Appendices 3 - Sanitation District
Transcription
Appendices 3 - Sanitation District
Appendix 3 Microbiology Appendices Chapter 3 Microbiology 2014-2015 Biennial Report Appendix 3.1 Manifold Microbiological Sampling Results Appendix 3.2 JWPCP Microbiology Laboratory Shoreline and Manifold Station Sampling Procedure Appendix 3.3 LACSD Nearshore Bacteriological Sampling Field and Safety Procedures Appendix 3.4 Total Coliform, Fecal Coliform, and Enterococcus Enumeration by Membrane Filtration – (Method 349 – Total Coliform, Method 356 – Fecal Coliform, and Method 357 – Enterococcus) and Fecal Coliform Enumeration by Multiple Tube Fermentation – (Method 351) Appendix 3.5 Rain Effects on Fecal Indicator Bacteria Concentrations in Nearshore Water Samples Appendix 3.6 Total Coliform, Fecal Coliform, Enterococcus and Shellfish Harvesting Receiving water Microbiological Results Appendix 3.7 Spatial and Temporal Trends in Fecal Coliform and Enterococcus Concentrations Appendix 3.1 Manifold Microbiological Sampling Results Appendix 3.1 Manifold Microbiological Sampling Results All 2014 and 2015 manifold results were used to calculate the 30-day geometric means results Month 2014 JAN FEB MAR APR MAY JUN JUL AUG SEP OCT NOV DEC 2015 JAN FEB MAR APR MAY JUN JUL AUG SEP OCT NOV DEC Total Coliform 120" 90" OUTFALL OUTFALL < 289 < 151 < 130 431 < 357 < 209 < 362 < 141 < 288 < 145 < 342 < 204 < 397 < 136 < 194 < 45 < 181 < 73 < 201 < 105 < 150 < 49 < 236 < 125 < 255 807 < 235 1005 < 293 559 < 483 < 197 < 498 < 184 < 432 < 169 < 78 331 < 337 < 153 < 579 < 127 < 463 < 80 < 167 478 < 427 < 136 Fecal Coliform 120" 90" OUTFALL OUTFALL < 19 <9 < 17 <9 < 25 < 33 <9 48 < 21 18 < 16 < 11 < 10 53 < 43 < 12 < 17 < 19 < 10 <9 < 16 <9 <9 13 < 14 < 10 < 58 < 13 70 15 19 8 < 13 33 70 26 95 16 46 28 217 11 < 12 < 20 < 29 < 26 < 14 < 10 Manifold samples are grab samples collected once daily. There are no bacteriological limits in effect at the manifold. App 3.1 - 1 Enterococcus 120" 90" OUTFALL OUTFALL <9 <9 < 10 <9 <9 < 10 <9 <9 <9 <9 <9 <9 <9 <9 <9 <9 <9 <9 <9 <9 <9 <9 <9 <9 <9 <9 <9 < 11 < 10 < 10 <9 < 10 <9 <9 <9 <9 <9 <9 <9 < 10 < 12 <9 <9 <9 <9 < 11 < 10 <9 Appendix 3.2 JWPCP Microbiology Laboratory Shoreline and Manifold Station Sampling Procedure Sanitation Districts of Los Angeles County Laboratories Section METHOD APPROVAL FORM Test Code N/A Method Name Shoreline and Manifold Sampling Procedure Version 13.1.0 Method Date September 10, 2013 Reasons for Method Revision Standard Annual Revisions Revised by: Mark Patterson Laboratory Technician JWPCP WQL cl/ Signature Date /W/"5. Debra Leachman Microbiologist II JWPCP WQL Date Approved by: Kathy Walker Supervisor I JWPCP WQL 9AW/3 Signature Date Final Approval: Jean Lee Superintendent of JWPCP Laboratory Signature App 3.2 - 1 Date JWPCP MICROBIOLOGY LABORATORY SHORELINE AND MANIFOLD STATION SAMPLING PROCEDURE Introduction The Los Angeles County Sanitation Districts monitors designated shoreline stations for fecal indicator bacteria (FIB) levels as part of the receiving water monitoring program described in the current Joint Water Pollution Control Plant NPDES Permit (Order No. R4-2011-0151, NPDES No. CA0053813), which became effective on September 1, 2011. This 2011 NPDES permit continued the previous shoreline bacteriological monitoring program of weekly monitoring frequency. The shoreline monitoring stations are located along the Palos Verdes Peninsula and south to San Pedro, coastal areas most likely impacted by the JWPCP outfall system. The Permit requires the weekly shoreline monitoring program to include sampling from nine sites: historical District’s shoreline stations S1, S2, S3, S5, S6 and S7, and 1991 NPDES amended sites SB and SM. The SMBBB-TMDL monitoring program also requires an additional observation only station SMB-O-9. For additional information on Santa Monica Bay Beaches Bacterial TMDL, see Santa Monica Bay Beaches Bacterial TMDLs Coordinated Shoreline Monitoring Plan (4/07/04). The weekly shoreline bacteriological monitoring program analyzes for total coliform, fecal coliform and enterococcus indicator bacteria using methods approved in Title 40 CFR for marine receiving waters. The FIB concentrations are evaluated for compliance with water contact standards (REC-1) for both single sample and geometric mean criteria. Each bacterial sample collected must be associated with a recorded set of field observation data and must be analyzed within the method holding time limit. Repeat sampling is required when a sample exceeds any single sample criteria. The District’s shoreline sampling program is coordinated with the environmental monitoring program, which falls on Mondays, at L.A. County Department of Public Health. Therefore, the shore samples are routinely collected on Mondays, with few exceptions such as holidays falling on Mondays, temporary lack of staff, or safety/weather conditions that compromises personnel or the lab. If samples are not collected on a Monday, every reasonable attempt to reschedule during the same calendar week (Sunday through Saturday) shall be made. In addition to the ocean monitoring requirements, daily samples are collected from White Point manifold pumping station. Effluent samples from the two main discharge lines, 90-inch and 120inch, are analyzed for FIB and chlorine residual. 1. Scope and application: 1.1 This procedure is applicable for the collection of microbiological samples from all shoreline samples covered under the current NPDES permit. JWPCP Water Quality Laboratory SMSP- 1 Version 13.1.0 App 3.2 - 2 September 10, 2013 1.2 This procedure is also applicable to the collection of microbiological and chlorine residual samples from the White Point manifold. 1.3 The following stations shall be maintained according to the current amended NPDES discharge permit. Each sampling and observation-only station has been assigned a TMDL station identification code. Descriptions of each station include general directions to the sample site and specific coordinates. NPDES Site ID: S1 Location: Long Point Thomas Guide TMDL Site ID: SMB-7-3 Page: 822 Grid: H5 Coordinates: N33.7386° W118.3940° Comments: This open beach site is located at 7200 Palos Verdes Drive South, Rancho Palos Verdes, located along the beach at Terranea Resort. To access the site turn from Palos Verdes Drive South into the Terranea driveway and follow the left perimeter of the parking lot the southeast corner. By foot, follow the pathway down to the shoreline. The sample is collected at the end of the path. NPDES Site ID: S2 Location: Abalone Cove Thomas Guide TMDL Site ID: SMB-7-4 Page: 823 Grid: A5 Coordinates: N33.7416° W118.3792° Comments: This open beach site is located at 6000 Palos Verdes Drive South, Rancho Palos Verdes. To access the site, turn from Palos Verdes Drive South into the locked gate driveway, Abalone Cove Shoreline Rd. Alternatively, turn into the Abalone Cove parking lot approximately 100 yards northwest of the site. Follow the unpaved road down past the nursery school to the lifeguard tower. Next to the lifeguard tower is a stairway that leads directly onto the shoreline where the sample is collected. JWPCP Water Quality Laboratory SMSP- 2 Version 13.1.0 App 3.2 - 3 September 10, 2013 NPDES Site ID: S3 Location: Portuguese Bend Thomas Guide TMDL Site ID: SMB-7-5 Page: 823 Grid: C6 Coordinates: N33.7362° W118.3602° Comments: This beach site is located along the private beach within Portuguese Bend Club at 4100 Palos Verdes Drive South, Ranch Palos Verdes. To access this site, turn from Palos Verdes Drive South into the Portuguese Bend Club driveway. Bear right once past the paddle tennis courts into the parking lot. The shoreline where the sample is collected is directly in front of the parking lot. NPDES Site ID: S5 TMDL Site ID: SMB-7-6 Thomas Guide Page: 853 Grid: G1 Location: Royal Palms County Beach/ White Point Coordinates: N33.7177° W118.3220° Comments: This beach site is located at Royal Palms County Beach/White Point, 1801 Paseo del Mar, San Pedro. To access the site, turn from South Paseo del Mar into the facility and follow the driveway past the kiosk down to the parking lot. Walk to the right of the lifeguard stand. The sample is collected just to the right of the jetty. NPDES Site ID: S6 TMDL Site ID: SMB-7-8 Location: Wilder Addition at Point Fermin Park Coordinates: N33.7098° W118.2990° Comments: This open beach site is located at the Wilder Addition Park, 825 Paseo del Mar, San Pedro. To access the site, park on South Paseo del Mar adjacent to South Meyler Street. Follow the driveway past the public restroom to the bottom of the lot; go down the steps to another footpath that leads to a stairway. The sample is collected at the bottom of the stairway. JWPCP Water Quality Laboratory Thomas Guide Page: 854 Grid: A2 SMSP- 3 Version 13.1.0 App 3.2 - 4 September 10, 2013 NPDES Site ID: S7 Location: Cabrillo Beach Thomas Guide TMDL Site ID: SMB-7-9 Page: 854 Grid: C2 Coordinates: N33.7092° W118.2831° Comments: This open beach site is located at outer Cabrillo Beach, 3720 Stephen M. White Drive. Enter through Oliver Vickery Circle Way. Follow Breakwater drive, past the old museum to the lifeguard building. The sample is collected on the ocean side, directly in front of the lifeguard building. Weather and tidal condition are determined at this site. NPDES Site ID: SB Location: Bluff Cove Thomas Guide TMDL Site ID: SMB-7-2 Page: 792 Grid: F5 Coordinates: N33.7938° W118.4070° Comments: This open beach site is located at Bluff Cove: 600 Paseo del Mar, Palos Verdes Estates. To access the site, park on the 700 block of Paseo del Mar and follow the footpath down to the base of the trail. The sample is collected where the path meets the shoreline. NPDES Site ID: SM Location: Malaga Cove Thomas Guide TMDL Site ID: SMB-7-1 Page: 792 Grid: G3 Coordinates: N33.8034° W118.3959° Comments: This open beach site is located at 300 Paseo Del Mar, Palos Verdes Estates. To access the site, turn from Paseo del Mar into the Malaga Cove International School parking lot. Follow the asphalt footpath down to the base of the trail. The sample is collected at the base of the Malaga Cove sign. JWPCP Water Quality Laboratory SMSP- 4 Version 13.1.0 App 3.2 - 5 September 10, 2013 NPDES Site ID: SMBO-9 TMDL Site ID: SMBO-9 Thomas Guide Page: 792 Grid: G3 Location: Storm Drain by PV Swim Club Coordinates: N33.8022° W118.3980° Comments: This site is located at 300 Paseo del Mar, Palos Verdes Estates. To access the site, turn from Paseo del Mar into the Malaga Cove parking lot. Access via the PV Swim/Beach Club. Alternatively, follow the asphalt footpath down to the base of the trail. The storm drain is located approximately 50 yards southwest of the Palos Verdes Swim/Beach Club. This storm drain location is currently monitored for observational data only. 2. 3. Summary of Method 2.1 Ocean samples are collected in sterile polypropylene bottles. 2.2 Manifold bacteria samples are collected in Whirl-Pack® sampling bags with sodium thiosulfate. 2.3 Bacteriological samples are stored in ice during transport to inhibit changes in microbial population. 2.4 Chlorine residual samples collected at the White Point manifold are analyzed on site with a HACH DPD kit (SM 4500CL-G). 2.5 Observations are noted for each shoreline site at the time of sampling. Sample Handling and Preservation 3.1 All bacteriological samples are preserved by being kept in ice during transport. 3.2 Chlorinated bacteriological samples must be treated with sodium thiosulfate to preserve populations against the effects of chlorine. 3.3 All samples must be handled aseptically to prevent contamination. 3.4 All bacteriological samples must be collected in sterile containers to prevent contamination. 3.5 Chlorine residual must be analyzed immediately and on-site to prevent loss of chlorine prior to analysis. JWPCP Water Quality Laboratory SMSP- 5 Version 13.1.0 App 3.2 - 6 September 10, 2013 4. 5. 6. Interferences 4.1 Stormy weather can make sampling hazardous or impractical. The samples can be omitted, provided that such omissions do not occur more than 10 days in any calendar year. Reasonable effort should be made to sample later in the same day, if conditions improve. 4.2 Splitting sampling work between two technicians might not be possible on some days. A single technician, if necessary, may perform the entire run. Apparatus 5.1 Sterile, wide-mouth polypropylene bottles, 500 mL and 1000 mL in volume 5.2 Sampling poles 5.3 Whirl-Pak® sterilized sampling bags with sodium thiosulfate, 10 mg 5.4 Ice chest, filled with ice 5.5 HACH total chlorine DPD kit 5.6 Two amber 100mL glass bottles Reagents 6.1 7. HACH DPD Total Chlorine Reagent pillow or dispenser Procedure Ocean Sample Collection and Handling: 7.1 Collect samples that are representative of the water being tested and use aseptic techniques to avoid sample contamination. 7.2 Collect samples in sterilized polypropylene bottles that have passed the 48-hour TSB sterility period. 7.3 Place bottle securely in sampling pole and unscrew lid just prior to sampling. 7.4 Lower sample bottle into incoming surf, and with a sweeping motion collect the ocean water avoiding sand. Leave ample air space in the bottle (at least 2.5 cm) to facilitate mixing by shaking. Recap bottle. JWPCP Water Quality Laboratory SMSP- 6 Version 13.1.0 App 3.2 - 7 September 10, 2013 7.5 Collect a scheduled duplicate sample immediately after the initial sample in a sterile 1000 mL polypropylene bottle to ensure sufficient volume for all tests. 