 25,994 47,578 139,916 22,069 1,523 62,071 23,366 33,128 — 24,265 1,416 Total liabilities 632,432 575,452 Shareholders’ equity Convertible preferred shares – equity component (note 16) Restricted voting shares (note 16) Contributed surplus Deficit Accumulated other comprehensive income 15,925 391,967 4,049 (286,250) 71,494 — 400,721 3,829 (189,900) 36,081 Total shareholders’ equity 197,185 250,731 829,617 826,183 See accompanying notes. On behalf of the Board: (signed) (signed) Peter A.W. Green Director Gregory C. Wilkins Director Patheon Inc. 2007 Annual Report 43 Audited Consolidated Financial Statements Consolidated Statements of Loss (in thousands of U.S. dollars, except earnings (loss) per share) Years ended October 31 2007 $ 2006 $ Revenues (note 19) 677,074 674,659 Operating expenses Foreign exchange gain on debt (note 17) Repositioning expenses (note 22) Asset impairment charge (note 4) Depreciation and amortization Amortization of intangible assets Foreign exchange loss on foreign operations (note 17) Interest Refinancing expenses (note 23) Amortization of deferred financing costs Write-off of deferred financing costs (note 23) 599,087 (12,331) 15,800 48,580 40,979 6,687 858 29,167 13,471 — — 603,783 — 12,998 254,661 38,766 11,871 — 21,333 1,643 944 6,332 Loss from continuing operations before income taxes (65,224) (277,672) Provision for (recovery of) income taxes (note 18) Current Future 14,617 4,617 Loss from continuing operations 19,234 (84,458) 11,047 (288,719) Earnings (loss) from discontinued operations (note 3) (10,143) Net loss for the year (94,601) (288,150) Basic and diluted earnings (loss) per share From continuing operations From discontinued operations ($0.91) ($0.11) ($3.11) $0.01 ($1.02) 92,834 ($3.10) 92,868 Average number of shares outstanding during the year – basic and diluted (in thousands) See accompanying notes. 44 17,725 (6,678) Patheon Inc. 2007 Annual Report 569 Audited Consolidated Financial Statements Consolidated Statements of Changes in Shareholders’ Equity (in thousands of U.S. dollars) Years ended October 31 2007 $ 2006 $ Convertible preferred shares – equity component (note 16) Shares issued during the year, net of issue costs 15,925 — Balance at end of year 15,925 — Restricted voting shares (note 16) Balance at beginning of year Issued during the year, net of issue costs Repurchased during the year, net of transaction costs 400,721 24 (8,778) 400,594 127 — Balance at end of year 391,967 400,721 Contributed surplus Balance at beginning of year Stock options 3,829 220 2,901 928 Balance at end of year 4,049 3,829 Retained earnings (deficit) Balance at beginning of year Adjustment related to change in accounting policy (note 2) Net loss for the year (189,900) (1,749) (94,601) 98,250 — (288,150) Balance at end of year (286,250) (189,900) Accumulated other comprehensive income Balance at beginning of year Transition adjustment (note 2) Other comprehensive income (loss) for the year 36,081 (762) 36,175 38,106 — (2,025) Balance at end of year 71,494 36,081 Total shareholders’ equity 197,185 250,731 See accompanying notes. Patheon Inc. 2007 Annual Report 45 Audited Consolidated Financial Statements Consolidated Statements of Comprehensive Loss (in thousands of U.S. dollars) Years ended October 31 Net loss for the year (94,601) 30,787 2,793 3,723 — — (1,128) — Other comprehensive income (loss), net of income taxes Change in foreign currency gains on investments in subsidiaries, net of hedging activities (1) Foreign currency losses on investments in subsidiaries, net of hedging activities reclassified to consolidated statement of loss (2) Change in value of derivatives designated as foreign currency and interest rate cash flow hedges (3) Gains on foreign currency and interest rate cash flow hedges reclassified to consolidated statement of loss (4) Other comprehensive income (loss) for the year 36,175 Comprehensive loss for the year (58,426) See accompanying notes. The amounts disclosed in other comprehensive income have been recorded net of income taxes as follows: (1) Net of an income tax expense of nil (2006 – $nil). (2) Net of an income tax recovery of $1,935,000. (3) Net of an income tax recovery of $373,000. (4) Net of an income tax recovery of $343,000. 46 2007 $ Patheon Inc. 2007 Annual Report 2006 $ (288,150) (2,025) (2,025) (290,175) Audited Consolidated Financial Statements Consolidated Statements of Cash Flows (in thousands of U.S. dollars) Years ended October 31 (84,458) (288,719) 48,580 47,666 858 (12,331) 7,054 — 1,657 (4,846) 4,617 (2,021) 2,087 254,661 50,637 — — — 6,332 944 1,112 (6,678) (1,978) 1,587 Net change in non-cash working capital balances related to continuing operations (note 17) Increase in deferred revenues 8,863 17,898 (2,442) 2,065 20,506 9,614 Cash provided by operating activities of continuing operations Cash provided by operating activities of discontinued operations 8,486 3,105 48,018 4,212 Cash provided by operating activities 11,591 52,230 INVESTING ACTIVITIES Additions to capital assets Net increase in investments Increase in deferred pre-operating costs (35,802) (202) (3,659) (66,592) (49) (2,204) Cash used in investing activities of continuing operations Cash used in investing activities of discontinued operations (39,663) (275) (68,845) (907) Cash used in investing activities (39,938) (69,752) FINANCING ACTIVITIES Increase (decrease) in bank indebtedness Increase in long-term debt Repayment of long-term debt Issue of convertible preferred shares (note 13 and note 16) Convertible preferred share issue costs – equity component (note 16) Issue of restricted voting shares (note 16) Repurchase of restricted voting shares (note 16) Decrease in restricted cash Increase in deferred financing costs 3,532 198,108 (337,452) 150,000 (1,213) 24 (8,778) — — (11,096) 416,389 (364,800) — — 127 — 7,805 (3,965) Cash provided by financing activities Effect of exchange rate changes on cash and cash equivalents 3,960 1,278 Net increase (decrease) in cash and cash equivalents during the year Cash and cash equivalents, beginning of year (20,166) 50,723 28,216 22,507 Cash and cash equivalents, end of year 30,557 50,723 Supplemental cash flow information Interest paid Income taxes paid 22,183 9,600 22,573 11,460 OPERATING ACTIVITIES Net loss from continuing operations Add (deduct) charges to operations not requiring a current cash payment Asset impairment charge (note 4) Depreciation and amortization Foreign exchange loss on foreign operations (note 17) Foreign exchange gain on debt Accreted interest on convertible preferred shares (note 13) Write-off of deferred financing costs (note 23) Other non-cash interest Employee future benefits, net of contributions Future income taxes Amortization of deferred revenues Other 2007 $ 4,221 2006 $ 44,460 See accompanying notes. Patheon Inc. 2007 Annual Report 47 Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Notes to Consolidated Financial Statements Note 1 Nature of Business Patheon Inc. (“Patheon” or the “Company”) is a Canadian public company, which trades under the symbol PTI on The Toronto Stock Exchange (“TSX”). The Company is an independent provider of commercial manufacturing and pharmaceutical development services of prescription (“Rx”) and over-the-counter (“OTC”) drugs to the international pharmaceutical industry. Patheon’s commercial manufacturing activities relate primarily to Rx and OTC products in solid, semi-solid, liquid and sterile dosage forms. The Company manufactures to client specifications a wide variety of products in many packaging formats. The Company can be responsible for each aspect of the manufacturing and packaging process, from sourcing raw materials and packaging components to delivering the finished product in consumer-ready form to the client’s distribution facilities. Patheon’s pharmaceutical development services include dosage form development, analytical methods development, pilot batch manufacture of new products for the regulatory drug approval process and the provision of scale-up services designed to show that a drug can be manufactured in commercial volumes. Note 2 Summary of Significant Accounting Policies The consolidated financial statements of the Company have been prepared by management in accordance with Canadian generally accepted accounting principles. The significant accounting policies followed by the Company are summarized as follows: Principles of Consolidation These consolidated financial statements include the accounts of the Company and its subsidiaries. All intercompany transactions have been eliminated. Use of Estimates in the Preparation of the Consolidated Financial Statements The preparation of the consolidated financial statements in conformity with Canadian generally accepted accounting principles requires management to make estimates and assumptions that affect: the reported amounts of assets and liabilities; the disclosure of contingent assets and liabilities at the date of the consolidated financial statements; and the reported amounts of revenue and expenses in the reporting period. Management believes that the estimates and assumptions used in preparing its consolidated financial statements are reasonable and prudent; however, actual results could differ from those estimates. Changes in Accounting Policy The Company adopted the CICA Handbook Section 3855, Financial Instruments – Recognition and Measurement; Section 3861, Financial Instruments – Disclosure and Presentation; Section 3865, Hedges; Section 1530, Comprehensive Income; and Section 3251, Equity on November 1, 2006. The adoption of the new standards resulted in changes in accounting for financial instruments and hedges as well as the recognition of certain transition adjustments that have been recorded in the deficit account and in accumulated other comprehensive income. The comparative consolidated financial statements have not been restated as a result of the adoption of the standards, except as noted below. The principal changes in the accounting for financial instruments and hedges due to the adoption of these accounting standards are described below. (a) Financial Assets and Financial Liabilities Under the new standards, all financial instruments are classified into one of the following five categories: held-for-trading, held to maturity investments, loans and receivables, available-for-sale financial assets and other financial liabilities. All financial instruments, including derivatives, are included in the consolidated balance sheet and are measured at fair value except for held to maturity investments, loans and receivables and other financial liabilities, which are measured at amortized cost. Held-for-trading financial instruments are recorded at cost as they are initiated and are subsequently measured at fair value and all revaluation gains and losses are included in net earnings (loss) in the period in which they arise. Available-for-sale financial instruments are also recorded at cost and are subsequently measured at fair value with all revaluation gains and losses included in other comprehensive income. On transition to the new standards, gains from the cancellation of interest rate swaps that had previously been deferred, were recognized in accumulated other comprehensive income. In addition, an investment in shares of a publicly traded company was designated as held-for-trading. Prior to the adoption of the new standards, this investment had been accounted for on a cost basis, as adjusted for an other than temporary decline in value. All other financial assets are accounted for on an amortized cost basis and financial liabilities are accounted for on an accruals basis, consistent with prior accounting policies. 