Biodiversity Informatics in Malaysia
Transcription
Biodiversity Informatics in Malaysia
INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA Biodiversity Informatics in Malaysia – Special Emphasis on Herbarium Database Saw Leng Guan Forest Research Institute Malaysia Workshop on Biodiversity Data Sharing Environment in Asia 10-13 April 2014 Haikou, China BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my BACKGROUND BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Species Diversity in Malaysia Groups Fungi (macro) Mosses Vascular Plants Invertebrates Freshwater Fishes Marine Fishes Amphibians Reptiles Birds Mammals BrandLaureate Best Brand Awards ISO 9001-2008 Certified Total for the country c. 4,000 522 c. 15,000 c. 150,000 449 1,619 242 567 742 306 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Herbarium and Museum Collections in Malaysia • 22 institutions that maintain natural history collections • Total collection of over 3 million specimens BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Herbarium Collections in Malaysia Collections Forest Research Institute Malaysia Forest Research Centre, Sabah Forest Research Centre, Sarawak Universiti Kebangsaan Malaysia University Malaya Department of Agriculture Number of specimens >350,000 >300,000 >250,000 c. 72,000 c. 65,000 c. 30,400 Vertebrate collections in Malaysia Mammals Herpetofauna Birds Marine fishes Fresh water fishes 2 0 0 1,147 348 Parks and Wildlife Department 3,655 1,530 500 0 59 Forest Research Institute M’sia 0 2,106 0 0 0 Sabah Museum 3,519 5,194 3,628 272 2,893 Sabah Parks 1,827 7,925 2,527 0 2,652 Sarawak Museum 12,000 3,400 12,000 1,500 4,000 Sarawak Biodiversity Centre 94 441 913 0 0 Borneo Marine Research Institute, Universiti Malaysia Sabah 0 13 0 149 0 Kolej Universiti Sains & Teknologi Malaysia 0 15 0 100 500 21,097 20,624 19,568 3,168 10,452 Institutions Fishery Department Total 4/22/2014 BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my 6 Invertebrate collections in Malaysia Institutions Insects Agriculture Department Crustacean Mollusks 60,000 200 150 0 50 0 2,533 0 0 Forest Research Centre, Sabah 130,800 0 0 Forest Research Institute Malaysia 600,000 0 0 Malaysian Agriculture Research and Development Institute (MARDI) 30,000 0 0 Sabah Museum 5,639 304 0 Sabah Parks 52,106 314 568 Sarawak Museum 100,000 1,000 1,200 4,079 874 468 Sarawak Forestry Corporation 458,133 0 0 Universiti Kebangsaan Malaysia 130,000 0 0 n.a. 0 617 47,000 0 0 Fishery Department Parks and Wildlife Department Sarawak Biodiversity Centre University Malaysia Sabah University Malaysia Sarawak Total 1,620,290INSTITUT PENYELIDIKAN 2,742 3,003 7 PERHUTANAN MALAYSIA 4/22/2014 BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Malaysia’s Clearing House Mechanism Website BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Database resource in CHM • Checklists – Vascular Plants (with short descriptions and photographs) – Animals • Mammals, birds, reptiles, amphibians, fishes (freshwater and marine) • National Parks and Protected Area database • Publications and Bulletins BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Institutions with Biodiversity Databases in Malaysia • Herbarium databases – Forest Research Institute Malaysia – Forest Research Centre, Sandakan, Sabah – Forest Research Centre, Kuching, Sarawak BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Botanical Specimen Dataset at the Forest Research Institute Malaysia BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my The Herbarium at the Forest Research Institute Malaysia BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Botanical Research And Herbarium Management System (BRAHMS) BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Data Structure of BRAHMS Core databases Collection databases Botanical records Taxon info Plot samples DNA Geographic info Living collections People Seed bank Maps Images & documents BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Main interactive databases in BRAHMS Databases Taxonomic Information Localities/Gazetteers People Collections BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S Number of Records 55,048 28,431 9,817 233,000 INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Taxon Information BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Gazetteer Information BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my People Dictionary BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my 250000 Data Entry at Kepong Herbarium Herbarium specimens added into BRAHMS at Kepong 200000 Records 150000 100000 50000 BrandLaureate Best Brand Awards Year INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA ISO 9001-2008 Certified 5S FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my 2013 2012 2011 2010 2009 2008 2007 2006 2005 2004 2003 2002 2001 2000 1999 1998 1997 1996 1995 1994 1993 1992 1991 0 Output from Kepong Database • Flora revision – Tracks taxonomic information • • • • • • • • Nomenclature, typification Synonymy Authority Literature Checklists Distribution maps and other analysis Conservation assessment and studies Other outputs BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Distribution Map Iguanura kelantanensis Botanical Projects • Tree Flora of Sabah and Sarawak – Project launched in 1991, to cover c. 3,500 tree species – To date completed 7 volumes of about 12 volumes. – Project led by E. Soepadmo with 4 researchers and 2 support staff in FRIM – Collaboration and contribution from over 25 local, regional and international botanists BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Flora of Peninsular Malaysia Project Started in August 2005 Project to revise over 8,900 taxa of vascular plants Project will span over 25 years to complete Published 6 volumes since project started BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Published volumes BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Other publications arising from botanical research at FRIM BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Conservation of Rare and Threatened Plants of Peninsular Malaysia • Started in Aug. 2005 • Threat assessment of selected families, Dipterocarpaceae, Palmae, Begoniaceae and endemic tree species • Detail conservation biology studies for some selected species, mainly hyper-endemics BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my First volume for Malaysia Plant Red List – Peninsular Malaysian Dipterocarpacae BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Conservation Status Assessment for Selected Plants of Peninsular Malaysia at 2012 Conservation status Number of taxa 4 (0.4%) Extinct (EX) Critically Endangered (CR) 97 (10.0%) Endangered (EN) 133 (13.6%) Vulnerable (VU) 148 (15.2%) Rare (RA) 29 (3.0%) Total Conservation Concern Taxa 411 (42.2%) Near Threatened (NT) 182 (18.7%) Least Concern (LC) 327 (33.5%) Data Deficient (DD) 55 (5.6%) Total BrandLaureate Best Brand Awards 975 (100%) ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Conclusion • Clearing House Mechanism – online and freely available for public use • Herbarium database – currently only local area network but will be available online soon BrandLaureate Best Brand Awards ISO 9001-2008 Certified 5S INSTITUT PENYELIDIKAN PERHUTANAN MALAYSIA FOREST RESEARCH INSTITUTE MALAYSIA http://www.frim.gov.my Cycas cantafolia (described in 2010 from Johor) Thank you so much
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