7.6 Label all sample bottles with the sample location, date, time, and the sampler’s initials. 7.7 All bacteriological samples shall be iced (<10°C) during transport to the laboratory and processed within 6-hours of collection time. 7.8 If vehicle access to a sampling location is blocked, park in a safe location and access the site by foot. If there is no foot access and the delay is anticipated to be longer than 30 minutes, complete the remainder of the beach run and return to the missed sample site. 7.9 A station may be omitted for reasons of personal safety or unreasonable time delay; however, the technician shall make a reasonable attempt to collect each sample – up until 15:00 that day. The supervisor shall be informed of the delay. 7.10 In the event of stormy weather that makes sampling hazardous or impractical, the samples can be omitted, provided that such omissions do not occur more than 10 days in any calendar year. 7.11 When a sample is omitted, a detailed explanation shall be recorded in the Remarks portion of the Weekly Shore Station Observations Sheet. The supervisor shall be informed of the omission immediately. 7.12 All shore samples shall be refrigerated after analyses until the tests results are known (within 24-hours). In the event the results are lost or questionable, the refrigerated samples shall be reset. However, data from these samples are not reportable (in violation of the 6-hour holding period) but are valuable for characterizing the water quality. Appropriate footnote shall be entered with non-reportable results. The supervisor shall be informed of the incident. Daily White Point Manifold Sample Collection and Handling: 7.13 Sampling procedure for daily manifold samples for FIB and total chlorine residual. 7.13.1 Access the locked manifold security gate and cover with District’s key #A297. 7.13.2 Open the manifold cover, and place the two rubber tubes that are attached to the 90-inch and 120-inch pumps into the drain hole. Completely open the two valves. 7.13.3 Push the buttons to switch on the pumps. The left-hand button is for the 120-inch line, and the right-hand button is for the 90-inch line. The lines must be cleared of standing water prior to collecting the samples JWPCP Water Quality Laboratory SMSP- 7 Version 13.1.0 App 3.2 - 8 September 10, 2013 (approximately 5 minutes flush time before collection). See the White Point Manifold Flow Table (Table 1) for the required pre-sample flush time for each line. 7.13.4 After the lines are flushed, aseptically open a Whirl-Pak® sampling bag containing sodium thiosulfate pill, and fill the bag to the 4 oz. fill line with the 120-inch line sample. Close the bag securely and label it with the sample name, date and time, and sampler’s initials. Gently agitate filled bag to dissolve and mix the sodium thiosulfate pill into the sample. Keep the sample iced. 7.13.5 Immediately after the bacteriological sample is collected, collect the chlorine residual sample from the 120-inch line by filling the pre-labeled 100 mL amber glass bottle. Record the collection time and analyze the sample for chlorine residual immediately (DPD Method SM4500-Cl G). 7.13.6 Repeat steps 4.1.4 and 4.1.5 for the 90-inch line. 7.13.7 Duplicate chlorine residual analysis is done daily. Also, any sample with chlorine residual of 0.4mg/L or greater must be verified by a second analysis. 7.13.8 Chlorine residual of 1.0 mg/L or greater must be reported to the Assistant Superintendent Treatment Plant Operations who is in charge of the chlorination processes. On weekends and holidays, the Alarm Center must be notified. 7.13.9 Close the valves and confirm the pumps are off before locking the manifold cover. Lock the access gate upon departure. 7.13.10 The analyst shall record sample collection times, when the samples were received by the lab and name of sampling analyst on the Daily Bacteriological & Chlorine Residual Sample Collection form. Weekly Shore Station Run: 7.14 The shore run is split by two technicians due to numerous sites for various sampling and field data purposes. The long run covers SM, SMB-O-9, SB, S1 and S2. The short run covers S7, S6, S5 (including manifold and rain gauge) and S3. 7.15 The technicians take the electronic tablet to input the shore run observations. Upon returning to the lab, the data is synchronized with the LIMs. 7.16 The Microbiology truck is used for the long runs, and a Process Control truck is borrowed for the short runs. In an event where a truck is not available, a plant truck shall be obtained from the mechanic shop. 7.17 Splitting runs might not be possible on some days, e.g. insufficient staff. The technician must be prepared to cover the entire run when necessary. JWPCP Water Quality Laboratory SMSP- 8 Version 13.1.0 App 3.2 - 9 September 10, 2013 7.18 Cell phones shall be carried out on the shore runs by both technicians. A spare cell phone is available from Process Control Lab. Weekly Shore Station Observation: 7.19 Weekly Shore Station Observations for specified parameters shall be recorded at the same time bacteriological samples are collected. Observations are selected from the drop-down menu options with standardized descriptions. All sections shall be completely filled out prior to submittal. Remarks shall be worded succinctly and uniformly. If there are problems with the electronic tablet, the analyst must fill out a temporary Weekly Shore Station Observation Sheet manually. The following guidelines shall be maintained: 7.20 Air Temperature, Wind, Tide and Weather – These observations pertain to conditions as recorded at S7, Cabrillo Beach Life Guard Station, at time of sampling. 7.20.1 Air Temperature – Taken with a hand-held thermometer (Fahrenheit) at the sampling site. 7.20.2 Wind Speed and Direction – Taken with a hand held wind meter (MPH), away from obstructions and aimed towards the direction of the wind. If no wind is detected enter none detected in the wind category. 7.20.3 Tide – Calculated by Tides and Currents Program. Report the tide height in feet and the tidal action as ebbing or flooding, based on the time S7 sample is taken. 7.20.4 Weather – Select description of the weather at time of sampling. 7.20.5 Rain during sampling – Select yes or no. 7.21 Time – The time each sample is collected. 7.22 Water Color – The general color of the water in the sampling area. 7.23 Turbidity – The clarity of the water when sampled. 7.24 Odor – The presence or absence of odor at the sampling site. When odor is detected, the description of the odor and its possible source shall be recorded in the Remarks section. 7.25 Sewage Grease – Sewage grease shall be quantified as cubic centimeters per 100 feet of beach (cc/100ft), bagged and transported to the laboratory. 7.26 Fecal Matter – Possible source of origin shall be recorded in the Remarks section. 7.27 Sewage Garbage –Description shall be recorded in the Remarks section. JWPCP Water Quality Laboratory SMSP- 9 Version 13.1.0 App 3.2 - 10 September 10, 2013 7.28 Tar/Oil – Tar and bilge oil shall be quantified as cubic centimeters per 100 feet (cc/100ft). 7.29 Garbage – Quantify non-sewage garbage present on and/or offshore near sampling site. 7.30 Kelp Deposits – Quantify kelp deposits on and/or offshore, near sampling site. 7.31 Bathers in Water – Approximate number of persons in direct contact with ocean water. 7.32 Bathers Onshore – Approximate number of persons at or near the shoreline. 7.33 Rain gauge – The rain gauge is located at the Paseo del Mar pumping station just north of White Point, at Paseo del Mar. The rain gauge shall be checked when rainfall is noted in the past 24-hours. The following guidelines shall be maintained: 7.33.1 Access the locked security gate to Paseo del Mar pumping station with District’s key #A297. 7.33.2 Lift off the funnel and insert the graduated dipstick into the center cylinder. 7.33.3 Read the dipstick to the hundredth of an inch. Record the rainfall and the time it was measured, e.g. 0.12 inches @ 09:15. 7.33.4 When the rainwater collected in the center cylinder overflows into the housing cylinder, carefully remove the center cylinder and discard the rainwater. Carefully pour the excess rainwater in the housing cylinder into the emptied center cylinder and immerse the dipstick to measure. Add 2 inches to this measurement for the full rain measurement. The center cylinder holds 2 inches of water when full. 7.33.5 Discard the rainwater and reassemble the rain gauge, storing the dipstick upside-down in the main housing cylinder. 7.33.6 Lock access gate upon departure. 7.34 Remarks – Additional comments, clarifications, and quantifications (e.g. sewage grease) are entered in this section. Presence of diatomaceous scum, approximate number of birds or mammals in the sampling area, unusual runoff situations, explanation of odors, approximate distance of boats within 200 yards of shore are examples of noteworthy remarks. 7.35 Observations By – Enter the first name initial and last name of the technician. Once the analyst returns from the field, the electronic tablet data is synchronized with the LIMs system. JWPCP Water Quality Laboratory SMSP- 10 Version 13.1.0 App 3.2 - 11 September 10, 2013 8. Calculations: not applicable. 9. Quality Assurance guidelines 9.1 9.2 Each shore run will include one sample for duplicate analysis 9.1.1 Follow the list in the back of the bench book to determine the proper sample for duplicate analysis each week. 9.1.2 Sample number for duplicate analysis is planned in order to assure that samples are all checked by duplicate analysis with equal frequency. 9.1.3 To collect for duplicate analysis, use a 1L sterile polypropylene bottle to collect the designated sample. Extra volume is necessary for the extra testing. Quarterly manifold pump maintenance to check flow rate: 9.2.1 Turn the valve to the 90-inch line completely open and fill the 20-liter carboy to the 20-liter mark. 9.2.2 Record the time it takes to fill the carboy to 20 L. 9.2.3 Empty the carboy and repeat the procedure with the 120-inch line. 9.2.4 Compare the recorded times to the White Point Manifold Flow Table (Table 1) to determine if the flow rates are in the acceptable range. 9.2.5 If the flow rate is not within the acceptable limit, a work request must be immediately submitted to the JWPCP Maintenance section. Microbiology Group supervisor shall be informed of the problem. 9.2.6 Record the flow rate check in the designated section of the Microbiology Laboratory Bacteriological Notebook. 10. Method Performance: not applicable. 11. References 11.1 County Sanitation Districts of Los Angeles County, Joint Water Pollution Control Plant NPDES Permit (NPDES Permit No. CA0053813), 09/01/11 11.2 Santa Monica Bay Beaches Bacterial TMDLs Coordinated Shoreline Monitoring Plan, Technical Steering Committee, City of Los Angeles and County of Los Angeles, 4/07/04. JWPCP Water Quality Laboratory SMSP- 11 Version 13.1.0 App 3.2 - 12 September 10, 2013 11.3 Thomas Bros. Maps, The Thomas Guide Los Angeles County 2000 Edition, 1999. JWPCP Water Quality Laboratory SMSP- 12 Version 13.1.0 App 3.2 - 13 September 10, 2013 TABLE 1 WHITE POINT MANIFOLD FLOW TABLE The flow rate timetable is based on the following parameters: • sample piping is ¾ inch thinwall tube • I.D. is 0.680 inches • test carboy is 20 liters (5.25 gallons) • 90-inch line: length of 76.81 ft. and volume of 1.44895 gal. • 120-inch line: length of 44.86 ft. and volume of 0.84631 gal. Pre-sample Flush TIME min:sec gpm 00:45 00:50 00:55 01:00 01:05 01:10 01:15 01:20 01:25 01:30 01:35 01:40 01:45 01:50 01:55 02:00 02:05 02:10 02:15 02:20 02:25 7.05 6.34 5.76 5.28 4.88 4.53 4.23 3.96 3.73 3.52 3.34 3.17 3.02 2.88 2.76 2.64 2.54 2.44 2.35 2.26 2.19 ft/s 6.22 5.60 5.09 4.67 4.31 4.00 3.73 3.50 3.30 3.11 2.95 2.80 2.67 2.55 2.44 2.33 2.24 2.15 2.07 2.00 1.93 90-inch 120-inch 02:03 02:17 02:31 02:45 02:58 03:12 03:26 03:39 03:53 04:07 04:21 04:34 04:48 05:02 05:15 05:29 05:43 05:56 06:10 06:24 06:38 01:12 01:20 01:28 01:36 01:44 01:52 02:00 02:08 02:16 02:24 02:32 02:40 02:48 02:56 03:04 03:12 03:20 03:28 03:36 03:44 03:52 WRITE WORK ORDER! FAIL! White Point Manifold Sample Maintenance Manifold flow rate is required to be at least 2.00 ft/s, based on a previous NPDES permit specification. A work order must be requested prior to such reduced flow speed. When the flow test does not fill the 20-liter carboy within 1 minute and 54 seconds, a work request must be submitted to the JWPCP Maintenance section. The EID number is 348MDF00 for manifold structures and outfalls. The Microbiology Supervisor shall be informed of the problem before submittal. JWPCP Water Quality Laboratory SMSP- 13 Version 13.1.0 App 3.2 - 14 September 10, 2013 Appendix 3.3 LACSD Nearshore Bacteriological Sampling Field and Safety Procedures CSDLAC NEARSHORE BACTERIOLOGICAL SAMPLING FIELD AND SAFETY PROCEDURES Using R/V Phaon DMS #1265842-v4-PhaonNearPRO.doc modified 08 Oct. 2015 INTRODUCTION Nearshore bacteriological sampling is conducted at nine stations along the Palos Verdes Peninsula. Six “Inshore” stations (IL2-IL7) are located along the 9.1 m contour and are typically sampled five times per month and at least once per week. The sampling run is extended to include three “Offshore” sites (6C, 8C, 9C) once per month. Separate surface and bottom water samples are collected at each Inshore station and surface samples only are taken at the Offshore sites. All samples are collected with a Niskin bottle. Samples are kept on ice and returned to the Microbiology Laboratory at JWPCPWQL for