48 Patheon Inc. 2007 Annual Report Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) In connection with the adoption of the new standards, the Company changed its accounting policy relating to costs of obtaining bank and other debt financing. Under the new policy all transaction costs, including fees paid to advisors and other related costs, are expensed as incurred. Financing costs, including underwriting and arrangement fees paid to lenders are deferred and netted against the carrying value of the related debt and amortized into interest expense using the effective interest rate method. The Company previously deferred all transaction and financing costs associated with obtaining bank and other debt financing. The Company believes that the new policy is reliable and more relevant as it results in a more transparent treatment of transaction costs that the Company has incurred in its recent refinancing activities and in the carrying value of debt. The costs of obtaining bank and other debt financing that were previously reported in deferred costs are now netted against the carrying value of the related debt and amortized into interest expense using the effective interest rate method. Prior to the adoption of the new standards, the amortization of deferred financing costs was reported as a separate line in the consolidated statement of earnings (loss) and the amortized balance disclosed in deferred costs on the consolidated balance sheet. (b) Derivatives and Hedge Accounting The Company enters into foreign currency forward contracts to reduce its exposure to foreign currency denominated cash flows and the change in the fair value of foreign denominated assets and liabilities. The Company also enters into interest rate swap contracts to reduce its exposure to variable interest rates. All derivative instruments are recorded on the consolidated balance sheet at fair value unless exempted from derivative treatment as a normal purchase and sale. All changes in their fair value are recorded in earnings (loss) unless cash flow hedge accounting is used, in which case the changes in the fair value associated with the effective portions of the hedge are recorded in other comprehensive income. Prior to the adoption of the new standards, the Company accounted for derivatives that met the requirements of hedge accounting on an accrual basis. The Company also holds foreign currency denominated debt as a hedge against the carrying value of its equity investment in certain foreign currency denominated operations. The change in the fair value of foreign denominated debt that is designated as an effective hedge of the net investments in foreign operations is recognized in other comprehensive income. The change in the fair value of foreign denominated debt that is not considered to be an effective hedge is recorded in earnings (loss). (c) Comprehensive Loss and Accumulated Other Comprehensive Income Comprehensive loss is comprised of the Company’s net loss and other comprehensive income (loss). Other comprehensive income includes foreign currency translation gains and losses on net investments in self-sustaining operations net of hedging activities and changes in the fair value of derivative instruments designated as cash flow hedges, all net of income taxes. Amounts accumulated in other comprehensive income are reclassified to the consolidated statement of loss in the period in which the hedged item affects earnings (loss). Foreign currency gains and losses on net investments in self-sustaining foreign operations, net of hedging activities, accumulated in other comprehensive income are reclassified to the consolidated statement of loss upon the repatriation, reduction or disposal of the investment in the foreign operation. (d) Impact of Changes in Accounting Policy On transition to the new accounting standards, deferred after tax gains from interest rate swaps of $656,000 and after tax losses on the fair value of cash flow hedges of $1,418,000 were recorded in accumulated other comprehensive income. Accumulated other comprehensive income also includes gains on net investments in self-sustaining foreign operations, net of hedging activities of $36,081,000 previously recorded in the cumulative translation adjustment account. As a result, the previously recorded cumulative translation adjustment account has been eliminated and the balances have been included in accumulated other comprehensive income. On transition to the new standards, the comparative amounts of other comprehensive income for the year only reflect the amounts previously recorded in the cumulative translation adjustment account. The change in policy relating to the costs of obtaining bank and other debt financing had the effect of increasing the retained deficit at November 1, 2006 by $1,749,000. Refinancing expenses for the year ended October 31, 2007 include transaction costs incurred in connection with the completion of the Company’s senior secured credit facilities and the debt component of the convertible preferred shares of $11,889,000 (note 23). Foreign Exchange Translation The assets and liabilities of the Company’s operations having a functional currency other than the U.S. dollar are translated into the Company’s U.S. dollar reporting currency using the exchange rate in effect at the year end and revenues and expenses are translated at the average rate during each month. Translation gains and losses related to the carrying value of the Company’s foreign operations and certain foreign currency denominated debt held by the Company and designated as a hedge against the carrying value of certain foreign subsidiaries, are included in accumulated other comprehensive income in shareholders’ equity. Foreign exchange gains and losses on transactions occurring in a currency different than an operation’s functional currency are reflected in earnings. Patheon Inc. 2007 Annual Report 49 Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Revenue Recognition The Company recognizes revenue for its commercial manufacturing and pharmaceutical development services when services are completed in accordance with specific agreements with its clients and when all costs connected with providing these services have been incurred, the price is fixed or determinable and collectability is reasonably assured. Client deposits on pharmaceutical development services in progress are included in accounts payable and accrued liabilities. The Company does not receive any fees on signing of contracts. In the case of pharmaceutical development services, revenue is recognized on the achievement of specific milestones in accordance with the respective development service contracts. In the case of commercial manufacturing services, revenue is recognized when services are complete and the product has met rigorous quality assurance testing. Deferred Revenues The costs of certain capital assets are reimbursed to the Company by the pharmaceutical companies that are to benefit from the improvements in connection with the manufacturing and packaging agreements in force. These reimbursements are recorded as deferred revenues and are recognized as income over the remaining minimum term of the agreements. Cash and Cash Equivalents Cash and cash equivalents include cash in interest-bearing accounts and term deposits with remaining maturities of less than three months at the date the term deposit was acquired. Inventories Inventories consisting of raw materials, packaging components, spare parts and work‑in‑process are valued at the lower of weighted average cost and net realizable value. Capital Assets Capital assets are carried at cost less accumulated depreciation and charges for impairment. The cost of assets disposed of and the related accumulated depreciation are removed from the accounts and any resulting gain or loss is reflected in earnings. Depreciation is provided on the straight-line basis based on estimated useful lives as follows: Buildings .. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Machinery and equipment . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Office equipment .. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Furniture and fixtures .. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . 40 – 50 years 5 – 15 years 4 – 10 years 10 years Repairs and maintenance costs are charged to operations as incurred. Intangible Assets Intangible assets represent the values assigned to acquired client contracts and relationships. They are amortized on a straight-line basis over their estimated economic lives. Impairment of Long-Lived Depreciable Assets The Company reviews whether there are any indicators of impairment of its capital assets and identifiable intangible assets (“longlived depreciable assets”). If such indicators are present, the Company assesses the recoverability of the assets or group of assets by determining whether the carrying value of such assets can be recovered through undiscounted future cash flows. If the sum of undiscounted future cash flows is less than the carrying amount, the excess of the carrying amount over the estimated fair value, based on discounted future cash flows, is recorded as a charge to earnings. Deferred Costs Deferred costs consists of deferred pre-operating costs. During the development and pre-operating phases of new businesses or facilities, incremental costs are deferred. Once commercial operations have commenced, the costs are amortized on a straight-line basis over five years. Grants under available government assistance programs, relating to these costs, are reflected as a reduction of amounts deferred. Prior to the adoption of CICA Handbook Section 3855 “Financial Instrument – Recognition and Measurement” (please refer to the ‘Changes in Accounting Policy’ section), the costs of obtaining bank and other debt financing were deferred and amortized on a straight-line basis over the term of the debt to which they related. 50 Patheon Inc. 2007 Annual Report Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Goodwill Goodwill represents the excess of the purchase price of the Company’s interest in subsidiary companies over the fair value of the underlying net identifiable assets arising on acquisitions. Goodwill is not subject to amortization but is subject to an annual review for impairment, or more frequently if events or changes in circumstances indicate that goodwill is impaired. Goodwill impairment is assessed based on a comparison of the fair value of an individual reporting unit to the underlying carrying value of the reporting unit’s net assets including goodwill. When the carrying amount of the reporting unit exceeds its fair value, the fair value of the reporting unit’s goodwill, determined in the same manner as in a business combination, is compared with its carrying amount to measure the amount of the impairment loss, if any. Employee Benefit Plans The Company provides a number of benefit plans to its employees including: (a) defined benefit pension plans; (b) post-employment benefit plans; (c) defined contribution pension plans; and (d) unfunded termination indemnities. The cost of defined benefit pension plans and other post-employment benefits, which include health care and dental benefits, related to employees’ current service is charged to earnings annually. The cost is computed on an actuarial basis using the projected benefit method pro-rated on service and management’s best estimates of various actuarial factors, including salary escalation, other cost escalation and retirement ages of employees. The valuation of defined benefit pension plan assets is at current market value, based on actuarial valuation, for purposes of calculating the expected return on plan assets. Past service costs resulting from plan amendments are deferred and amortized on a straight-line basis over the remaining service life of employees active at the time of amendment. Actuarial gains and losses arise from the difference between the actual long-term rate of return on plan assets for a period and the expected long-term rate of return on plan assets for that period, or from changes in actuarial assumptions used to determine the accrued benefit obligation. The excess of the net accumulated actuarial gain or loss over 10% of the greater of the benefit obligations and the fair value of plan assets is amortized over the average remaining service period of active employees. The average remaining service period of the active employees covered by the pension plans and the other retirement benefit plans at the measurement date of October 31, 2007 is 19 years (2006 – 11.8 years). The cost of defined contribution pension plans is charged to earnings as funds are contributed by the Company. Unfunded termination indemnities for the employees of the Company’s subsidiary in Italy are accrued based on Italian severance pay statutes. The liability recorded on the consolidated balance sheets is the amount to which the employees would be entitled if the employees’ employment with the Company ceased. Income Taxes The Company follows the liability method of income tax allocation. Under this method, future tax assets and liabilities are determined based on differences between the financial reporting and tax bases of assets and liabilities and are measured using the substantively enacted tax rates and laws that will be in effect when the differences are expected to reverse. The Company evaluates, on a quarterly basis, the ability to realize its future tax assets. The factors used to assess the likelihood of realization are the Company’s forecast of future taxable income and available tax planning strategies that could be implemented to realize the future tax assets. Convertible Preferred Shares The Company’s convertible preferred shares are considered to be a compound financial instrument that contains both a debt component and an equity component. On issuance of the convertible preferred shares, the fair value of the debt component is determined by discounting the expected future cash flows over the expected life using a market interest rate for a non-convertible debt instrument with similar terms. The value is carried as debt on an amortized cost basis until extinguished on conversion or redemption. The remainder of the proceeds are allocated as a separate component of shareholders’ equity, net of transaction costs. Transaction costs are apportioned between the debt and equity components based on their respective carrying amounts when the instrument was issued. On conversion, the carrying amount of the debt component and the equity component are transferred to share capital and no gain or loss is recognized. The interest cost recognized in respect of the debt component represents the accretion of the liability, over its expected life using the effective interest method, to the amount that would be payable if redeemed. Patheon Inc. 2007 Annual Report 51 Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Stock Options The fair value of stock options granted, modified or settled on or after November 1, 2003 is recognized on a straight-line basis over the applicable stock option vesting period as stock-based compensation expense in the consolidated statements of earnings (loss) and contributed surplus in the consolidated balance sheets. On the exercise of stock options, consideration received and the accumulated contributed surplus amount is credited to share capital. For the purposes of calculating the stock-based compensation expense, the fair value of stock options is estimated at the date of the grant using the Black-Scholes option pricing model and the cost is amortized over the vesting period. This model requires the input of a number of assumptions including dividend yields, expected stock price volatility, expected time until exercise and risk-free interest rates. Although the assumptions used reflect management’s best estimates, they involve assumptions based on market conditions generally outside of the control of the Company. Earnings (Loss) Per Share The calculation of earnings (loss) per share – from continuing and discontinued operations is based on the reported net earnings (loss) – from continuing and discontinued operations divided by the weighted average number of restricted voting shares outstanding during the year. Diluted earnings per share reflect the assumed conversion of all dilutive securities using the treasury stock method. Under the treasury stock method: 3 the exercise of options is assumed to be at the beginning of the period (or at the time of issuance, if later); 3 options for which the closing fair market value exceeds the option price are the only ones that are assumed to be dilutive; 3 the proceeds from the exercise of options, plus future period compensation expense on options granted on or after November 1, 2003, are assumed to be used to purchase restricted voting shares at the average price during the period; 3 the number of restricted voting shares assumed to be dilutive, plus the weighted average number of restricted voting shares outstanding during the year, is used in the denominator of the diluted earnings per share computation; 3 the convertible preferred shares are assumed to have been converted at the beginning of the period (or at time of issuance, if later), and the resulting restricted voting shares are included in the denominator; and 3 any expenses applicable to convertible preferred shares are added back to the numerator, net of income taxes. Since the Company was in a loss position for the years ended October 31, 2007 and 2006, there is no dilutive effect. Government Financing The Company makes periodic applications for financial assistance under available government assistance programs in the various jurisdictions in which the Company operates. Grants relating to capital expenditures are reflected as a reduction of the cost of the related assets. Grants and tax credits relating to current operating expenditures are generally recorded as a reduction of expenses at the time the eligible expenses are incurred. In the case of certain foreign subsidiaries, the Company receives investment incentive allowances, which are accounted for as a reduction of income tax expense. Recently Issued Accounting Pronouncements Capital Disclosures The CICA issued a new accounting standard, Section 1535, Capital Disclosures, which requires the disclosure of both qualitative and quantitative information that enables users of financial statements to evaluate the entity’s objectives, policies and processes for managing capital. The Company will adopt this standard beginning November 1, 2007 and is currently evaluating the effect of adopting this standard. Financial Instruments The CICA issued two new accounting standards, Section 3862, Financial Instruments – Disclosures, and Section 3863, Financial Instruments – Presentation, which apply to interim and annual financial statements relating to fiscal years beginning on or after October 1, 2007. These new standards revise and enhance the disclosure requirements, and carry forward, substantially unchanged, the presentation requirements. These new standards emphasize the significance of financial instruments to the entity’s financial position and performance, the nature and extent of risks arising from financial instruments, and how these risks are managed. The Company will adopt this standard beginning November 1, 2007 and is currently evaluating the effect of adopting this standard. 52 Patheon Inc. 2007 Annual Report Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Inventories The CICA issued a new accounting standard, Section 3031, “Inventories,” which requires inventory to be measured at the lower of cost and net realizable value. The standard provides guidance on the types of costs that can be capitalized and requires the reversal of previous inventory write-downs if economic circumstances have changed to support higher inventory values. The Company will adopt this standard beginning November 1, 2008 and is currently evaluating the effect of adopting this standard. International Financial Reporting Standards The CICA plans to converge Canadian GAAP with International Financial Reporting Standards (“IFRS”) over a transition period expected to end in 2011. Management is reviewing the transition to IFRS on the Company’s consolidated financial statements and has not yet determined the impact. Note 3 Discontinued Operations and Assets Held for Sale On April 17, 2007, the Company announced that as part of its strategy to focus on developing and manufacturing prescription pharmaceutical products and to improve the Company’s profitability, it plans to restructure its current network of six pharmaceutical manufacturing facilities in Canada. In connection with this initiative, on December 6, 2007 the Company announced that it had entered into a definitive agreement to sell its Niagara-Burlington operations focused on the manufacturing of OTC products to Pharmetics Inc. Please refer to note 25 – “Subsequent Events” for additional information regarding this transaction. The Company also plans to close its York Mills, Toronto facility and transfer substantially all commercial production and development services to its site in Whitby and sell the land and buildings. The process of transferring production to other facilities is expected to be completed by the first half of fiscal 2009. The results of the Niagara-Burlington operations have been reported as discontinued operations and prior period amounts have been reclassified to conform to the current period presentation. During 2007 the Company recorded an impairment charge of $12,465,000 to write down the carrying value of Niagara-Burlington operation’s long-lived assets to their fair value less estimated disposition costs. The results of discontinued operations for the year ended October 31, 2007 and 2006 are as follows: 2007 $ 2006 $ Revenues 35,244 37,493 Operating expenses Repositioning expenses (recovery) Asset impairment charge Depreciation and amortization 32,475 (397) 12,465 844 34,580 789 — 1,112 Earnings (loss) before income taxes Provision for income taxes (10,143) — 1,012 443 Net earnings (loss) for the year (10,143) 569 Assets held for sale and the related liabilities include the Niagara-Burlington Operations and the land and buildings at York Mills. In accordance with Section 3475 of the CICA Handbook, long-lived assets held for sale are measured at the lower of their carrying amount or fair value less cost to sell. Assets held for sale and the related liabilities, as at October 31, 2007 and 2006, are as follows: 2007 $ 2006 $ Current assets Accounts receivable Inventories Prepaid expenses and other 4,376 5,307 160 4,251 3,905 185 Total current assets 9,843 8,341 Capital assets Current liabilities Accounts payable and accrued liabilities Other long-term liabilities 16,662 26,723 3,174 1,523 2,527 1,416 Patheon Inc. 2007 Annual Report 53 Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Note 4 Asset Impairment Charge During 2007, it was determined that the carrying value of the intangible assets and