analysis. A minimum of two people is required to conduct the sampling. MOBILIZATION Prior to each day's sampling and before leaving the dock check to see that the following equipment and supplies are on board or taken down to the survey vessel: 1. Fifteen 500 ml and two 1 L autoclaved Nalgene bottles 2. Ice chest and ice (ice is stored in the Ocean Sentinel freezer) 3. Pre-printed adhesive labels 4. Alcohol wash carboy with approximately 10 L of 50:50 ethanol/seawater solution 5. Wash bucket 6. Niskin bottle (1.2 L) with messenger (plus spares of each) 7. Bucket thermometer 8. Ocean Nearshore Station Observations sheets 9. Phaon Cell phone (located on Ocean Sentinel) Make sure there are an adequate number of sampling bottles available for the bacteriological run. Twelve 500 ml bottles are required for the regular sampling run (six stations) and 15 bottles are required for the extended run (nine stations). At least two 1 L bottles may be needed for the Split samples. Split samples are taken in lieu of replicates and are split in the laboratory for testing of two analytes. Autoclaved sample bottles are obtained from the JWPCPWQL Microbiology Laboratory. Check with the Microbiology staff to insure that the bottles have been properly sterilized and are ready for sampling. Processed bottles will show black indicator lines on the autoclave tape and must be checked by Microbiology staff for sterilization two days after the date written on top of the bottle. Pre-printed adhesive labels should be made up at least the day before the scheduled run. Labeling instructions are below. Upon arrival at the Phaon, an operator will set up the vessel per the posted "Boat Set-Up and Safety Procedures”. Once the boat is set up, make sure all necessary gear is on board and operational. There are back ups for all gear if necessary. The alcohol wash should be checked for sufficiency; enough to cover half the Niskin bottle. If a sufficient level is not met, add more ethanol to the existing alcohol wash solution. Note: Alcohol is flammable and care should also be taken to avoid eye contact when transferring the alcohol 1 App 3.3 - 1 between the carboy and the wash bucket and while immersing the Niskin bottle. A fresh batch of alcohol wash solution should be made, minimally, on an annual basis in July. Personal floatation vests are available to anyone desiring their use. The boat operator may require floatation vests be worn if he/she deems conditions warrant their use. Noise cancellation headphones are available for engine noise reduction. SAMPLING PROCEDURES During a regular sampling run, surface and bottom samples are to be taken at each of the six, 9.1 m, Inshore stations (IL2-IL7). During the extended sampling run, surface samples only are taken at the Offshore stations 6C, 8C, and 9C, which are along the 60 m contour. The sampling crew must depart on the run as soon as possible after the start of working hours. Samples must be received at the Microbiology Lab no later than 1200 hours and within six hours of the time the first sample is taken. Four hours should be considered the goal. Sampling typically begins at the station furthest from port. During an extended run the offshore sites (9C, 8C, 6C) are sampled in-route to station IL2. Weather and sea conditions may occasionally require the reverse order. Stations are to be located by means of DGPS. Visual line-ups and fathometer readings are to be used to confirm position. All Inshore stations, as established in the permit, are located along the 9.1 m depth contour. However, if kelp is present at a site, sampling may take place further offshore at the outside edge of the kelp canopy. Foul weather, rough seas, or the presence of hazardous reefs may also necessitate sampling slightly offshore of the 9.1 m contour. In conditions of strong current or high winds the boat is to be anchored during sampling. The cap rail is very narrow, so care should be taken when walking fore and aft from anchor deployment and retrieval. To the extent practical (and with the exception of conditions discussed in the preceding paragraph), the anchor should be placed so as to position the vessel in 9.1 m (30 feet) depth at mean lower low water or at the outer edge of the kelp bed. Surface water temperature (°C) is to be determined by means of a bucket thermometer at each station. Surface samples are to be taken 0.5 m below the surface and bottom samples are to be taken within two meters of the seabed. Samples are taken with a Niskin bottle attached to a line weighted with a salmon ball. The Niskin bottle is to be completely immersed in an alcohol wash prior to sampling and between stations. Care is to be taken to assure that the valves are exposed to the alcohol disinfectant wash. Disinfection is not necessary between surface and bottom samples taken at each station. The surface sample is to be taken before the bottom sample. If samples are not taken in this order the Niskin bottle must be rewashed in disinfectant between the samples. Upon arriving at station, prepare the Niskin bottle to take a sample by opening both the bottom and top caps and attaching the lines to the triggering mechanism. Attach the Niskin bottle to the line approximately one meter above the salmon ball. Lower salmon ball into the water just below the water surface; placing the salmon ball just below the surface will prevent excessive swinging motion caused by back and forth listing of the vessel. The messenger can then be attached to the line above the Niskin bottle. While holding the messenger, which is attached to the line, lower the bottle to the respective depth. The bottle is triggered to close by dropping the messenger, which will slide down the line and make contact with the triggering mechanism. Care should be taken that the messenger is properly attached by sliding it up and down on the line prior to release. Fill a sterile 500 ml or 1 L Nalgene sample bottle to the shoulder of the container. Upon 2 App 3.3 - 2 completing sampling at a station, carefully bring the salmon ball back on board the vessel. Remove the Niskin bottle and place the opened sampler in the disinfectant alcohol wash, exposing top and bottom to the alcohol. Each sample is to be labeled by means of an adhesive label placed on the side of the bottle. The label is to list the station name and sampling date, time, depth (Surface or Bottom), split (Yes or No), and personnel. Samples are to be refrigerated or kept on ice (ideally at 4°C) until delivery to the Microbiology Laboratory. An Ocean In/Offshore Station Observations Sheet is to be completed for each sampling run. All boxes of the Station Observations Sheet must be completed. The Observations Sheet also serves as a Chain of Custody form when samples are turned over to the JWPCP Microbiology Lab. See a completed example below: 3 App 3.3 - 3 DEMOBILIZATION All over-the-side gear must be washed with fresh water upon return to the dock and stowed carefully for the next sampling. Samples are to be transported to the lab as soon as possible upon arrival back to the dock. Samples must be received at the Microbiology Lab no later than 1200 hours and within six hours of the time the first sample is taken. Fours hours should be considered the goal. A copy of the Ocean Nearshore Observations Sheet is to be given to the Microbiology Lab with the appropriate signatures. The original data sheet is filed in the Marine Biology Lab. On a weekly basis the Ocean Nearshore Observations Sheet will be checked for accuracy and signed by a QA/QC officer. At the end of the month the Field Sheets are transcribed electronically to files LEMMYY.xls (MM= two digit month code, YY= two digit year code). The file is then sent to an Engineering Technician [at the time of this writing, Lysa Gaboudian ([email protected]) and Brittany Lui ([email protected])]. These are to be incorporated into a JWPCP Monthly Report. The data is also reported annually in the Annual Palos Verdes Ocean Monitoring Report data dump and biennially in the Biennial Palos Verdes Monitoring Report for trends and spatial analysis. 4 App 3.3 - 4 LABEL PROCEDURES The label file for sample bottles is preformatted and located at the OMRG DM5 site Ocean Monitoring\ labels\bactee and is pre-organized for each month. These monthly files can be modified for each upcoming month’s of sampling by inserting the new date, personnel, and sample split designation as needed. Save changes with new file name that includes the current year. These labels are to be printed only on the PolyPaper Laser Paper label sheets. Avery brand label sheets are not to be used, as they cannot be easily removed from bottles after sampling. The PolyPaper labels are found in the MBL drawer underneath the printer. Additional supply of this paper can be purchased thru the San Jose Creek’s stock room from VWR (item # 6314-0020). The Microbiology Laboratory no longer requires replicate samples. In lieu of this the larger bottles previously used for the replicates samples are now used as a Split sample. The following replicate regime will still be used for the Split samples: 5 App 3.3 - 5 June (Split samples) Inshore sampling #1………….IL2B and IL5S Inshore sampling #2………….IL7S Inshore sampling #3………….9C---example of sequence only Inshore sampling #4………….IL6B Inshore sampling #5………….IL3B and IL4S July (Split samples) Inshore sampling #1………….IL2S Inshore sampling #2………….IL4B and IL6S Inshore sampling #3………….IL5B Inshore sampling #4………… 6C---example of sequence only Inshore sampling #5………….IL3S and IL7B August (Split samples) Inshore sampling #1………….IL2B and IL5S Inshore sampling #2………….8C----example of sequence only Inshore sampling #3………….IL7S Inshore sampling #4………….IL6B Inshore sampling #5………….IL3B and IL4S September (Split samples) Inshore sampling #1…………. IL2S Inshore sampling #2…………..9C---example of sequence only Inshore sampling #3…………. IL4B and IL6S Inshore sampling #4…………. IL5B Inshore sampling #5…………. IL3S and IL7B October (Split samples) Inshore sampling #1………….IL2B and IL5S Inshore sampling #2………….IL7S Inshore sampling #3………….IL6B Inshore sampling #4………….IL3B and IL4S Inshore sampling #5…………..6C---example of sequence only November (Split samples) Inshore sampling #1……….….IL2S Inshore sampling #2…………..8C---example of sequence only Inshore sampling #3…………. IL4B and IL6S Inshore sampling #4…………. IL5B Inshore sampling #5…………..IL3S and IL7 December (Split samples) Inshore sampling #1………….IL2B and IL5S Inshore sampling #2………….IL7S Inshore sampling #3………….IL6B Inshore sampling #4………….IL3B and IL4S Inshore sampling #5………….9C---example of sequence only 6 App 3.3 - 6 January (Split samples) Inshore sampling #1……….….6C---example of sequence only Inshore sampling #2…………. IL2S Inshore sampling #3…………. IL4B and IL6S Inshore sampling #4…………. IL5B Inshore sampling #5…………..IL3S and IL7B February (Split samples) Inshore sampling #1………….IL2B and IL5S Inshore sampling #2………….IL7S Inshore sampling #3………….IL6B Inshore sampling #4………….IL3B and IL4S Inshore sampling #5……….....8C---example of sequence only March (Split samples) Inshore sampling #1……….….9C---example of sequence only Inshore sampling #2…………. IL2S Inshore sampling #3…………. IL4B and IL6S Inshore sampling #4…………. IL5B Inshore sampling #5…………..IL3S and IL7B April (Split samples) Inshore sampling #1………….IL2B and 5S Inshore sampling #2………….IL7S Inshore sampling #3………….IL6B Inshore sampling #4………….IL3B and IL4S Inshore sampling #5……...…..6C---example of sequence only May (Split samples) Inshore sampling #1…………. IL2S Inshore sampling #2…………. IL4B and IL6S Inshore sampling #3…………. 8C---example of sequence only Inshore sampling #4…………. IL5B Inshore sampling #5…………..IL3S and IL7B 7 App 3.3 - 7 Appendix 3.4 Total Coliform, Fecal Coliform, and Enterococcus Enumeration by Membrane Filtration – (Method 349 – Total Coliform, Method 356 – Fecal Coliform, and Method 357 – Enterococcus) and Fecal Coliform Enumeration by Multiple Tube Fermentation – (Method 351) Sanitation Districts of Los Angeles County Laboratories Section METHOD APPROVAL FORM Test Code 349 Method Name Total Coliform Enumeration by Membrane Filtration Version 13.1.0 Method Date September 10, 2013 Reasons for Method Revision Standard Annual Revisions Revised by: Tuan Lai Laboratory Technician JWPCP WQL Date Debra Leachman Microbiologist II JWPCP WQL ' *VW\ b Date Approved by: Kathy Walker Supervisor I JWPCP WQL ignatun () £&J 9U o f 11 Date Final Approval: Jean Lee Superintendent of JWPCP Laboratory Signature App 3.4 - 1 Date 349. TOTAL COLIFORM ENUMERATION BY MEMBRANE FILTRATION INTRODUCTION The total coliform group is defined as facultative anaerobic, gram-negative, non-spore-forming, rod-shaped bacteria that typically develop red colonies with a partial or entire metallic sheen surface within 24 h at 35ºC on an Endo-type medium containing lactose. This sheen production results from a lactose fermentation by-product (acetaldehyde) and the Schiff’s reagent, present in the mEndo media (SM 9222B). Wastewater, fresh and marine receiving water may be analyzed for total coliforms using the membrane filtration method. The membrane filtration method allows for greater reproducibility than the multiple tube fermentation method and confirmed results can be obtained in 24 hours. 1. 2. Scope and Application 1.1 This procedure is applicable for use with treated wastewater, fresh and marine receiving waters. 1.2 Solids and other background interference present in the sample must be considered when determining the applicability of the test. 1.3 The two-step enrichment procedure must be used to aid recovery of stressed coliforms from secondary chlorinated wastewater effluent. 