depreciable tangible capital assets (collectively the “long-lived depreciable assets”) at the Company’s operations in Carolina, Puerto Rico were impaired as a result of volume declines arising from the genericization of Omnicef, this being the largest single product that is manufactured at the facility. The Company tested the recoverability of the long-lived depreciable assets at the Carolina operations and determined that the expected future cash flows over the economic life of the principal assets were less than the carrying value of the long-lived depreciable assets. As a result, the Company recorded an impairment charge of $48,580,000; $26,042,000 for intangible assets and $22,538,000 for tangible capital assets. The fair value of the intangible assets was determined using a discounted cash flow methodology and the fair value of the tangible capital assets was based on a weighted average continued use and liquidation value. During 2006, the Company determined that the carrying value of long-lived depreciable assets at the Company’s operations in Caguas and Manati, Puerto Rico and the goodwill associated with all the Puerto Rico operations were impaired as a result of certain events which occurred during 2006. These events included: continued deterioration in revenues culminating in a significant increase in losses reported by the Puerto Rico operations in the third quarter; suspension of production of a major product due to concerns over product shelf life; the risk of a decline in revenue of another major product as a result of the approval by the U.S. Food and Drug Administration of a generic version of the product; and the completion of a long-range plan that showed a significant reduction in earnings relative to prior forecasts. The Company tested the recoverability of the long-lived depreciable assets for all of the Puerto Rico operations and determined that, in Caguas and Manati, the expected future cash flows over the economic life of the principal assets were less than the carrying value of the long-lived depreciable assets. As a result the Company recorded an impairment charge of $81,428,000; $51,921,000 for intangible assets and $29,507,000 for tangible capital assets. The fair value of the intangible assets was determined using a discounted cash flow methodology and the fair value of tangible capital assets was based on a value in continued use, taking into account utilization levels. The Company tested the recoverability of the goodwill associated with the Puerto Rico operations using a discounted cash flow methodology, and recorded an impairment charge of $172,477,000 representing the full value of the Puerto Rico goodwill. During 2006, the Company, as part of its ongoing review of long-term investments, concluded that its investment in the shares of a drug technology company which was accounted for on the cost basis had an other than temporary decline and wrote down its value by $756,000 to its market value. A summary of the asset impairment charges for the years ended October 31, 2007 and 2006 is as follows: 2007 $ 2006 $ Intangible asset impairment Tangible capital asset impairment Goodwill impairment Other investment impairment 26,042 22,538 — — 51,921 29,507 172,477 756 48,580 254,661 2007 $ 2006 $ Interest-bearing balances with banks, with interest rates between 1% to 5% Term deposits 30,557 — 18,899 31,824 Balance, end of the year 30,557 50,723 2007 $ 2006 $ Raw materials and packaging components Work-in-process 63,154 25,575 44,771 27,286 Balance, end of the year 88,729 72,057 Note 5 Cash and Cash Equivalents Note 6 Inventories 54 Patheon Inc. 2007 Annual Report Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Note 7 Capital Assets 2007 Net Accumulated Book Accumulated Cost DepreciationValue Cost Depreciation $ $ $ $ $ 2006 Net Book Value $ Land Buildings Machinery and equipment Office equipment Furniture and fixtures Construction in progress 42,578 230,939 401,880 43,412 16,400 24,545 — 46,193 176,725 41,093 8,320 — 42,578 184,746 225,155 2,319 8,080 24,545 40,662 232,050 337,938 31,089 18,100 50,627 — 62,207 144,854 24,438 11,602 — 40,662 169,843 193,084 6,651 6,498 50,627 Balance, end of the year 759,754 272,331 487,423 710,466 243,101 467,365 The amount required to complete authorized capital projects at October 31, 2007 is approximately $15,804,000 (2006 – $17,664,000). The expenditures are expected to be incurred during the year ending October 31, 2008. Included in capital assets are assets under capital leases with a cost of $16,642,000 at October 31, 2007 (2006 – $17,758,000). The depreciation of assets under capital leases of $5,411,000 (2006 – $5,765,000) is included in accumulated depreciation at October 31, 2007. Note 8 Intangible Assets 2007 $ 2006 $ Balance, beginning of the year Amortization Impairment (note 4) Foreign currency impact on intangible assets 41,447 (6,687) (26,042) — 110,095 (11,871) (51,921) (4,856) Balance, end of the year 8,718 41,447 2007 $ 2006 $ Pre-operating costs Financing costs 8,878 — 6,512 3,205 Balance, end of the year 8,878 9,717 Note 9 Deferred Costs As a result of changes in the Company’s accounting policies, all deferred financing costs are now netted against the carrying value of the related debt. Please refer to note 2 – “Summary of Significant Accounting Policies”. Note 10 Goodwill 2007 $ 2006 $ Balance, beginning of the year Acquisition Impairment (note 4) Foreign currency impact on goodwill 3,077 — — 581 180,665 2,316 (172,477) (7,427) Balance, end of the year 3,658 3,077 Patheon Inc. 2007 Annual Report 55 Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Note 11 Bank Indebtedness 2007 $ 2006 $ Italian short-term operating credit facilities totaling €d19,200,000 (2006 –€ d19,200,000), bearing interest at 3-month Euribor plus spreads between 0.5% and 1.25%. Certain of the short-term credit facilities are collateralized by accounts receivable. Amounts utilized at October 31, 2007 were €d4,000,000; (2006 – €d3,000,000). Short-term insurance premium financing 5,794 2,430 3,829 — Balance, end of the year 8,224 3,829 2007 $ 2006 $ 149,250 — 2,500 — 2,528 3,972 26,244 26,427 34,402 34,354 4,487 — 3,954 277,081 Note 12 Long-Term Debt Senior secured term loan maturing April 26, 2014, bearing interest at 7.8% based upon floating LIBOR, US or CAD prime, or federal funds effective rates, plus applicable margins. $75 million senior secured revolving loan facility maturing April 26, 2012, bearing interest at 6.4% based upon floating LIBOR, US, or CAD prime, or federal funds effective rates, plus applicable margins. U.S. obligations under capital leases bearing interest at fixed rates between 4.4% and 7.8%, maturing over various dates from 2008 to 2011. Italian mortgage (2007 – €d18,244,638; 2006 – €d20,706,000), bearing interest at 5.9% based upon floating 3-month Euribor, maturing in 2014. Italian mortgage (2007 – €d23,872,001; 2006 – €d26,917,000), bearing interest at 6.1% based upon floating 3-month Euribor maturing in 2014. Italian unsecured government loan (2007 – €d3,098,000; 2006 – €d3,098,000), bearing interest at 0.9% per annum, maturing in 2012. Various long-term debt obligations refinanced during 2007 Total long-term debt outstanding Less unamortized transaction costs Less current portion 219,411 3,862 11,902 345,788 — 283,717 Balance, end of the year 203,647 62,071 The Company is required to make quarterly installment payments of $375,000 on the senior secured term loan facility, along with additional mandatory repayments based on certain excess cash flow measures. The Company’s ability to draw on the senior secured revolving loan facility is dependent upon the Company’s inventory and trade accounts receivable levels. The senior secured term loan and the senior secured revolving loan facility contain restrictive covenants typical to such debt agreements, including restrictions on capital expenditures and the maintenance of certain financial ratios, all of which were met as at October 31, 2007. The senior secured term loan and the senior secured revolving facility are collateralized by substantially all of the assets of the Company’s operations in Canada, U.S.A., Puerto Rico and the U.K. and the Company’s investments in the shares of all other operating subsidiaries. The Company has entered into interest rate swap contracts to convert interest on the senior secured term loan from a floating rate to a fixed rate of 7.7% until March 2010. 56 Patheon Inc. 2007 Annual Report Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Estimated minimum annual repayments of long-term debt based on current exchange rates for the next five years are: $ 2008 2009 2010 2011 2012 Thereafter 11,902 10,765 10,756 10,802 12,705 162,481 Total payments 219,411 Included within the above future repayments of long-term debt are obligations under capital leases. Future minimum capital lease payments under capital leases in effect at October 31, 2007 are as follows: $ 990 690 663 654 Total payments Less capital lease minimum payments representing interest 2,997 469 2,528 2007 $ Fair value of the debt component of the convertible preferred shares upon issuance Accreted interest 132,862 7,054 Balance, end of the year 139,916 2008 2009 2010 2011 Interest on long-term debt amounted to $22,559,000 (2006 – $22,265,000). Note 13 Convertible Preferred Shares – Debt Component On April 27, 2007 JLL Partners, through its investment vehicle, JLL Patheon Holdings, LLC, purchased 150,000 units of Class I convertible preferred shares of Patheon for $150 million. The convertible preferred shares are a compound financial instrument with both a debt and equity component. On issuance, the fair value of the debt component of the preferred shares was $132,862,000. The remainder of the proceeds attributable to shareholders’ equity was $15,925,000, net of apportioned transaction costs of $1,213,000. Please refer to note 16 – “Shareholders’ Equity”. Note 14 Other Long-Term Liabilities 2007 $ 2006 $ Unfunded termination indemnities (2007 – e6,210,000; 2006 – e6,450,000) Employee future benefits (note 15) 8,995 13,074 8,228 16,037 22,069 24,265 The unfunded termination indemnities relate to the employees of the Company’s Italian subsidiary. In accordance with Italian severance pay statutes, an employee benefit is accrued for service to date and is payable when the employees’ employment with the Company ceases. The termination indemnity liability is calculated in accordance with local civil and labour laws based on each employee’s length of service, employment category and remuneration. The termination liability is adjusted annually by a cost-of-living index provided by the Italian Government. There is no vesting period or funding requirement associated with the liability. The liability recorded in the consolidated balance sheets is the amount to which the employees would be entitled if their employment with the Company ceased. The related expense for the year amounted to $2,312,000 (2006 – $1,971,000). Patheon Inc. 2007 Annual Report 57 Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Note 15 Employee Future Benefits The Company has a number of defined benefit pension plans. In addition, it has other benefit plans that provide post-retirement healthcare and dental benefits. The Company measured the accrued benefit obligation and the fair value of plan assets for accounting purposes as at October 31, 2007 for the defined benefit pension and other benefit plans. Information about the Company’s defined benefit pension and other benefit plans, in aggregate, is as follows: Defined Benefit Pension Plans 2007 $ Other Benefit Plans 