1.4 Results ranging from 1 to 9 are reported to 1 significant figure, and results 10 or greater are rounded to 2 significant figures. Summary of Method 2.1 Sample aliquot is filtered through a membrane filter. 2.2 The filter is rolled onto an absorbent pad saturated with lauryl tryptose broth and incubated for 1.5 to 2 h at 35ºC. This constitutes the enrichment step. 2.3 The filter is transferred to mEndo agar and incubated for the remaining 20 to 22 h at 35 ± 5ºC. Total incubation time is 22 to 24 h. 2.4 The filter is examined under fluorescent light and magnification. All red colonies exhibiting green or golden metallic sheen are counted as total coliform. 2.5 Results are reported as total coliform colony forming units (cfu) per 100 mL of sample. JWPCP Water Quality Laboratory 349-1 Version 13.1.0 App 3.4 - 2 September 10, 2013 3. 4. Sample Handling and Preservation 3.1 Sampling schedules must be planned to ensure that testing is done immediately after the samples are delivered to the lab, ideally within 2 h. Samples collected in the field that are not analyzed immediately must be iced or refrigerated at < 8°C during transit to the lab. The holding time for samples may not exceed 6 h. 3.2 After each sample is collected the analyst records various observations, including time of collection, electronically onto a PDA. When the analyst returns to the laboratory a hotsync is performed on the PDA, and an observation sheet(s) is printed, signed and filed. The signed observation sheet is the chain of custody form for the samples. 3.3 Once the samples arrive back to the laboratory, an analyst must measure and record the temperature of a randomly selected sample, using a Raytek® laser temperature probe or other similar external device. 3.4 Samples are collected in polypropylene bottles that have been thoroughly washed and sterilized. Prior to use, sample bottles must pass a 48 h TSB sterility check. 3.5 Bottle size should allow for adequate sample volume with sufficient headspace for thorough mixing. Appropriate labeling must include sample location, date/time and sampler’s initials. 3.6 Shore samples must be held refrigerated until final results are known. 3.7 Chlorinated effluent samples must be chlorine neutralized for bacteriological analysis. Sterile Whirl- pak® bags that contain 10 mg sodium sulfate pill are used to collect chlorinated samples. Total chlorine residual is analyzed from a separate grab without sodium sulfate pill to measure the effluent chlorine level and to ensure the sodium sulfate pill will neutralize the chlorine concentration present in the sample. Interferences 4.1 The presence of solids and turbidity may cause clogging of the membrane filter. If the solids interference cannot be diluted out because coliform density is low, then the multiple tube fermentation test must be substituted. 4.2 Samples with high background concentrations may overgrow coliform organisms. Reducing sample aliquots or setting serial dilutions may reduce this interference. JWPCP Water Quality Laboratory 349-2 Version 13.1.0 App 3.4 - 3 September 10, 2013 4.3 5. Bacterial clumping may result in false low coliform determinations. This effect may be reduced by vigorous agitation of the sample prior to analysis. Apparatus 5.1 Incubator, capable of holding a temperature range of 35 ± 0.5ºC 5.2 Waterbath, capable of holding a temperature range of 44.5± 0.2ºC 5.3 Stereoscopic dissecting microscope (10× or 15×) and cool white fluorescent lamp 5.4 Hand tally (periodically calibrated) 5.5 Vacuum source 5.6 Vacuum filter flasks, safety coated (2 liter and 1 liter in sequence) 5.7 Sterilized filtration units, funnel and filter holder 5.8 UV sterilizer with short-wave (254 nm) germicidal lamp 5.9 Bunsen burner 5.10 Ethanol in wide mouth cup for flaming forceps 5.11 Forceps with flat ends 5.12 Sterilized graduated cylinders (50 mL) 5.13 Sterile pipets, 1 and 10 mL, cotton plugged, graduated or serological 5.14 Sterile petri dishes, loose lids, 60 × 15 mm 5.15 Manifold for multiple filtration units 5.16 Sterile membrane filters with grid, white, 47 mm diameter, 0.45µm pore diameter, e.g., Millipore type HA 5.17 Sterile absorbent pads for enrichment step, i.e., Pall® 47 mm sterile absorbent pads. 5.18 Sterilized Guth dispensing bottle(s) 5.19 Platinum loop / needle or sterile, disposable, plastic loop / needle JWPCP Water Quality Laboratory 349-3 Version 13.1.0 App 3.4 - 4 September 10, 2013 6. 5.21 12 × 75 mm sterile disposable test tubes with snap caps 5.22 16 × 125 mm disposable test tubes with screw caps 5.23 Test tube racks for holding 13 mm / 16 mm tubes 5.24 Aluminum foil 5.25 Plastic disposable transfer pipets 5.26 Pipet bulb 5.27 Sterilized amber reagent bottle for ONPG reagent 5.28 Reagent bottles for toluene and 0.85% NaCl physiological saline Media/Reagents 6.1 Thoroughly review MSDS sheets for health and safety concerns prior to media or reagent handling. 6.2 Laboratory prepared media should be recorded in the Equipment/Media Preparation Laboratory Notebook, including all appropriate information such as manufacturer, lot, expiration date, quantity of dehydrated media used, quantity prepared, additives, pH, autoclave cycle, controls and analyst initials. 6.3 Laboratory Pure Water, Deionized Water. Water that has passed through a reverse osmosis system and deionizing resins so that it meets the Standard Methods performance specifications for “medium-quality” reagent water (Standard Methods Online Editions, 1080C, Table 1080:II). Additionally, it must pass the Standard Methods performance specifications for water used in microbiological testing (Standard Methods Online Editions, 9020B.4.d, Table 9020: II). 6.4 Phosphate Buffered Solution. Sterile buffered solution is used to rinse down filtration unit between subsequent aliquots of the same sample. Phosphate buffered solution is also used for dilution blank preparation. 6.4.1 Stock Phosphate Buffer Solution. Add 34.0 g potassium dihydrogen phosphate (KH 2 PO 4 ) to 500 mL laboratory pure water and mix. Adjust pH to 7.2 ± 0.5 with NaOH and bring volume to 1 L. Label the bottle with reagent name, manufacturer’s name, lot number, preparation date, expiration date, and analyst initials. Autoclave at 121ºC for 15 min. After JWPCP Water Quality Laboratory 349-4 Version 13.1.0 App 3.4 - 5 September 10, 2013 completely cooling bottle to room temperature, aseptically inoculate 20 mL of stock phosphate buffer solution into a 100 mL TSB media bottle. Incubate the TSB bottle at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. Discard solution if the TSB bottle becomes turbid. Store refrigerated and handle aseptically. Discard if turbidity is present or after 3 months of use. 6.4.2 Magnesium Chloride Solution. Add 81.1 g magnesium chloride MgCl 2 ·6H 2 O to 1 L laboratory pure water and mix to dissolve. Label the bottle with reagent name, manufacturer’s name, lot number, preparation date, expiration date and analyst initials. Autoclave at 121ºC for 15 min. After completely cooling bottle to room temperature, aseptically inoculate 20 mL of magnesium chloride solution into a 100 mL TSB media bottle. Incubate the TSB bottle at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. Discard solution if the TSB bottle becomes turbid. Store refrigerated and handle aseptically. Discard if turbidity is present or after 3 months of use. 6.4.3 Working Phosphate Buffered Solution. Add 50 mL magnesium chloride solution to 10 L of laboratory pure water in a carboy and mix thoroughly. Dispense the laboratory pure water containing magnesium chloride into 1 L or 2 L reagent bottles and cap loosely. Suspend a biological indicator in a separate 2 L bottle filled with laboratory pure water. This bottle is designated exclusively for quality control use and should be rotated to different areas in the autoclave with each batch. The label information should include the reagent name, preparation date, expiration date, analyst initials and bottle number, which identifies the bottle position in the autoclave. Cover each bottle cap with foil, label and autoclave tape. Autoclave at 121ºC for 60 min and record bottle positions in the Equipment/Media Preparation Book. Cool and tighten caps. Label and incubate biological indicator at 58-62ºC for 24 and 48 h (follow manufacturer’s directions). After completely cooling bottles to room temperature, aseptically add 1.25 mL stock phosphate buffer solution per 1 L sterile laboratory pure water containing magnesium chloride. Mix by inverting bottles several times. Record all preparation information in Equipment/Media Preparation Book. Final pH 7.2 ± 0.1. 6.4.4 Each batch of phosphate buffer is tested for sterility. Randomly select one bottle from the batch and aseptically inoculate 20 mL of phosphate buffered water into a 100 mL TSB media bottle. Also check the sterility of the stock phosphate solution by aseptically inoculating 10 mL of solution into a 50 mL TSB media bottle. Incubate the inoculated TSB bottles at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. If the TSB bottles becomes turbid, check biological indicator result, autoclave records and TSB batch QA. JWPCP Water Quality Laboratory 349-5 Version 13.1.0 App 3.4 - 6 September 10, 2013 Discard the entire batch. Discard stock phosphate solution if it fails QA. Store working phosphate buffer away from direct sunlight for up to three months. Discard if turbidity develops before three months. 6.4.5 Phosphate Buffer 9.0 mL Dilution Blanks: Add 1.25 mL stock phosphate buffer solution and 5.0 mL magnesium chloride solution per 1 L laboratory pure water and mix thoroughly. Adjust pH with 0.1N or 1.0N NaOH to achieve a final pH of 7.2 ± 0.1. Record all preparation information in the Equipment/Media Preparation Book. Dispense into calibrated 9.0 mL test tubes and label racks with reagent name, preparation date, expiration date and analyst initials. Attach autoclave tape to each rack and place a biological indicator to one of the racks, autoclave at 121ºC for 15 min. Record all autoclave information in Equipment/Media Preparation Book. Once phosphate buffered blanks have cooled to room temperature take the final pH using several phosphate buffer blanks. Visually check each tube’s calibration mark to ensure each tube has 9.0 ± 0.2 mL, and tighten caps. 6.4.6 Each batch of phosphate buffer blanks is tested for sterility. Randomly select 2 tubes from the batch and aseptically pour into a 100 mL TSB media bottle. Incubate the TSB bottle at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. If the TSB bottle becomes turbid, check autoclave records and biological indicator result. Discard the entire batch if quality assurance tests indicate problem to be autoclave related. If everything is normal, retest another 2 tubes from the batch in TSB. If the TSB is negative, keep the entire batch. If the TSB bottle turns positive, discard the entire batch. Store phosphate buffer blanks away from direct sunlight and discard if turbidity develops before the expiration date of 3 months for screw cap and 2 weeks for slip cap tubes. 6.5 Lauryl Tryptose Broth: lactose broth media used in the enrichment step to aid in recovery of stressed coliforms. Add 35.6 g lauryl tryptose (Difco) to 1 L of laboratory pure water and mix to dissolve. Transfer to smaller reagent bottles (i.e., 100 mL and 250 mL) and label bottles with reagent name, preparation date, expiration date and analyst initials. Autoclave at 121ºC for 15 min. Cool and tighten caps. Store at room temperature away from direct sunlight for up to three months. Final pH 6.8 ± 0.2. Positive and sterility controls are incubated for 24 h and 48 h at 35 ± 0.5ºC. Record all preparation information in the Equipment/Media Preparation Book. 6.6 mEndo agar LES. Confirmatory plate media used to select for total coliforms. Add 51.0 g mEndo (Difco) to 1 L of laboratory pure water containing 20 mL 95% non-denatured ethanol and mix to dissolve. Continue mixing and bring to a boil. Cool to approximately 55ºC and dispense 5-mL into 60 × 15 mm sterile petri JWPCP Water Quality Laboratory 349-6 Version 13.1.0 App 3.4 - 7 September 10, 2013 dishes with a sterile dispenser, such as a Unispense automatic dispenser with sterilized tubing. Dispensed medium should be a depth of 4 to 5 mm. Dispensed plates are covered to protect them from light and cooled until solidified. Prepared plates should be repackaged and labeled with reagent name, preparation date, expiration date and analyst initials. Store in refrigerator for up to two weeks. Final pH 7.2 ± 0.2. Prepare positive and negative controls as well as a minimum of 3 sterility controls or 1% of the plates set for each batch of media and incubate for 24 h at 35 ± 0.5ºC. Record all preparation information in the Equipment/Media Preparation Book. Note: mEndo is considered a respiratory irritant. Ethanol is highly flammable and should be handled with care. Nondenatured ethanol stock is to be stored in an inventory-controlled locked cabinet. Consult MSDS for details. 