2007 $ Defined Benefit Pension Plans 2006 $ Other Benefit Plans 2006 $ Change in benefit obligation Benefit obligation, beginning of the year Current service cost Interest cost Plan amendments Member contributions during the year Benefits paid Actuarial loss Curtailment gain Currency translation 65,920 4,241 3,677 – 991 (2,223) 203 – 8,432 11,196 910 543 – – (94) (1,782) (5,156) 1,192 58,365 4,999 3,221 (146) – (1,984) (2,669) – 4,134 9,030 1,202 490 – – (79) 63 – 490 Benefit obligation, end of the year 81,241 6,809 65,920 Change in plan assets Market value of plan assets, beginning of the year Actual return on plan assets Member contributions during the year Employer contributions Benefits paid Currency translation 50,149 5,885 991 5,775 (2,206) 6,717 Market value of plan assets, end of the year 67,311 Reconciliation of funded status Funded status, deficit Unamortized net actuarial loss Unamortized past service costs Accrued benefit liability – – – 94 (94) – – 11,196 38,916 4,569 – 4,852 (1,984) 3,796 – – – 79 (79) – 50,149 – (13,930) 7,206 59 (6,809) 400 – (15,771) 7,436 (142) (11,196) 3,636 – (6,665) (6,409) (8,477) (7,560) The accrued benefit liability of $13,074,000 (2006 – $16,037,000) is included in other long-term liabilities (note 14). For all of the Company’s plans, the accrued benefit obligations are in excess of plan assets as at October 31, 2007 and 2006. Defined benefit pension plan assets consist of: 2007 % 2006 % Equity securities Debt securities Other 86 9 5 88 10 2 Total 100 100 The significant actuarial assumptions adopted in measuring the Company’s accrued benefit obligation and benefit plan expense in connection with its defined benefit pension and other benefit plans is as follows (weighted average assumptions as at October 31, 2007 and 2006): 58 Patheon Inc. 2007 Annual Report Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Accrued benefit obligation Discount rate Rate of compensation increase Benefit costs recognized Discount rate Expected long-term rate of return on plan assets Rate of compensation increase Defined Benefit Pension Plans 2007 % Other Benefit Plans 2007 % Defined Benefit Pension Plans 2006 % Other Benefit Plans 2006 % 5.6 4.1 5.8 – 5.0 3.5 5.3 – 5.5 7.3 3.8 5.5 – – 5.0 7.0 3.5 5.5 – – In connection with the other benefit plans, a 4% to 12% annual rate of increase in the per capita cost of covered health care and dental benefits was assumed for 2007 (2006 – 4% to 10%). The rate was assumed to decrease gradually over the next five years to 6% and remain at that level thereafter (2006 – 6% and thereafter). The following table outlines the effects of a one-percentage-point increase and decrease in the assumed health care and dental benefit trend rates: Impact of: 1% increase 1% decrease Benefit Obligation $ Benefit Expense $ 941 (815) 116 (98) The cost components of the Company’s defined benefit pension plan and other benefit plans in aggregate are as follows: Current service cost Interest cost Actual return on plan assets Actuarial (gain) loss Elements of employee future benefit costs before adjustments to recognize the long-term nature of employee future benefits Adjustments to recognize the long-term nature of employee future benefit costs: Curtailment gains/Settlement Difference between expected return and actual return on plan assets for the year Difference between amortization of the net actuarial loss for the year and the actual actuarial loss on accrued benefit obligation for the year Difference between amortization of past service costs for the year and actual plan amendments for the year Net benefit cost recognized Defined Benefit Pension Plans 2007 $ Other Benefit Plans 2007 $ Defined Benefit Pension Plans 2006 $ Other Benefit Plans 2006 $ 4,241 3,677 (5,885) 203 910 543 – (1,782) 4,999 3,221 (4,569) (2,668) 1,202 490 – 63 2,236 (329) – (4,292) 983 1,755 (1,447) – 1,728 – 1,462 – 120 2,498 3,166 274 (209) 3,875 – (2,123) 20 – 4,184 2,029 The net benefit cost recognized for the year ended October 31, 2007, includes a curtailment gain of $4,292,000 arising from a decision to phase out certain post-employment benefits in the Company’s Canadian operations. The Company also provides retirement benefits for the majority of its employees at its Canadian, U.S. and Puerto Rican sites under defined contribution pension plans. The total expense for the plans amounted to $7,147,000 (2006 – $7,592,000). Total cash payments for employee future benefits for 2007 totaled $13,016,000 (2006 – $12,523,000), consisting of cash contributed by the Company to its defined benefit pension plans of $5,775,000 (2006 – $4,852,000), cash payments directly to beneficiaries for its other benefit plans of $94,000 (2006 – $79,000) and cash contributed to its defined contribution pension plans of $7,147,000 (2006 – $7,592,000). Patheon Inc. 2007 Annual Report 59 Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Note 16 Shareholders’ Equity Share Capital Share capital consists of the following: Authorized Unlimited Class I preferred shares – Issuable from time to time in one or more series, each series comprising the number of shares and having the designation, rights, privileges, restrictions and conditions determined by the Company’s board of directors. Unlimited restricted voting shares. Issued and outstanding 150,000 Class I preferred shares consisting of 150,000 Series C (“convertible preferred shares”) and 150,000 Series D (“special voting preferred shares”) Restricted voting shares of 90,624,388 (previously referred to as common shares); 2006 – 92,950,688 2007 $ 2006 $ 15,925 – 391,967 400,721 Convertible Preferred Shares On April 27, 2007 JLL Partners, through its investment vehicle, JLL Patheon Holdings, LLC, purchased 150,000 units of Class I convertible preferred shares of Patheon for $150 million. Each unit consists of a Class I Series C convertible preferred share and a Series D special voting preferred share. On issuance, the fair value of the debt component of the preferred shares was $132,862,000 (please refer to note 13 – “Convertible Preferred Shares – Debt Component”). The remainder of the proceeds, attributable to shareholders’ equity was $15,925,000, net of apportioned transaction costs of $1,213,000. Until October 27, 2009, no cash dividends will be paid on the preferred shares, but the liquidation preference and conversion rate will increase on a quarterly basis by 2.125%. After October 27, 2009, these increases in the liquidation preference and conversion rate will continue until the maturity or prior conversion, unless the Company elects to pay a cash dividend for any applicable quarter, in which case the Company will pay a cash dividend for such quarter based on an annual dividend rate of 8.5% on the aggregate liquidation preference of the convertible preferred shares. At October 31, 2007, each convertible preferred share is convertible into 218.7154 restricted voting shares, as adjusted for any non-cash dividends noted above, at any time at the holder’s option. The Company will be entitled to require the holder to convert into restricted voting shares if, at any time after October 27, 2009, the market price of the restricted voting shares on the Toronto Stock Exchange exceeds a price equivalent to US$7.87 for a period of at least 60 days. If not previously converted, the Company is required to redeem the convertible preferred shares for cash on April 27, 2017 at a price equal to the aggregate liquidation preference of the convertible preferred shares, plus accrued and unpaid dividends thereon. The Company is also required to redeem the convertible preferred shares upon the occurrence of a change of control of Patheon at a price equal to the greater of the aggregate liquidation preference of the convertible preferred shares, plus accrued and unpaid dividends thereon, or the price per share paid to holders of restricted voting shares in the change of control transaction, multiplied by the number of restricted voting shares into which the convertible preferred shares are then convertible. The convertible preferred shares have the right to vote, together with the holders of the restricted voting shares, on an as-if converted basis, in respect of all matters other than the election of directors. As at October 31, 2007, these voting rights represent approximately 27% of the voting rights of Patheon. The special voting preferred shares have the right to appoint up to three directors. Restricted Voting Shares The Company’s articles were amended on April 26, 2007 to re-designate the common shares as restricted voting shares. This occurred in connection with the issuance of the convertible preferred shares. The holders of the convertible preferred shares have the right to appoint three of nine members of the Board of Directors. The holders of Patheon’s restricted voting shares have the right to elect the remaining members of the Board of Directors. Under the rules of the Toronto Stock Exchange, voting equity securities are not to be designated, or called, common shares unless they have a right to vote in all circumstances that is not less, on a per share basis, than the voting rights of each other class of voting securities. Accordingly, the Company amended its articles to re-designate the common shares as restricted voting shares. This re-designation involves only a change in the name of the securities; the number of shares outstanding and the terms and conditions of the outstanding shares are not affected by the change. 60 Patheon Inc. 2007 Annual Report Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) During 2007, the Company repurchased, through a normal course issuer bid, 2,334,300 restricted voting shares at a cost of $8,778,000. During the year, the Company issued 8,000 (2006 – 105,000) restricted voting shares under the stock option plan for proceeds of $24,000 (2006 – $127,000). Shareholder Rights Plans On March 31, 2005, the shareholders approved the renewal of an amended and restated shareholder rights plan (the “Renewal Plan”) which continued the rights granted under a shareholder rights plan approved by shareholders on March 23, 1999. The Renewal Plan applies to all restricted voting shares (formerly common shares) and all future issues of restricted voting shares. The Renewal Plan is designed to encourage fair treatment of all the Company’s shareholders in the event of a take-over bid, to provide shareholders and the Board of Directors with more time to fully consider any unsolicited take-over bid for the Company, to allow the Board of Directors to pursue, if appropriate, other alternatives to enhance shareholder value, and to allow additional time for competing bids to emerge. The Renewal Plan will be in effect until the close of the 2008 annual shareholders’ meeting of the Company. Under the terms of the Renewal Plan, one right has been granted for each restricted voting share. The rights granted under the Renewal Plan become exercisable only when a person, including any party related to it, acquires or announces its intention to acquire 20% or more of the Company’s outstanding restricted voting shares without complying with the “Permitted Bid” provisions or without approval of the Board of Directors. Should the rights become exercisable, each right would entitle a holder, other than the acquiring person and persons related to it, to purchase C$100 (US$106) worth of common shares of the Company for C$50 (US$53). A Permitted Bid is a bid made to all shareholders that is open for at least 60 days. If at the end of 60 days at least 50% of the outstanding shares, other than those owned by the