6.7 Tryptic Soy Agar (TSA) slants: all-purpose growth media. Add 40 g of dehydrated media to 1L laboratory pure water and mix to dissolve. Continue mixing and bring to a boil. Cool to approximately 55oC, dispense 5 mL into 16 × 125 mm screw cap test tubes, and loosely cap. Label racks with reagent name, preparation date, expiration date and analyst initials. Autoclave at 121oC for 15 minutes. Pour out a tube for final pH before media solidifies. Tilt racks so that the agar forms a slant length of approximately 6.3 cm and cool to solidify. Slant racks may also be used. Final pH 7.3 ± 0.2. Tighten down caps and store away from direct light at room temperature for up to 3 months. Prepare a positive control along with a minimum of 2 sterility controls or 1% of the tubes set for each batch of media and incubate for 24 h at 35 ± 0.5oC. Record all preparation information in the Equipment/Media Preparation Book. 6.8 1.0 M monosodium phosphate solution. Buffering agent for ONPG solution. Dissolve 13.8 g NaH 2 PO 4 ·H 2 O in approximately 80 mL of laboratory pure water, and adjust to pH 7.0 using appropriate concentrations of NaOH and bring volume to 100 mL. Label the bottle with reagent name, preparation date, expiration date and analyst initials. Store at refrigerated for 3 months. NOTE: Refrigerated reagent may crystallize and should be warmed up to 37oC before use (do not overheat). Record all preparation information in the Equipment/Media Preparation Book. 6.9 ONPG (o-nitrophenyl-β-D-galactopyranoside) solution. Reagent used to detect the enzyme β-D-galactosidase. Dissolve 0.24 g o-nitrophenyl-β-Dgalactopyranoside (ONPG) in 45 mL laboratory pure water that has been warmed to 37oC. Add 15 mL warmed 1.0M monosodium phosphate solution and mix to dissolve (solution must be colorless). Filter sterilize with Millex 0.22 μm filter Syringe Driven Unit. Label the bottle with reagent name, preparation date, expiration date and analyst initials. Store at 2-8°C in sterilized amber reagent bottle for up to 2 weeks. Warm sufficient reagent in a sterile ONPG tube to 37oC prior to use (do not overheat). Prepare positive and negative controls, along with sterility for each batch of ONPG solution and incubate for 24 h at 35 ± 0.5oC. JWPCP Water Quality Laboratory 349-7 Version 13.1.0 App 3.4 - 8 September 10, 2013 7. 6.10 BBLTM DrySlide Oxidase test. Commercially prepared test system used to determine the oxidase reaction of bacteria. Each disposable 2"×2" slide has four plastic-film reaction areas which contain the substrate N,N,N,- tetramethyl-pphenylenediamine dihydrochloride and ascorbic acid, a stabilizing agent. Examine each slide before use. The reaction area should be colorless. Store at 15-30oC and protect slides from light. Opened slide packets have an expiration date of one week. Positive and negative controls are used with each set of verifications. 6.11 Physiological saline, 0.85%. Dissolve 8.5 g NaCl in approximately 500 mL laboratory pure water. Bring volume up to 1 L in a 1-L volumetric flask and transfer to 1-L reagent bottle. Label the bottle with reagent name, preparation date, expiration date and analyst initials. Autoclave at 121oC for 15 minutes. Store refrigerated for up to 3 months. Warm to 37oC prior to use. Perform sterility control once physiological saline solution has cooled. Aseptically inoculate 20 mL of physiological saline solution into a 100 mL TSB media bottle. Incubate the TSB bottle at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. 6.12 Toluene, analytical grade. Aids in cell lysis, enhancing the liberation of β−galactosidase enzyme from coliform bacteria. Stock toluene is stored in a flammables storage cabinet. A small amount (no more than 40 mL), is labeled with a flammables warning and stored in the laboratories dehydrated media and reagents cabinet. 6.13 Biological indicator, Bacillus stearothermophilus spore suspension ampules. An unused ampule serves as a positive control, labeled and placed in the water bath on a monthly basis or sooner if a new lot is used. Store unused ampules at 2-8oC. Procedure 7.1 Sample aliquots and dilutions are predetermined and based on sample type. The optimal sample volume will yield 20-80 colonies per plate. The laboratory is currently using 0.5, 5.0, 20, and 50 mL aliquots to ensure that a range of 1-16,000 total coliform/100 mL may be calculated from marine receiving waters. 7.2 Aseptically insert sterile absorbent pads onto lid side of prepared mEndo plates and saturate with lauryl tryptose broth (approx. 1.5 mL). Label the bottom of each mEndo plate with the sample location and volume. Include a blank with each sample. Stack the labeled dishes starting with the largest aliquot and end with a sample blank on top. Cover plates until processing begins. JWPCP Water Quality Laboratory 349-8 Version 13.1.0 App 3.4 - 9 September 10, 2013 7.3 Aseptically set up to three sterile filtering apparatus into a manifold unit that is attached to a vacuum and waste collection system. 7.4 Aseptically transfer sterile phosphate buffered water to a sterile Guth bottle and label with reagent name. Record the phosphate buffer identification information in the laboratory data book. 7.5 Using flamed forceps, place a membrane filter, grid side up, on the mesh plate of the filter base (forceps tip should only touch outer rim of filter). Reseat and lock on filtering funnel. Rinse the interior of the funnel thoroughly with phosphate buffered water and draw a steady but continuous vacuum through the filter. Do not pull excess air through the filter membrane. 7.6 Using flamed forceps, carefully remove the blank membrane filter and place it grid-side up onto the lauryl tryptose broth-saturated absorbent pad. Manipulate the filter to ensure air is not trapped under the filter. This method is used for transferring blank and sample membrane filters. 7.7 Shake each sample bottle vigorously (approx. 25 times) prior to processing. 7.8 Each membrane filter should be pre-wet with buffer before adding sample. This allows the analyst to examine the filter to ensure it is seated correctly and not damaged. 7.9 Sample volumes of less than 10 mL should not be dispensed directly onto a filter. Dispense sample into filter funnel containing a small amount of buffer (~10 mL) and swirl for an even distribution. 7.10 Dispense the smallest volume or highest dilution of sample into each filtering funnel, and draw a steady vacuum through the filter, ensuring that there is no excess moisture left on the filter. Thoroughly rinse down the filtering unit with at least 30 mL of phosphate buffer and draw through. Remove the filter aseptically and transfer grid side up onto the lauryl tryptose broth-saturated pad until all of the dilutions are processed. Continue to process sample aliquots ending with the largest or least dilute sample volume. 7.11 After each sample has been processed, rinse the filtering units thoroughly with hot water followed by deionized water, and dry with lint-free wipes. The clean filtering units are sanitized for immediate reuse only. Place them in a UV sterilizing unit for a minimum of 4 min. 7.12 After all samples are processed, separately filter positive (Escherichia coli) and negative (Pseudomonas aeruginosa) controls. Incubate these plates with the processed samples. Use the appropriate dose that will yield individual colonies with characteristic colonial morphology on mEndo agar. JWPCP Water Quality Laboratory 349-9 Version 13.1.0 App 3.4 - 10 September 10, 2013 8. 7.13 Place the inverted plates containing filtered samples in a covered tray containing a wet paper towel to maintain a humid environment. Label the container with test name, date and time. Incubate at 35 ± 0.5ºC for 22 to 24 hr. 7.14 After initial incubation period, lift filter from the pad using sterile forceps and reposition grid side up onto the mEndo agar surface. Inspect for complete contact of filter surface to agar. Invert plates, return to container and continue incubation for a total of 22-24 h at 35 ± 0.5ºC. 7.15 Duplicate analyses are included with each batch processed and the duplicate schedule for the routine inshore, shoreline and manifold monitoring stations are scheduled on a monthly basis at a frequency of at least 10% of sample type. Calculations 8.1 Counting Colonies 8.1.1 After 24 h incubation, starting with the blank plate, examine for contamination or any notable changes on the filter or media. Examine and count plates set for each sample, starting with the highest dilution or lowest volume filtered, i.e., blank, 10-1, 1 mL, etc. 8.1.2 Use a stereoscopic microscope (10×-15×) with a white fluorescent light source to yield maximum visibility for identifying and counting coliform colonies. Adjust light to maximize sheen on colony surface. 8.1.3 A total coliform colony is characterized as a dark red colony with a partial or entire metallic green or golden sheen to its surface. This sheen is a result of an acid aldehyde complex (by-product of lactose fermentation) combining with the Schiff's reagent in the mEndo media. Count colonies using magnification and a fluorescent light source, record all colonies demonstrating this characteristic. 8.1.4 A separate nuclei or a fine line of contact can discern individual colonies that have grown into each other. Irregularly shaped colonies may result from turbidity or artifacts in the sample. 8.1.5 The use of a hand tally (counter) may aid in keeping track of higher counts, but it is important to calibrate the tally regularly. 8.1.6 Record all counts and any notable information in the laboratory bench book. Comments should include unusual conditions on the filter such as the presence of solids, artifacts, or high background counts. The condition JWPCP Water Quality Laboratory 349-10 Version 13.1.0 App 3.4 - 11 September 10, 2013 of the growth on the filter should also be noted. This may include poor sheen development, confluent growth, confluent areas or the presence of too many colonies to obtain an accurate reading. A record of positive and negative controls must be associated with each set of samples. 8.1.7 8.2 All incubated media must be autoclaved prior to disposal. Liquid waste can be dumped down the drain, and disposable materials can be discarded with the laboratory trash. Due to the possible inhibitory effect of colony crowding, and in order to maximize the confidence level of a total coliform concentration, statistically determined minimum and maximum ranges are used to calculate final results. Sample aliquots producing counts within the ideal countable range of 20-80 total coliform colonies must be used. If more than one aliquot yields a countable coliform range, then these results are calculated individually but reported as an arithmetic mean. The number of total coliform colonies from a sample dilution or volume can be used in the following equation to determine colony forming units per 100 mL of original sample volume. Total Coliform Colonies Counted × 100 = Total Coliform cfu/100 mL Volume of Sample Filtered (mL) 8.3 If there are no filters containing the countable range and the counts are less than 20, add all counts and divide by total volume. Report as CFU per 100 mL. Filters with inhibitory effects are reported as an estimated count and are excluded from the calculation. 8.4 8.3.1 If no colonies are present on any plate, divide one by the sum of all representative aliquots or dilutions (mL), multiply by 100 and report result as less than that value per 100 mL. 8.3.2 If the number of colonies is greater than the countable range maximum of 80 colonies from the smallest volume filtered, calculate the result using 80 and report the result as greater than that value. If the colony count is greater than 80, and the colonies are distinct, uncrowded and of characteristic morphology, the exact count may be used to calculate the result. Such a result is noted as an estimated count. 8.3.3 Plates with a total bacteria count exceeding 200 colonies (total coliform and non-total coliform colonies), are recorded as TNTC (too numerous to count) and not used to calculate a final concentration. For QA purposes, a sampling location may require duplicate sampling and analysis. This requires a split analysis of a single sample. A separate result is JWPCP Water Quality Laboratory 349-11 Version 13.1.0 App 3.4 - 12 September 10, 2013 calculated from each split analysis and the geometric mean is calculated. The single geometric mean result is used for reporting. 9. 8.5 Because verifications are part of the JWPCP Microbiology Laboratory quality assurance program and not applied to an entire sample count, percent verified results are not used to adjust reported results. 8.6 Concentrations of indicator organisms, such as total coliform, are expressed as colony forming unit (CFU) per 100 mL sample. The calculation is based on the theory that one characteristic total coliform colony represents one total coliform bacterium in the original sample. Quality Assurance 9.1 Verifications 9.1.1 Method validation is routinely applied to 5% of positive samples by verifying a target number of 10 colonies per aliquot used in the sample calculation. Although this total coliform membrane filtration test is based on a lactose fermentation reaction signaled by the formation of colonial sheen production (SM 9222B), the combined cytochrome oxidase/onitrophenyl-β-D-galactopyranoside verification method was selected because it verifies a coliform bacteria based on the presence of the coliform specific enzymes cytochrome oxidase and β-D galactosidase. 9.1.2 Perform biochemical verification on 5% of each type of sample set per month for typical coliform colonies. For atypical coliform colonies, set verifications on at least one sample per month. In order to evaluate false positive and false negative trends adequately, atypical verifications may be substituted for typical verifications as needed. Atypical colonies have no metallic sheen and can be dark red, mucoid, or nucleated. 9.1.3 For each sample to be verified, select colonies from mEndo plate(s) that have been used to report the final result. Using sterilized needles or loops, pick approximately 10 isolated typical coliform colonies from one quadrant of the plate(s) and streak onto individual TSA slants. Using the single quadrant approach improves the chance for randomizing colony selection. Systematically add additional quadrants as necessary. 9.1.4 Include both positive and negative controls with each set of verifications. Streak Escherichia coli (positive control) and Pseudomonas aeruginosa (negative control) onto TSA slants and include along with test colonies. Label rack with I.D. numbers, sample date, set date, location, control JWPCP Water Quality Laboratory 349-12 Version 13.1.0 App 3.4 - 13 September 10, 2013 information and analyst initials. Record corresponding information in bacteriological data book. Incubate at 35 ± 0.5ºC for 18-24 hours. 9.1.5 9.1.6 Cytochrome Oxidase Test 9.1.5.1 The cytochrome oxidase (CO) test is used to determine the presence of the cytochrome oxidase enzyme. With the exception of Plesiomonas shigelloides, the entire Enterobacteriaceae family is cytochrome oxidase negative. Therefore, if a colony yields a positive CO reaction, the colony is not verified as a total coliform and the ONPG verification step is unnecessary. 9.1.5.2 Remove sufficient DrySlides from the packet and examine prior to use. The reaction areas should be colorless to light green. Using a sterile loop, remove a portion of the growth from each TSA slant and rub the inoculum directly onto the reaction area of the DrySlide Oxidase slide (each reaction area can accommodate up to 4 tests). 9.1.5.3 Examine the reaction area for the appearance or absence of a dark purple color within 20 seconds. Oxidase-positive organisms produce a dark purple color within 20 seconds while oxidasenegative organisms produce no color change or a change to light gray within the 20-second test period. Note: Color development after 20 seconds should be disregarded. Any unclear results should be repeated using a new reaction site on the slide. 9.1.5.4 Positive and negative controls must be run with each verification set. Escherichia coli is negative for cytochrome oxidase and Pseudomonas aeruginosa is positive for cytochrome oxidase. Control results deviating from the expected reactions negate the verification test and an immediate review of the verification process should be done. 9.1.5.6 Record cytochrome oxidase results for each colony in the bacteriological data book. Any comments or unusual results should be noted in the comment section. ONPG Test 9.1.6.1 JWPCP Water Quality Laboratory The ONPG test is used to demonstrate the presence or absence of the enzyme β-galactosidase using the organic substrate onitrophenyl-β-D-galactopyranoside (ONPG). This lactoseinduced enzyme in lactose fermenting bacteria (coliform group) is detected when the colorless ONPG reagent is hydrolyzed to 349-13 Version 13.1.0 App 3.4 - 14 September 10, 2013 liberate a yellow chromogenic compound, o-nitrophenol (ONP). A positive ONPG reaction (yellow) which corresponds with a negative cytochrome oxidase reaction verifies the original colony as total coliform bacteria. 9.1.7 9.1.6.2 Aseptically pour a sufficient quantity of 0.85% saline solution in a sterile plastic disposable test tube. Place tube and the bottle of ONPG reagent into an incubator and warm to approximately 37oC. Arrange 12 × 75 mm sterile plastic disposable test tubes with caps in a rack and label with numbers, sample date, set date, location and analyst initial. Remove caps and add 0.25 mL of warmed saline solution to each test tube. Using a sterile loop, remove a loopful of growth from each TSA slant and emulsify the growth into each corresponding numbered test tube with saline. Add one drop of toluene to each test tube. Cover the rack with aluminum foil and gently agitate rack. Incubate at 35 ± 0.5ºC for five minutes. Note: toluene is toxic and flammable and should be handled with care. Stock toluene is to be stored in the flammables storage cabinet. Consult the Material Safety Data Sheet (MSDS) for additional safety precautions. 9.1.6.3 After approximately 5 minutes, remove the test rack containing saline, sample and toluene from the 35oC incubator. Remove the foil covering and add 0.25 mL of warmed ONPG solution to each tube. Recap each tube, gently agitate the rack, and reincubate at 35 ± 0.5ºC for a maximum of 24 hours; a positive reaction may develop as quickly as 30 minutes after the ONPG reagent is added. 9.1.6.4 After 24-hour incubation period read each tube for the ONPG reaction. A positive reaction is indicated by a yellow color development while a negative reaction remains colorless. Escherichia coli is positive and Pseudomonas aeruginosa is negative for ONPG. Control results deviating from the expected reactions negate the verification test and an immediate review of the verification procedure should be done. Note: An extra heavy Pseudomonas inoculum may result in a positive ONPG result due to some β-galactosidase production. 9.1.6.5 Record ONPG results for each colony in the bacteriological data book. Any comments or unusual results should be noted in the comment section. Autoclave all contaminated tubes, DrySlides, loops or other contaminated devices or media prior to disposal. JWPCP Water Quality Laboratory 349-14 Version 13.1.0 App 3.4 - 15 September 10, 2013 9.1.8 A sample colony that is negative for cytochrome oxidase and positive for the ONPG test verifies that colony to be a total coliform. Calculate the % verification for each sample as follows: (No. of Colonies With “-“ CO and “+” ONPG rxn) × (100) = % verified total number of colonies tested coliform 9.1.9 Record all results in the bacteriological data book and on the Total Coliform Verification Checklist. Note: Any TSA slants which have negative growth should be reported as such and not included into the percent verification formula. 9.1.10 A pattern of low percentage verifications may indicate a problem for some agent of the membrane filtration procedure. Review initial sample data and notify the supervisor if this occurs. 9.1.11 Verifications are part of the JWPCP Microbiology Laboratory quality assurance program. Percent verified results are not used to adjust reporting results as stated in Standard Methods. 9.2 Record purchased sterile equipment, reagent and media product information in the Laboratory Supply Inventory Log. Information should include manufacturer, lot number, expiration date, quantity, date received and date in-use, and additional QA testing required or performed in-house. 9.3 When using a commercial dehydrated product for media preparation, always follow manufacturer's directions for preparation, unless otherwise directed by the SOP. No media is put into use prior to passage of all quality assurance testing. 9.4 New reagent lots recorded in the Supply Inventory notebook shall include Manufacturer, Lot Number, Manufacturer’s Expiration Date, Received Date, Opened Date and Analyst Initials. This is done primarily for Quality Assurance tracking purposes. 9.5 Review JWPCP Microbiology Quality Assurance Guidelines for Standardization of Accumet AB15 pH Meter. 9.6 Review JWPCP Microbiology Quality Assurance Guidelines for media preparation. Positive (Escherichia coli) and negative (Pseudomonas aeruginosa) control cultures are set with each batch of media prepared. . 9.7 Record reagent and batch media preparation information in the laboratory media bench book. JWPCP Water Quality Laboratory 349-15 Version 13.1.0 App 3.4 - 16 September 10, 2013 9.8 Post-filtering is a quality assurance procedure that is performed once a month to ensure that no carryover exists between subsequent filtering. An extra mEndo plate is included with the sample plates and labeled. After the last aliquot of a sample is filtered through, another membrane is placed onto the holder and the filtering unit is rinsed down with phosphate buffer. This filter is then rolled onto the pad and incubated with the other samples. Colonies present after incubation indicate that the analyst must improve the rinsing technique between aliquots. 9.9 Single and multiple analysts should count total coliform colonies from the same membrane filter plate once per month. The multiple analysts’ counts should agree within 10% and the single analyst counts should agree within 5%. Record all results in the JWPCP Bacteriological Bench Book. If the repeatability of the counts exceeds the acceptable percentage, notify the supervisor and/or the Quality Assurance Project Manager immediately. 9.10 Duplicate analyses are to be included with each batch processed. To ensure all stations are included, the routine inshore, shoreline and manifold monitoring stations are scheduled on a monthly basis at a frequency of at least 10% of sample type. 9.10.1 The filter is rolled onto to lauryl tryptose broth-saturated absorbent pads. Incubate these plates with the other samples. 9.10.3 The two results obtained (duplicate one and duplicate two) are entered into the LIMS. 9.10.4 Report unusual results or out of control response sheets, within 24 h, to the laboratory supervisor. 10. 9.11 Proper and consistent labeling of racks and tubes are essential for accurate data reporting. 9.12 Multiple analysts should count total coliform colonies on the same membrane filter once a month and each individual’s counts should agree within 10%. 9.13 Participation in the Laboratory Quality Assurance Section monthly program for total and fecal membrane filtration is required. Method Performance 10.1 The laboratory shall participate in the annual Laboratory Proficiency Testing for Total Coliform isolation by the Membrane Filtration Method. JWPCP Water Quality Laboratory 349-16 Version 13.1.0 App 3.4 - 17 September 10, 2013 11. References 11.1 Standard Methods for the Examination of Water and Wastewater. Online Edition, Methods 9222 A, 9222 B. 11.2 Microbiological Methods for Monitoring the Environment Water and Wastes, R. Bordner and J. Winters, Eds. 1978. EPA 600/8-78-017, pp. 108-113. 11.3 JWPCP Microbiology Quality Assurance Appendices, 2013. Los Angeles County Sanitation Districts-JWPCP Microbiology Laboratory. 11.4 Changes in Calculation and Reporting Procedures, Los Angeles County Sanitation Districts-JWPCP Microbiology Internal Memo, January 8, 2004. 11.5 Water Microbiology Laboratory Field Procedures, Millipore Corporation Publication, 1992. Catalog # AD323. 11.6 Difco Manual, 10th Edition, Difco Laboratories, 1984. pp. 294-296. 11.7 Biochemical Tests for Identification of Medical Bacteria, 2000 Ed. J. MacFadden, The Williams and Wilkins Company, Baltimore, Maryland, 1976. pgs. 71-78, 160-169. 11.8 BBL DrySlide Oxidase package insert. Becton Dickinson and Company, 1999. JWPCP Water Quality Laboratory 349-17 Version 13.1.0 App 3.4 - 18 September 10, 2013 Sanitation Districts of Los Angeles County Laboratories Section METHOD APPROVAL FORM Test Code 356 Method Name Fecal Coliform Enumeration by Membrane Filtration Version 13.1.0 Method Date September 10, 2013 Reasons for Method Revision Standard Annual Revisions Revised by: Tuan Lai Laboratory Technician JWPCP WQL 7/te/& Signature Date Debra Leachman Microbiologist II JWPCP WQL Ol 12* I (3 Date Approved by: Kathy Walker Supervisor I JWPCP WQL Signature Final Approval: Jean Lee Superintendent of JWPCP Laboratory \ Am ? OA)A£, U / Signature App 3.4 - 19 1 9/ao /(3 Date -eJL Date 356. FECAL COLIFORM ENUMERATION BY MEMBRANE FILTRATION INTRODUCTION Fecal coliform bacteria are a subgroup of the total coliform group. Fecal coliforms are defined as aerobic or facultative anaerobic, gram negative, lactose fermenting, non-spore-forming, rodshaped bacteria capable of growth at 44.5ºC. When grown on mFC medium, fecal coliforms ferment lactose and produce an acid (SM 9222D). This acid then reacts with the aniline dye present in the medium to produce characteristic blue colonies. Wastewater and fresh and marine receiving waters may be analyzed for fecal coliforms using the membrane filtration method. The present membrane filtration method allows for greater reproducibility than the multiple tube fermentation method, and confirmed results can be obtained in 24 hours. 1. 2. 3. Scope and Application 1.1 This procedure is applicable for use with treated wastewater, marine and fresh receiving waters. 1.2 Solids and other background interferences present in the sample must be considered when determining the applicability of the test. 1.3 Results ranging from 1 to 9 are reported to 1 significant figure, and results 10 or greater are rounded to 2 significant figures. Summary of Method 2.1 Sample aliquot is filtered through a membrane filter. 2.2 The filter is rolled directly onto the surface of an mFC agar plate. 2.3 The plate is sealed in a waterproof pouch. The pouch is then submerged in a 44.5 ± 0.2ºC water bath for 24 ± 2 h. 2.4 The filter is examined under fluorescent light and magnification. All blue-colored colonies are counted as fecal coliform. 2.5 Results are reported as fecal coliform colony forming units (cfu) per 100 mL of sample. Sample Handling and Preservation JWPCP Water Quality Laboratory 356-1 App 3.4 - 20 Version 13.1.0 September 10, 2013 4. 