offeror and certain related parties, have been tendered, then the offeror may take up and pay for the shares but must extend the bid for a further 10 business days to allow other shareholders to tender. Incentive Stock Option Plan The Company has an incentive stock option plan. Persons eligible to participate in the plan are directors, officers, and key employees of the Company and its subsidiaries or any other person engaged to provide ongoing management or consulting services to Patheon. The plan provides that the maximum number of shares that may be issued under the plan is 7.5% of the issued and outstanding restricted voting shares of the Company at any point in time. As of October 31, 2007, the total number of restricted voting shares issuable under the plan was 6,796,829 shares (2006 – 6,971,302), of which there are stock options outstanding to purchase 3,857,916 shares (2006 – 3,949,815) under the plan. The exercise price of restricted voting shares subject to an option is determined at the time of grant and the price cannot be less than the weighted average market price of the restricted voting shares of Patheon on the Toronto Stock Exchange during the two trading days immediately preceding the grant date. Options generally expire 10 years after the grant date and are also subject to early expiry in the event of death, resignation, dismissal or retirement of an optionee. Options vest over one to three years, with one-third vesting on each of the first, second and third anniversaries of the grant date for those vesting over three years. Please also refer to note 21 – “Stock-Based Compensation Expense”. A summary of the plan and changes during each of 2007 and 2006 are as follows: (Dollar amounts in Canadian dollars) Shares Number 2007 Weighted Average Exercise Price $ Shares Number 2006 Weighted Average Exercise Price $ Outstanding, beginning of the year Granted Exercised Forfeited 3,949,815 100,000 (8,000) (183,899) 10.53 4.83 3.53 10.98 3,886,840 547,500 (105,000) (379,525) 10.66 6.66 1.36 8.75 Outstanding, end of the year 3,857,916 10.38 3,949,815 10.53 Exercisable, end of the year 3,706,249 10.57 3,617,304 10.73 Patheon Inc. 2007 Annual Report 61 Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) The following table summarizes information about options outstanding at October 31, 2007: (Dollar amounts in Canadian dollars) Options Outstanding Options Exercisable Range of Exercise Prices Number Outstanding Weighted Average Remaining Contractual Life Weighted Average Exercise Price Number Exercisable Weighted Average Exercise Price $2.55 – 4.83 $6.17 – 7.57 $8.15 – 9.91 $10.91 – 13.95 $14.12 – 15.96 372,000 347,500 973,666 1,617,750 547,000 3.1 years 3.8 years 2.4 years 4.0 years 2.6 years $3.85 $6.67 $8.46 $12.17 $15.30 272,000 315,833 953,666 1,617,750 547,000 $3.49 $6.65 $8.46 $12.17 $15.30 3,857,916 $10.38 3,706,249 $10.57 Note 17 Other Information Foreign Exchange During 2007, the foreign exchange loss on operating exposures (including benefits from cash flow hedges and the revaluation of all foreign currency denominated working capital recorded in operating expenses was $3,410,000 (2006 – gain of $817,000). During 2007, the Company recorded a foreign exchange gain of $12,331,000 on the revaluation of certain U.S. dollar denominated debt, net of hedging activities, in its Canadian legal entity. During 2007, the Company also recorded a foreign exchange loss of $858,000 in connection with a change in the Company’s internal capital structure, which resulted in the recognition of foreign exchange translation losses previously recorded in accumulated other comprehensive income. Net Change in Non-Cash Working Capital Balances Related to Continuing Operations The net changes in non-cash working capital balances related to continuing operations are as follows: 2007 $ Accounts receivable Inventories Prepaid expenses and other Accounts payable and accrued liabilities Income taxes payable (813) (9,351) (955) 3,961 4,716 9,803 (1,225) (2,207) 6,560 7,575 (2,442) 20,506 2006 $ Related Party Transactions Revenues from companies controlled by a director and significant shareholder of the Company were in the amount of $473,000 (2006 – $3,145,000). These transactions were conducted in the normal course of business and are recorded at the exchanged amount. Accounts receivable at October 31, 2007 includes a balance of $392,000 (2006 – $446,000) with respect to these related party transactions. At October 31, 2007 the Company has an investment of $739,000 (2006 – $173,000) representing an 18% interest in two Italian companies (collectively referred to as “BSP Pharmaceuticals”) whose largest investor is an officer of the Company. These companies will specialize in the manufacturing of cytotoxic pharmaceutical products. The Company has accrued management fees owing to it under a management services agreement with BSP Pharmaceuticals of $1,593,000 for the year ended October 31, 2007 (2006 – nil). These fees will be invoiced to BSP Pharmaceuticals once it has finalized all of its bank financing. These services were conducted in the normal course of business and are recorded at the exchanged amounts. In connection with certain of BSP Pharmaceuticals’ bank financing, the Company has made commitments that it will not dispose of its interest in BSP Pharmaceuticals prior to January 1, 2011. 62 Patheon Inc. 2007 Annual Report Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Note 18 Income Taxes The following is a reconciliation of the expected income tax expense (recovery) obtained by applying the combined corporate tax rates to the loss from continuing operations before income taxes: 2007 $ 2006 $ Expected income tax expense (recovery) using statutory tax rates Change in valuation allowance Permanent differences and other: Foreign Domestic Goodwill impairment Foreign rate differentials Withholding tax on intercompany dividend Large Corporations Tax – Domestic (22,477) 4,797 (95,686) 6,381 6,899 (1,076) — 28,989 2,102 — 4,067 1,389 59,436 35,412 — 48 Provision for income taxes 19,234 11,047 Effective tax rate (29.5%) Canada Future income tax assets – long-term Share issue costs Deferred financing costs Accounting provisions not currently deductible for tax purposes Net operating loss carryforward Unclaimed R&D expenditures Book depreciation in excess of tax depreciation (federal) Valuation allowance 1,812 3,188 5,924 1,086 4,748 3,518 (16,072) 1,946 2,509 3,096 — 4,667 — (6,311) (4.0%) Components of future income taxes by jurisdiction are summarized as follows: 2006 $ 4,204 5,907 7,957 19,204 1,781 (2,091) 7,537 7,386 997 — 26,851 15,920 Future tax assets 31,055 21,827 Canada Future income tax liabilities – long-term Tax depreciation in excess of book depreciation (provincial) Investment tax credits Other 4,146 410 — 5,200 — 1,025 4,556 6,225 Foreign Future income tax liabilities – long-term Tax depreciation in excess of book depreciation Other 41,228 1,794 26,549 354 43,022 26,903 47,578 33,128 2007 $ Foreign Future income tax assets – long-term Accounting provisions not currently deductible for tax purposes Net operating loss carryforward Other Valuation allowance Future tax liabilities The Company has tax-effected net operating losses carried forward of $20,290,000; $17,063,000 of the losses have an indefinite life and $3,227,000 have expiry dates ranging from October 31, 2008 to October 31, 2026. Patheon Inc. 2007 Annual Report 63 Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Note 19 Segmented Information The Company is organized and managed as a single business segment, being the provider of commercial manufacturing and pharmaceutical development services. Canadian and foreign operations consist of the following: Year ended October 31, 2007 Revenues by client’s billing location: Canada USA Europe Other geographic areas Manufacturing Location CanadaUSA $ $ Europe Total $ $ 14,270 137,389 39,235 4,197 1,069 196,690 3,127 2,146 1,128 17,757 254,547 5,519 16,467 351,836 296,909 11,862 Total revenues 195,091 203,032 278,951 677,074 Capital assets 120,808 119,483 247,132 487,423 3,658 – – 3,658 Canada $ USA $ Europe $ Revenues by client’s billing location: Canada USA Europe Other geographic areas 21,323 138,587 53,010 4,696 856 231,184 846 190 1,930 13,751 202,842 5,444 24,109 383,522 256,698 10,330 Total revenues 217,616 233,076 223,967 674,659 Capital assets 103,002 142,491 221,872 467,365 3,077 – – 3,077 Goodwill Year ended October 31, 2006 Goodwill Manufacturing Location Total $ Revenues are attributed to countries based on the location of the client’s billing address, capital assets are attributed to the country in which they are located, and goodwill is attributed to the country in which the entity to which the goodwill pertains is located. During the year ended October 31, 2007, one client (2006 – two clients) accounted for more than 10% of the Company’s total revenues. As a percentage of total revenues, this client amounted to 13% (2006 – 13% and 12%). Revenue information by service activity is as follows: Years ended October 31, 2007 $ 2006 $ Commercial manufacturing – prescription Commercial manufacturing – over-the-counter Development services 514,069 46,549 116,456 76% 7% 17% 506,732 69,973 97,954 75% 10% 15% 677,074 100% 674,659 100% Note 20 Commitments and Contingencies Long-Term Operating Leases The Company has entered into long-term rental agreements expiring at various dates until 2014. The future rental payments for the next five years and thereafter are estimated as follows: 2008 – $3,113,000, 2009 – $2,807,000, 2010 – $2,065,000, 2011 – $1,658,000, 2012 – $1,148,000, and thereafter – $563,000. 64 Patheon Inc. 2007 Annual Report Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Other In the normal course of operations, the Company is subject to litigation and claims from time to time. The Company may also be subject to lawsuits, investigations and other claims, including environmental, labour, product, customer disputes and other matters. The Company believes that adequate provisions have been recorded in the accounts where required. Although it is not possible to estimate the extent of potential costs, if any, the Company believes that the ultimate resolution of such contingencies will not have a material adverse impact on the results of operations, financial position or liquidity. The Company’s tax filings are subject to audit by taxation authorities. Although the Company believes that it has adequately provided for income taxes based on the information available, the outcome of audits cannot be known with certainty and the potential impact on the financial statements is not determinable. Note 21 Stock-Based Compensation For the purposes of calculating the stock-based compensation expense in connection with the Company’s incentive stock option plan, the fair value of stock options is estimated at the date of the grant using the Black-Scholes option pricing model and the cost is amortized over the vesting period. The fair value of stock options is estimated at the date of the grant. The weighted average fair value of stock options granted for the year ended October 31, 2007 was $1.92 (2006 – $1.73). The fair value of stock options for purposes of determining stock-based compensation is estimated at the date of grant using the Black-Scholes option pricing model with the following assumptions: Risk free interest rate Expected volatility Expected weighted average life of the options Expected dividend yield 2007 2006 4.2% 42% 6 years 0% 4.2% 42% 4 years 0% The Company recorded stock-based compensation expense in the year of $220,000 (2006 – $928,000) for options granted on or after November 1, 2003. Note 22 Repositioning Expenses The Company has incurred a number of expenses associated with its performance enhancement program, which is intended to identify operational improvements and cost reduction initiatives. The related expenses include costs associated with a reduction in the workforce, project management costs and consulting fees from external specialists who are assisting in identifying operational improvements. During 2007, the Company also incurred professional fees and other costs in connection with its review of strategic and financial alternatives. The following is a summary of expenses associated with these initiatives (collectively “repositioning expenses”) for the years ended October 31, 2007 and 2006: 2007 $ 2006 $ Performance enhancement program: Employee-related expenses Consulting, professional and project management costs Strategic alternatives review 8,938 3,507 3,355 8,821 1,193 2,984 Total repositioning expenses 15,800 12,998 As at October 31, 2007, $6,048,000 (2006 – $8,699,000) of the repositioning expenses were unpaid and are recorded in accounts payable and accrued liabilities. Repositioning expenses paid during the year amounted to $18,998,000 (2006 – $4,215,000). Patheon Inc. 2007 Annual Report 65 Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) Note 23 Refinancing Expenses During 2007 the Company incurred expenses of $13,471,000 in connection with its refinancing activities. The expenses consist of transaction costs for the new senior secured term loan and senior secured revolving loan facility, costs allocated to the debt portion of the convertible preferred shares and prepayment charges in connection with cancellation of certain of the Company’s U.K. debt facilities. During 2006, the Company incurred charges of $1,643,000 in connection with the cancellation and prepayment of certain of its North American credit facilities. The Company also wrote off $6,332,000 in related deferred financing costs. Note 24 Financial Instruments (a) Foreign Exchange The Company utilizes financial instruments to manage the risk associated with fluctuations in foreign exchange and interest rates. The Company formally documents all relationships between hedging instruments and hedged items, as well as its risk management objective and strategy for undertaking various hedge transactions. As at October 31, 2007, the Company’s Canadian operations had entered into foreign exchange forward contracts to sell an aggregate amount of US$34,172,000 (2006 – US$60,000,000). These contracts hedge the Canadian operations expected exposure to U.S. dollar denominated cash flows and mature at the latest on April 21, 2008, at an exchange rate of $1.0535 Canadian. The mark-to-market value on these financial instruments as at October 31, 2007 was an unrealized gain of $4,052,000 (2006 – unrealized loss of $1,418,000) which has been recorded in accumulated other comprehensive income in shareholders’ equity. As at October 31, 2007 the Company has designated $141.6 million of U.S. dollar denominated debt as a hedge against its net investment in its subsidiaries in the U.S.A. and Puerto Rico. The exchange gains and losses arising from this debt, from the date so designated, are recorded in accumulated other comprehensive income in shareholders’ equity. As at October 31, 2007, the Company’s Canadian operations had entered into a foreign exchange contract to purchase US$45,000,000. The contract matures on January 28, 2010, at an exchange rate of 1.0015. The contract hedges the Canadian operations net US dollar balance sheet exposure. For accounting purposes, the contract has not been designated as a hedge. The mark-to-market value of this contract was a loss of $2,699,000, which has been recorded in the loss from continuing operations. (b) Interest Rate Risk The Company has exposure to movements in interest rates. The Company has entered into interest rate swaps to convert the interest expense on the senior secured term loan, until March 2010, from a floating interest rate to a fixed interest rate. The mark-to-market value of these financial instruments at October 31, 2007 was an unrealized loss of $2,593,000 which has been recorded in accumulated other comprehensive income in shareholders’ equity. (c) Fair Value The Company has determined the estimated fair values of its financial instruments based on appropriate valuation methodologies; however, considerable judgment is required to develop these estimates. Accordingly, these estimated fair values are not necessarily indicative of the amounts the Company could realize in a current market exchange. The estimated fair value amounts can be materially affected by the use of different assumptions or methodologies. The methods and assumptions used to estimate the fair value of financial instruments are described below: Cash and cash equivalents, accounts receivable, bank indebtedness, accounts payable and accrued liabilities and income taxes payable Due to the short period to maturity of these instruments, the carrying values as presented in the consolidated balance sheets are reasonable estimates of fair value. Long-term debt and debt component of convertible preferred shares With the exception of the senior secured term loan, the fair value of the Company’s remaining long-term debt and the debt component of the convertible preferred shares, based on current rates for debt with similar terms and maturities, is not materially different from its carrying value. As at October 31, 2007, the fair value of the senior secured term loan was estimated to be $142,582,000, based on current rates for debt with similar terms and maturities. Foreign exchange forward contracts and interest rate swaps These financial instruments are measured at their fair value on the balance sheet. 66 Patheon Inc. 2007 Annual Report Notes to Audited Consolidated Financial Statements October 31, 2007 and 2006 (Dollar information in tabular form is expressed in thousands of U.S. dollars) (d) Credit Risk The Company’s financial assets that are exposed to credit risk consist primarily of cash and cash equivalents, accounts receivable and foreign exchange forward contracts with positive fair values. As at October 31, 2007, the Company’s cash and cash equivalents were held in interest-bearing balances with banks. It is the Company’s policy to invest its cash and cash equivalents (including any short-term investments) in entities with an investment grade credit rating. Credit risk is further reduced by limiting the amount which is invested in any one government or corporation. The Company, in the normal course of business, is exposed to credit risk from its clients, substantially all of which are in the pharmaceutical industry. These accounts receivable are subject to normal industry credit risks. The Company is also exposed to credit risk from potential default by any of its counterparties on its foreign exchange forward contracts. The Company manages this credit risk by dealing with counterparties which are major financial institutions and which the Company anticipates will satisfy their obligations under the contracts. Note 25 Subsequent Events On December 6, 2007, the Company announced that it had entered into a definitive agreement to sell its Niagara-Burlington commercial manufacturing business to Pharmetics Inc. Under the terms of the agreement Pharmetics will acquire the assets, including equipment facilities and land at the Company’s facilities in Fort Erie and Burlington Gateway. Pharmetics will provide employment to all of the commercial manufacturing employees at the two sites and, subject to assignment of third party contracts, will continue to manufacture and supply all of the products currently manufactured at these sites. The transaction is expected to be completed on or about January 31, 2008, subject to closing conditions including regulatory approvals, the assignment of client and other contracts and the completion of financing arrangements by the purchaser. The purchase price for the business is CAD$5.75 million plus working capital, subject to adjustments. On December 14, 2007, the Company announced that as a result of its review of the Puerto Rico operations, with a focus on restructuring the operations, eliminating operating losses and developing a long-term plan for the business, it has decided to retain and continue to streamline its facilities in Caguas and Manati and divest of its facility in Carolina. Revenues for the year ended October 31, 2007 for the Carolina operations were $42.9 million. The Carolina operations reported a profit before repositioning expenses, asset impairment charge, depreciation and amortization, foreign exchange losses reclassified from other comprehensive income, interest, refinancing charges, write-off of deferred financing costs and income taxes for the year ended October 31, 2007 of $6.1 million. Note 26 Comparative Amounts Certain of the comparative amounts have been reclassified to conform to the current year presentation. Patheon Inc. 2007 Annual Report 67 Board of Directors and Corporate Governance Board of Directors Corporate Governance Peter A.W. Green Chairman of the Board, Patheon Inc. Overview Wesley P. Wheeler Chief Executive Officer, Patheon Inc. Ramsey A. Frank Managing Director, JLL Partners Inc. Paul S. Levy Managing Director, JLL Partners Inc. Thomas S. Taylor Senior Principal, JLL Partners Inc. Joaquín B. Viso Corporate Director (Former Chairman, MOVA Pharmaceutical Corporation) Derek J. Watchorn President and Chief Executive Officer, PSPIB Destiny Inc. Gregory C. Wilkins Chief Executive Officer and President, Barrick Gold Corporation Patheon’s Board of Directors has stewardship and responsibility, on behalf of Patheon’s shareholders, for overseeing the proper and effective management of the Company. In fulfilling its mandate, the Board reviews and approves governance principles and guidelines which are consistent with Patheon’s core principles of integrity, respect and excellence. Board Composition and Responsibilities Since 1996, the role of Chair of the Board of Directors has been separate from that of the Chief Executive Officer and has been held by an independent director who is not related to the Company. There were six directors elected at the 2007 annual shareholders meeting on April 19, 2007. These directors were joined on April 27, 2007 by three representatives of JLL Partners Inc., following shareholder approval and completion of a US$150 million convertible preferred share investment in Patheon by JLL Partners. In June 2007, George L. Ploder resigned as a director after 15 years of service. Included on the Board are the Chief Executive Officer of Patheon and the former non-executive Chairman of Patheon’s Puerto Rican subsidiary, MOVA Pharmaceutical Corporation. The Board believes this composition allows for a constructive exchange of opinions leading to reasoned and informed decision-making on behalf of Patheon’s shareholders. Among the Board’s principal responsibilities, as reflected in its Charter, are the following: 3 developing and monitoring Patheon’s approach to corporate governance 3 responsibilities relating to management including: • satisfying itself as to the integrity of management and the fostering of a culture of integrity throughout the organization • succession planning for Patheon’s senior management • adopting and implementing an executive compensation policy for Patheon’s senior management Further Information For additional biographical information, please refer to the Management Proxy