3.1 Sampling schedules must be planned to ensure that testing is done immediately after the samples are delivered to the lab, ideally within 2 h. Samples collected in the field that are not analyzed immediately must be iced or refrigerated at < 8°C during transit to the lab. The holding time for samples may not exceed 6 h. 3.2 After each sample is collected the analyst records various observations, including time of collection, electronically onto a PDA. When the analyst returns back to the laboratory a hotsync is performed on the PDA, and an observation sheet(s) is printed, signed and filed. The signed observation sheet is the chain of custody form for the samples. 3.3 Once the samples arrive back to the laboratory, an analyst must measure and record the temperature of a randomly selected sample, using a Raytek® laser temperature probe or other similar external device. 3.4 Samples are collected in polypropylene bottles that have been thoroughly washed and sterilized. Prior to use, sample bottles must pass a 48 h TSB sterility check. 3.5 Bottle size should allow for adequate sample volume with sufficient headspace for thorough mixing. Appropriate labeling must include sample location, date/time and sampler’s initials. 3.6 Shore samples must be held refrigerated until final results are known. 3.7 If plant effluent has been chlorinated, then the addition of sodium thiosulfate to the collection bottle is mandatory. A 0.1 mL dose of a 10% solution of sodium thiosulfate will neutralize approximately 10 ppm residual chlorine. The use of commercially prepared sterile Whirl-pak® bags containing thiosulfate pills is especially convenient. To ensure that no chlorine remains, a chlorine residual analysis should be run on the neutralized sample prior to fecal coliform analysis. If the original chlorine level exceeds the neutralizing capacity of the sodium thiosulfate, then the sample must be re-collected with enough sodium thiosulfate to completely neutralize the chlorine. If a high chlorine residual is suspected, a chlorine residual determination should be made prior to the neutralization step. Interferences 4.1 The presence of solids and turbidity may cause clogging of the membrane filter. If the solids interference cannot be diluted out because the fecal coliform density is low, then the multiple tube fermentation method must be substituted. 4.2 Samples with high background concentrations may overgrow fecal coliform organisms. Reducing sample aliquots or setting serial dilutions may reduce this interference. The addition of rosolic acid to the mFC media is used to inhibit background growth. JWPCP Water Quality Laboratory 356-2 App 3.4 - 21 Version 13.1.0 September 10, 2013 4.3 5. Bacterial clumping may result in false low fecal coliform determinations. This effect may be reduced by vigorous agitation of the sample prior to analysis. Apparatus 5.1 Circulating water bath, or other incubator capable of maintaining a constant temperature of 44.5 ± 0.2ºC 5.2 Stereoscopic dissecting microscope (10× or 15×) and daylight type fluorescent lamp 5.3 Hand tally (periodically calibrated) 5.4 Vacuum source 5.5 Vacuum filter flasks – safety coated (2 liter and 1 liter in sequence) 5.6 Sterilized filtration units - funnel and filter holder 5.7 UV sterilizer with short-wave germicidal lamp (254 nm) 5.8 Bunsen burner 5.9 Ethanol in wide mouth cup for flaming forceps 5.10 Forceps with flat ends 5.11 Sterilized graduated cylinders (50 mL) 5.12 Sterile pipets, 1 and 10 mL, cotton plugged, graduated or serological 5.13 Sterile petri dishes, loose lids, 60 × 15 mm 5.14 Manifold for multiple filtration units. 5.15 Sterile membrane filters with grid, white, 47 mm diameter, 0.45 µm pore diameter, i.e., Millipore® type HA 5.16 Sterilized Guth dispensing bottle(s). 5.17 Heat sealable pouches and sealer 5.18 Incubator capable of holding temperature of 35 ± 0.5ºC JWPCP Water Quality Laboratory 356-3 App 3.4 - 22 Version 13.1.0 September 10, 2013 6. 5.19 Platinum loop / needle or sterile, disposable, plastic loop / needle 5.20 16 × 125 mm disposable test tubes with screw caps 5.21 Test tube racks for holding 16 mm tubes Media/Reagents 6.1 Thoroughly review MSDS sheets for health and safety concerns prior to media or reagent handling. 6.2 Laboratory prepared media should be recorded in the Equipment/Media Preparation Laboratory Notebook, including all appropriate information such as manufacturer, lot, expiration date, quantity of dehydrated media used, quantity prepared, additives, pH, autoclave cycle, controls and analyst initials. 6.3 Laboratory Pure Water, Deionized Water. Water that has passed through a reverse osmosis system and deionizing resins so that it meets the Standard Methods performance specifications for medium quality reagent water (Standard Methods Online Editions,1080C, Table 1080:II). Additionally, it must pass the Standard Methods performance specifications for water used in microbiological testing (Standard Methods Online Editions, 9020B.4.d, Table 9020:II). 6.4 Phosphate Buffered Solution. Sterile buffered solution used to rinse down filtration unit between subsequent aliquots of the same sample. Phosphate buffered solution is also used for dilution blank preparation. 6.4.1 Stock Phosphate Buffer Solution. Add 34.0 g potassium dihydrogen phosphate (KH2PO4) to 500 mL laboratory pure water and mix. Adjust pH to 7.2 ± 0.5 with NaOH and bring volume to 1 L. Label the bottle with reagent name, manufacturer’s name, lot number, preparation date, expiration date and analyst initials. Autoclave at 121ºC for 15 min. After completely cooling bottle to room temperature, aseptically inoculate 20 mL of stock phosphate buffer solution into a 100 mL TSB media bottle. Incubate the TSB bottle at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. Discard solution if the TSB bottle becomes turbid. Store refrigerated and handle aseptically. Discard if turbidity is present or after 3 months of use. 6.4.2 Magnesium Chloride Solution. Add 81.1 g magnesium chloride (MgCl2·6H2O) to 1 L laboratory pure water and mix to dissolve. Label the bottle with reagent name, manufacturer’s name, lot number, preparation date, expiration date and analyst initials. Autoclave at 121ºC for 15 min. JWPCP Water Quality Laboratory 356-4 App 3.4 - 23 Version 13.1.0 September 10, 2013 6.4.2.1 After completely cooling bottle to room temperature, aseptically inoculate 20 mL of magnesium chloride solution into a 100 mL TSB media bottle. Incubate the TSB bottle at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. Discard solution if the TSB bottle becomes turbid. Store refrigerated and handle aseptically. Discard if turbidity is present or after 3 months of use. 6.4.3 Working Phosphate Buffered Solution. Add 50 mL magnesium chloride solution to 10 L of laboratory pure water in a carboy and mix thoroughly. Dispense the laboratory pure water containing magnesium chloride into 1 L or 2 L reagent bottles and cap loosely. Suspend a biological indicator in a separate 2 L bottle filled with laboratory pure water. This bottle is designated exclusively for quality control use and should be rotated to different areas in the autoclave with each batch. The label information should include the reagent name, preparation date, expiration date, analyst initials and bottle number, which identifies the bottle position in the autoclave. Cover each bottle cap with foil, label and autoclave tape. Autoclave at 121ºC for 60 min and record bottle positions in Equipment/Media Preparation Book. Cool and tighten caps. Label and incubate biological indicator at 58-62ºC for 24 and 48 h (following manufacturer’s directions). After completely cooling bottles to room temperature, aseptically add 1.25 mL stock phosphate buffer solution per 1 L sterile laboratory pure water containing magnesium chloride. Mix by inverting bottles several times. Record all preparation information in Equipment/Media Preparation Book. Final pH 7.2 ± 0.1. 6.4.4 Each batch of phosphate buffer is tested for sterility. Randomly select one bottle from the batch and aseptically inoculate 20 mL of phosphate buffered water into a 100 mL TSB media bottle. Also check the sterility of the stock phosphate solution by aseptically inoculating 10 mL of solution into a 50 mL TSB media bottle. Incubate the TSB bottles at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. If the TSB bottle becomes turbid, check biological indicator result, autoclave records and TSB batch QA. Discard the entire batch. Discard stock phosphate solution if it fails QA. Store working phosphate buffer away from direct sunlight for up to three months. Discard if turbidity develops before three months. 6.4.5 Phosphate Buffer 9.0 mL Dilution Blanks. Add 1.25 mL stock phosphate buffer solution and 5.0 mL magnesium chloride solution per 1 L laboratory pure water and mix thoroughly. Adjust pH with 0.1 N or 1.0 N NaOH to achieve a final pH of 7.2 ± 0.1. Record all preparation information in the Equipment/Media Preparation Book. Dispense into calibrated 9.0 mL test tubes and label racks with reagent name, preparation date, expiration date and analyst initials. Attach autoclave JWPCP Water Quality Laboratory 356-5 App 3.4 - 24 Version 13.1.0 September 10, 2013 tape to each rack and place a biological indicator to one of the racks, autoclave at 121ºC for 15 min. Record all autoclave information in Equipment/Media Preparation Book. Once phosphate buffered blanks have cooled to room temperature take the final pH using several phosphate buffer blanks. Visually check each tube’s calibration mark to ensure each tube has 9.0 ± 0.2 mL, and tighten caps. 6.4.6 6.5 6.6 Each batch of phosphate buffer blanks is tested for sterility. Randomly select 2 tubes from the batch and aseptically pour into a 100 mL TSB media bottle. Incubate the TSB bottle at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. If the TSB bottle becomes turbid, check autoclave records and biological indicator result. Discard the entire batch if quality assurance tests indicate problem to be autoclave related. If turbidity is not present, retest another 2 tubes from the batch in TSB. If the TSB is negative, keep the entire batch. If the TSB bottle turns positive, discard the entire batch. Store phosphate buffer blanks away from direct sunlight and discard if turbidity develops before the expiration date of 3 months for screw cap and 2 weeks for slip cap tubes. mFC Agar. Used to detect and enumerate fecal coliform from water samples using membrane filtration method. Add 52.0 g M-FC agar (Difco) to 1 L of laboratory pure water and mix to dissolve. Continue mixing and bring to a boil. Once media begins to boil, add 10 mL of a 1% solution of rosolic acid in 0.2 N NaOH. Continue heating for 1 min. Do not autoclave. If necessary, adjust to pH 7.4 with 1 N HCl. Cool to approximately 55ºC and dispense 5-mL into 60 × 15 mm sterile petri dishes with a sterile dispenser, such as a Unispense automatic dispenser. Dispensed medium should be a depth of 4 to 5 mm. Dispensed plates are covered to protect them from light and cooled until solidified. Prepared plates are repackaged and labeled with reagent name, preparation date, expiration date and analyst initials. Store in refrigerator for up to two weeks. Final pH 7.4 ± 0.2. Prepare positive and negative controls as well as a minimum of 3 sterility controls or 1% of the plates set for each batch of media and incubate for 24 h at 44.5 ± 0.2ºC. Record all preparation information in the Equipment/Media Preparation Book. Note: mFC is considered a respiratory irritant and a possible carcinogen. Consult MSDS for details. 6.5.1 Rosolic Acid, 1% Solution. Add 0.1 g rosolic acid to 10 mL of stock 0.2 N NaOH. Mix well. Prepare fresh reagent for each batch of mFC agar. 6.5.2 Stock 0.2 N NaOH. Add 1 g NaOH to 125 mL laboratory pure water. Mix to dissolve. Store in labeled reagent bottle for up to 3 months. Lauryl Tryptose Broth. Media used in initial step of fecal coliform verification. Add 35.6 g (Difco) to 1 L of laboratory pure water and mix to dissolve. Dispense 10 mL into each 16 × 125 mm screw cap tube containing an inverted fermentation JWPCP Water Quality Laboratory 356-6 App 3.4 - 25 Version 13.1.0 September 10, 2013 vial and label racks with reagent name, preparation date, expiration date and analyst initials. Autoclave at 121°C for 15 min. Cool and tighten caps. Store at room temperature away from direct sunlight for up to three months. Final pH 6.8 ± 0.2. Positive, negative and sterility controls are incubated for 24 and 48 h at 35 ± 0.5ºC. Record all preparation information in the Equipment/Media Preparation Book. 7. 6.7 EC Broth (Escherichia coli broth). Media used in final step of fecal coliform verification. Add 37.0 g (Difco) to 1 L of laboratory pure water and mix to dissolve. Dispense 10 mL into each 16 × 125 mm screw cap tube containing an inverted fermentation vial and label racks with reagent name, preparation date, expiration date and analyst’s initials. Autoclave at 121ºC for 15 min. Cool and tighten caps. Store at room temperature away from direct sunlight for up to three months. Final pH 6.9 ± 0.2. Positive, negative and sterility controls are incubated for 24 h at 44.5 ± 0.2ºC. Record all preparation information in the Equipment/Media Preparation Book. 6.8 Biological Indicator. Bacillus stearothermophilus spore suspension ampules. An unused ampule serves as a positive control, labeled and placed in the water bath on a monthly basis or sooner if a new lot is used. Store unused ampules at 2-8oC. Procedure 7.1 Sample aliquots and dilutions are predetermined and based on sample type. The optimal sample volume will yield 20-60 colonies per plate. The laboratory is currently using 0.5, 5.0, 20, and 50 mL aliquots to ensure that a range of 1-12,000 fecal coliform/100 mL may be calculated from marine receiving waters. 