Circular for the 2008 Annual and Special Meeting of Shareholders or Patheon’s web site at www.patheon.com. 68 Patheon Inc. 2007 Annual Report Corporate Governance 3 oversight of the operation of the business including: • ensuring that adequate risk management practices and strategies are in place • strategic planning • ensuring the integrity of Patheon’s internal control and management information systems • developing and reviewing Patheon’s corporate disclosure policies • ensuring appropriate financial reporting • overseeing pension plan administration and related matters • monitoring compliance with the Code of Business Conduct. Generally, a portion of the Board meeting is held in camera at which only non-management directors are present. In accordance with procedures of the Corporate Governance Committee, Board members are able to engage special advisors such as independent legal counsel, compensation specialists or other professionals in appropriate circumstances. A copy of the Charter of the Board of Directors is available for review on Patheon’s website at www.patheon.com under “Investor Relations/ Corporate Governance”. Committees The Board’s principal responsibilities are managed by three standing committees of the Board: Audit Committee, Corporate Governance Committee, and Compensation and Human Resources Committee. Summaries of the principal duties and responsibilities of these committees, as reflected in their respective charters and copies of the full charters are available for review on Patheon’s website at www.patheon.com under “Investor Relations/Corporate Governance”. The members of the respective committees and the number of meetings attended are set out in Patheon’s Management Proxy Circular for the 2008 Annual and Special Meeting of Shareholders, a copy of which will be available on Patheon’s website at www.patheon.com under “Investor Relations/Corporate Governance”. Disclosure Policy Patheon’s Corporate Disclosure Policy guides Patheon in its interactions with shareholders, financial analysts and the public. It reflects the underlying principles that disclosure of material information about the company should be: (i) timely, factual, accurate and balanced; and (ii) broadly disseminated in accordance with all applicable legal and regulatory requirements. The Policy also reflects “best practices” recommended by the Canadian Investor Relations Institute. The Corporate Disclosure Policy contains a provision mandating its review by the Board at least every two years, and it was most recently reviewed and updated by the Board in January 2008. In addition, the Corporate Disclosure Policy has been made publicly available on Patheon’s web site at www.patheon.com under “Investor Relations/Corporate Governance”. Code of Business Conduct The principles of integrity, respect and excellence are documented in Patheon’s Code of Business Conduct, which was adopted by the Board of Directors in 2002 to provide guidelines to employees, board members and agents for addressing issues and questions relating to Patheon’s business practices. A copy of Patheon’s Code of Business Conduct is available on Patheon’s web site at www.patheon.com under “Investor Relations/ Corporate Governance”. In 2005, Patheon engaged EthicsPoint, Inc. to act as Patheon’s external service provider with respect to a confidential whistleblower program and the program was rolled out to employees during fiscal 2006. The program is both telephone and web based. Employees may use this service to report any activities they suspect may be in violation of Patheon’s Code of Business Conduct, including matters relating to accounting, internal accounting controls and auditing. The EthicsPoint reporting system is available to Patheon employees in all jurisdictions except Italy and France, where certain laws preclude Patheon from offering an anonymous reporting service to its employees and, instead, employees in those jurisdictions may report violations to management only on a non-anonymous basis. Further Information Further details of Patheon’s approach to corporate governance matters are contained in our Proxy Circular for the 2008 Annual and Special Meeting of Shareholders. Patheon Inc. 2007 Annual Report 69 Senior Management Senior Management Wesley P. Wheeler Chief Executive Officer Nick A. DiPietro President and Chief Operating Officer John H. Bell, CA Chief Financial Officer Shabbir T. Anik, Ph.D., MBA President, Global Pharmaceutical Development Services and Chief Scientific Officer Clive V. Bennett President, Patheon U.S.A. Aldo Braca President, Patheon Europe Kevin D. Duffy Executive Vice-President, Global Sales, Marketing and Business Development Michael S. Harding Executive Vice-President, Global Quality Operations Jacqueline Le Saux General Counsel – North America and Corporate Secretary Further Information For additional biographical information, please refer to the Management Proxy Circular for the 2008 Annual and Special Meeting of Shareholders or Patheon’s web site at www.patheon.com. 70 Patheon Inc. 2007 Annual Report Tom L. Ferguson Senior Vice-President, Global Information Technology Steven M. Liberty Senior Vice-President, Operations, Canada Roy J. Wieschkowski Senior Vice-President, Corporate Human Resources and Environmental, Health & Safety Luis Albors General Manager and Vice-President, Puerto Rico Operations Jonathan Arnold Vice-President, Global Supply Chain Norman Barras Vice-President, Pharmaceutical Development Services – Europe Giuseppe Cassisi Vice-President and Business Executive Nicholas M. Dowd, CA Vice-President and Controller, Patheon Inc. Ian Jones, ACA Vice-President, Finance European Operations Andrew Kelley Vice-President, U.K. and France Operations Peter Lucyshyn Vice-President, Quality Operations, North America Antonella Mancuso Vice-President, Italian Operations Colin M. Minchom, Ph.D. Vice-President, Pharmaceutical Development Services – Canada Global Operations Global Operations Commercial Manufacturing Operations United States Europe Canada Puerto Rico Aldo Braca President, Patheon Europe Steven M. Liberty Senior Vice-President, Operations, Canada European Business Office Via Morolense 87 03013 Ferentino (FR) Italy Tel.: +39 0775 3991 Toronto Region Operations 2100 Syntex Court Mississauga, Ontario L5N 7K9 Tel.: (905) 821-4001 Debbie Rak Site Director Luis Albors Vice-President and General Manager, Puerto Rico Operations Caguas Operations Villa Blanca Industrial Park State Road 1, Km. 34.8 Caguas, Puerto Rico 00725 Tel.: (787) 746-8500 Janet Maldonado Site Director Manatí Operations State Road 670, Km. 2.7 Manatí, Puerto Rico 00674 Tel.: (787) 854-3005 Ileana Quiñnones Vice-President, Operations Carolina Operations Ave. 65 Infantería Industrial Park, Km. 12.6 Carolina, Puerto Rico 00984 Tel.: (787) 701-0010 Carlos Arroyo Site Director CINCINNATI Clive V. Bennett President, Patheon U.S.A. Cincinnati Operations 2110 East Galbraith Road Cincinnati, Ohio 45237-6300 Tel.: (513) 948-9111 Bob Zinser Site Director U.K. AND FRANCE Andrew Kelley Vice-President, U.K. and France Operations Bourgoin-Jallieu Operations 40, boulevard de Champaret B.P. 448 38317 Bourgoin-Jallieu, Cedex France Tel.: +33 4 7493 8700 Hugh Packer Site Director Swindon Operations Kingfisher Drive Covingham, Swindon Wiltshire SN3 5BZ England Tel.: +44 1793 524411 ITALY Toronto York Mills Operations 865 York Mills Road Toronto, Ontario M3B 1Y5 Tel.: (416) 443-9030 Roman Charko Site Director Burlington Century Operations 977 Century Drive Burlington, Ontario L7L 5J8 Tel.: (905) 639-5254 Whitby Operations 111 Consumers Drive Whitby, Ontario L1N 5Z5 Tel.: (905) 668-3368 Roman Charko Site Director Antonella Mancuso Vice-President, Italian Operations Ferentino (Rome) Operations Via Morolense 87 03013 Ferentino (FR) Italy Tel.: +39 0775 3991 Monza Operations Viale G.B. Stucchi, 110 I-20052 Monza Italy Tel.: +39 039 2047 1 Patheon Inc. 2007 Annual Report 71 Global Operations Global Operations (continued) Pharmaceutical Development Services Shabbir T. Anik, Ph.D., MBA President, Global Pharmaceutical Development Services and Chief Scientific Officer United States Europe Canada Caguas Villa Blanca Industrial Park State Road 1, Km. 34.8 Caguas, Puerto Rico 00725 Tel.: (787) 746-8500 Miguel Hernández Acting Director, PDS, Puerto Rico Norman Barras Vice-President, Pharmaceutical Development Services, Europe Colin Minchom, Ph.D. Vice-President, Pharmaceutical Development Services, Canada Swindon Operations Kingfisher Drive Covingham, Swindon Wiltshire SN3 5BZ England Tel.: +44 1793 524411 Toronto Region Operations 2100 Syntex Court Mississauga, Ontario L5N 7K9 Tel.: (905) 821-4001 Cincinnati Operations 2110 East Galbraith Road Cincinnati, Ohio 45237-6300 Tel.: (513) 948-9111 Paul Wilkinson, Ph.D. Group Director, PDS, Cincinnati Milton Park 151 Milton Park Abingdon Oxfordshire OX14 4SD England Tel.: +44 1235 433010 Ferentino (Rome) Operations Via Morolense 87 03013 Ferentino (FR) Italy Tel.: +39 0775 3991 72 Patheon Inc. 2007 Annual Report Corporate Information Corporate Office Share Information 7070 Mississauga Road, Suite 350 Mississauga, Ontario L5N 7J8 Canada Telephone: (905) 821-4001 Fax: (905) 812-6705 Listing: Toronto Stock Exchange (TSX) Symbol: PTI Shareholder Account Enquiries Computershare Investor Services Inc. 100 University Avenue, 9th floor Toronto, Ontario M5J 2Y1 Canada Tel: 1-800-564-6253/(514) 982-7555 Fax :1-888-453-0330/(416) 263-9394 Email: [email protected] Web site: http://www.computershare.com Transfer Agent and Registrar Computershare Investor Services Inc. Investor and Financial Information John Bell, Chief Financial Officer Tel: (905) 812-6812 Fax: (905) 812-6613 Email: [email protected] Shelley Jourard Director, Corporate Communications Tel: (905) 812-6614 Fax: (905) 812-6613 Email: [email protected] Auditors Ernst & Young LLP Legal Counsel Davies Ward Phillips & Vineberg LLP – Toronto, Canada Cabinet Ratheaux – Lyon, France Montanari Brescia e associati – Milan, Italy Macfarlanes – London, England Fiddler Gonzalez & Rodriguez, P.S.C. – Puerto Rico, U.S.A. Thompson Hine LLP – Cincinnati, U.S.A. Principal Lenders J.P. Morgan Securities Inc. GE Commercial Finance Banca Intesa S.p.A., Italy Dividend Policy The Board of Directors periodically reviews the dividend policy of Patheon Inc. The Company currently does not pay dividends on its restricted voting shares, and has no plans to do so in the foreseeable future, preferring to reinvest its cash to enhance the Company’s growth. As of October 31, 2007: (All share prices expressed in Canadian dollars) Shares Outstanding: 90,624,388 Public Float: 79,296,000 High/Low/Close for the Fiscal Year Ended October 31, 2007: $6.72/$2.85/$3.50 As of January 31, 2008: (All share prices expressed in Canadian dollars) Shares Outstanding: 90,624,388 Public Float: 79,308,000 High/Low/Close for the Twelve Months Ended January 31, 2008: $5.45/$2.85/$3.40 Patheon Stock Performance vs S&P/TSX Composite Index – Total Return (Value of C$100 invested on October 31, 2002) (all investment values expressed in Canadian dollars) 0DU 15* 0DU 0DU 0DU 0DU 0DU 41549$PNQPTJUF*OEFY°5PUBM3FUVSO Annual Meeting Shareholders are invited to attend Patheon’s Annual and Special Meeting of Shareholders to be held at 10:30 a.m. (Eastern Standard Time) on Thursday, March 27, 2008: The Westin Harbour Castle Harbour A Ballroom One Harbour Square Toronto, Ontario M5J 1A6 The meeting will be broadcast live over the Internet on Patheon’s website at www.patheon.com. An archived version of the webcast will be available on Patheon’s website after the meeting. www.patheon.com