7.2 Label the bottom of each mFC plate with sample location and volume. Include a blank with each sample. Stack the labeled dishes starting with the largest aliquot and end with a sample blank on top. Cover plates until processing begins. 7.3 Aseptically set up to three sterile filtering apparatus into a manifold unit that is attached to a vacuum and waste collection system. 7.4 Aseptically transfer sterile phosphate buffered water to a sterile Guth bottle and label with reagent name. Record the phosphate buffer identification information in the laboratory data book. 7.5 Using flamed forceps, place a membrane filter, grid side up, on the mesh plate of the filter base (forceps tip should only touch outer rim of filter). Reseat and lock on filtering funnel. Rinse the interior of the funnel thoroughly with phosphate buffered water and draw a steady but continuous vacuum through the filter. Do not pull excess air through the filter membrane. JWPCP Water Quality Laboratory 356-7 App 3.4 - 26 Version 13.1.0 September 10, 2013 8. 7.6 Using flamed forceps, carefully remove the blank membrane filter and place it grid-side up onto the mFC agar surface. Manipulate the filter to ensure air is not trapped under the filter. This method is used for transferring blank and sample membrane filters. 7.7 Shake each sample bottle vigorously prior to processing. 7.8 Each membrane filter should be pre-wet with buffer before adding sample. This allows the analyst to examine the filter to ensure it is seated correctly and not damaged. 7.9 Sample volumes of less than 10 mL should not be dispensed directly onto a filter. Dispense sample into filter funnel containing a small amount of buffer (~10 mL) and swirl for an even distribution. 7.10 Dispense the smallest volume or highest dilution of sample into each filtering funnel, and draw a steady vacuum through the filter, ensuring that there is no excess moisture left on the filter. Thoroughly rinse down the filtering unit with at least 30 mL of phosphate buffer and draw through. Remove the filter aseptically and transfer grid side up onto the mFC agar. Continue to process sample aliquots ending with the largest or least dilute sample volume. 7.11 After each sample has been processed, rinse the filtering units thoroughly with hot water followed by deionized water, and dry with lint-free wipes. The clean filtering units are sanitized for immediate reuse only. Place them in a UV sterilizing unit for a minimum of 4 min. 7.12 After all samples are processed, separately filter positive (Escherichia coli) and negative (Pseudomonas aeruginosa) controls. Incubate these plates with the processed samples. Use the appropriate dose that will yield individual colonies with characteristic colonial morphology on mFC agar. 7.13 Place the inverted plates containing filtered samples in waterproof bags. Label the bags with date and time. Seal and submerge bags in a circulating water bath at 44.5 ± 0.2ºC for 24 ± 2 h. 7.14 The sample plates must be incubated within 30 min of processing. 7.15 Duplicate analyses are included with each batch processed, and the routine inshore, shoreline and manifold monitoring stations are scheduled on a monthly basis at a frequency of at least 10% of sample type. Counting Colonies JWPCP Water Quality Laboratory 356-8 App 3.4 - 27 Version 13.1.0 September 10, 2013 8.1 After 24 h incubation, starting with the blank plate, examine for contamination or any notable changes on the filter or media. Examine and count plates set for each sample, starting with the highest dilution or lowest volume filtered, i.e., blank, 10-1, 1 mL, etc. 8.2 Use a stereoscopic microscope (10× or 15×) with daylight fluorescent light source to yield maximum visibility for identifying and counting fecal coliform colonies. 8.3 Remove bagged plates from the water bath. Review and record positive and negative control reactions. 8.4 Fecal coliform bacteria are various shades of blue. As the fecal coliforms ferment lactose and grow, they produce an acid, which reacts with the aniline dye in the media to produce a blue color. Count colonies using magnification and a fluorescent light source, record all colonies demonstrating this morphology. Colonies exhibiting a gray coloration should not be counted as fecal coliforms. Non fecal coliforms are gray to cream-colored, and atypical colonies are gray to green-colored. 8.5 Individual colonies that have grown into each other can be discerned by a separate nuclei or a fine line of contact. Irregularly shaped colonies may result from turbidity or artifacts in the sample. 8.6 The use of a hand tally (counter) may aid in keeping track of higher counts, but it is important to calibrate the tally regularly. 8.7 Record all counts and any notable information in the laboratory bench book. Comments include unusual conditions on the filter such as the presence of solids, artifacts, or high background counts. The condition of the growth on the filter should also be noted. This may include confluent growth, confluent areas or the presence of too many colonies to obtain an accurate reading. A record of positive and negative controls must be associated with each set of samples. 8.8 All incubated media must be autoclaved prior to disposal. Liquid waste can be dumped down the drain, and disposable materials can be discarded with the laboratory trash. 8.9 Due to the possible inhibitory effect of colony crowding, and in order to maximize the confidence level of a fecal coliform concentration, statistically determined minimum and maximum ranges are used to calculate final results. Sample aliquots producing counts within the ideal countable range of 20-60 fecal coliform colonies must be used. If more than one aliquot yields a countable fecal coliform range, then these results are calculated individually but reported as an arithmetic mean. The number of fecal coliform colonies from a sample dilution or volume can be used in the following equation to determine colony forming units per 100 mL of original sample volume. JWPCP Water Quality Laboratory 356-9 App 3.4 - 28 Version 13.1.0 September 10, 2013 Fecal Coliform Colonies Counted × 100 = Fecal Coliform cfu/100 mL Volume of Sample Filtered (mL) 8.10 If a countable range of 20-60 fecal coliform colonies is not obtained from any of the sample aliquots tested, then total all fecal coliform counts on all filters and report as number CFU per 100 mL. 8.10.1 If the colony count(s) on one or more aliquots is less than 20, add all numbers and divide by total volume. Report as CFU per 100 mL. Filters with inhibitory effects are reported as an estimated count and are excluded from the calculation. 8.10.2 If no colonies are present on any plate, divide one by the sum of all representative aliquots or dilutions (mL), multiply by 100 and report result as less than that value per 100 mL. 8.10.3 If the number of colonies is greater than the countable range maximum of 60 colonies from the smallest volume filtered, calculate the result using 60 and report the result as greater than that value. If the colony count is greater than 60, and the colonies are distinct, uncrowded and of characteristic morphology, the exact count may be used to calculate the result. Such a result is noted as an estimated count. 8.10.4 Plates with a total bacteria count exceeding 200 colonies (fecal coliform and non-coliform colonies) are recorded as TNTC (too numerous to count) and not used to calculate a final concentration. 8.11 9. Concentrations of indicator organisms, such as fecal coliform, are expressed as colony forming unit (cfu) per 100 mL sample. The calculation is based on the theory that one characteristic fecal coliform colony represents one fecal coliform bacterium in the original sample. Quality Assurance 9.1 Perform biochemical verification on 5% of each type of sample set per month for typical fecal colonies. For atypical fecal coliform colonies, set verifications on at least one sample per month. In order to evaluate false positive and false negative trends adequately, atypical verifications may be substituted for typical verifications as needed. 9.1.1 For each sample to be verified select colonies from the mFC plate(s) that have been used to report the final result. Using sterilized needles or loops, pick approximately 10 isolated typical fecal coliform colonies from one quadrant of the plate(s) and inoculate into individual LTB tubes. Using the single quadrant approach when selecting typical colonies for JWPCP Water Quality Laboratory 356-10 App 3.4 - 29 Version 13.1.0 September 10, 2013 verification improves the chance for randomizing colony selection. Systematically add additional quadrants as necessary. 9.1.2 Include both positive and negative controls with each set of verifications. Inoculate Escherichia coli (positive control) and Pseudomonas aeruginosa (negative control) into LTB tubes and include along with test colonies. Label rack with I.D. numbers, sample date, set date, location, control information and analyst initials. Incubate at 35ºC for 24 h and examine for gas production (a positive reaction). Reread at 48 h if the 24 h reading is negative. 9.1.3 Record LTB results for each colony in the bacteriological data book. Any comments or unusual results should be noted in the comment section. 9.1.4 Transfer growth from each positive LTB tube and the negative control to a corresponding EC broth tube. Label rack with I.D. numbers, sample date, set date, location, control information and analyst initials. Incubate in a circulating waterbath at 44.5 ± 0.2ºC for 24 h. Gas production in EC tubes verifies the presence of fecal coliform bacteria. 9.1.5 Record EC results for each colony in the in the bacteriological data book. Any comments or unusual results should be noted in the comment section. 9.1.6 Autoclave all contaminated tubes, loops or other contaminated devices or media prior to disposal. 9.1.7 A sample colony that is positive for LTB growth and positive for gas production in EC tubes verifies that colony to be a fecal coliform. Calculate the % verification for each sample. 9.1.8 Record all results in the bacteriological data book and on the Fecal Coliform Verification Checklist. 9.1.9 A pattern of low percentage verifications may indicate a problem with the membrane filtration procedure. Review initial sample data and notify the supervisor if this occurs. Review trends or changes in verification rates. 9.1.10 Verifications are part of the JWPCP Microbiology Laboratory quality assurance program. Percent verified results are not used to adjust reporting results as stated in Standard Methods. 9.2 Duplicate analyses are included with each batch processed. To ensure all stations are included, the routine inshore, shoreline and manifold monitoring stations are scheduled on a monthly basis at a frequency of at least 10% of sample type. The two results obtained (duplicate one and duplicate two) are entered into LIMS. JWPCP Water Quality Laboratory 356-11 App 3.4 - 30 Version 13.1.0 September 10, 2013 Report unusual results or out of control response sheets within 24 h to the laboratory supervisor. 9.3 Post-filtering is a quality assurance procedure that is performed once a month to ensure that no carryover exists between subsequent filtering. An extra M-FC plate is prepared with the sample plates and labeled. After the last aliquot of a sample is filtered through, another membrane is placed on the holder and the filtering unit is rinsed down with phosphate buffer. The filter is then rolled onto the agar and incubated with the other samples. Colonies present after incubation indicate that the analyst must improve the rinsing technique between aliquots. 9.4 Single and multiple analysts should count fecal coliform colonies from the same membrane filter plate once per month. The multiple analysts’ counts should agree within 10% and the single analyst counts should agree within 5%. Record all results in the JWPCP Bacteriological Bench Book. If the repeatability of the counts exceeds the acceptable percentage, notify the supervisor and/or the Quality Assurance Project Manager immediately. 9.5 Record purchased sterile equipment, reagent and media product information in the Laboratory Supply Inventory Log. Information should include manufacturer, lot number, expiration date, quantity, date received and date in-use, and additional QA testing required or performed in-house. 9.6 When using a commercial dehydrated product for media preparation, always follow manufacturer's directions for preparation, unless otherwise directed by the SOP. No media is put into use prior to passage of all quality assurance testing. 9.7 New reagent lots recorded in the Supply Inventory notebook shall include Manufacturer, Lot Number, Manufacturer’s Expiration Date, Received Date, Opened Date and Analyst Initials. This is done primarily for Quality Assurance tracking purposes. 9.8 Review JWPCP Microbiology Quality Assurance Guidelines for Standardization of Accumet AB15 pH Meter. 9.9 Review JWPCP Microbiology Quality Assurance Guidelines for media preparation. Positive (Escherichia coli) and negative (Pseudomonas aeruginosa) control cultures are set with each batch of media prepared. 9.10 Record reagent and batch media preparation information in the laboratory media bench book. 9.11 Proper and consistent labeling of racks and tubes are essential for accurate data reporting. JWPCP Water Quality Laboratory 356-12 App 3.4 - 31 Version 13.1.0 September 10, 2013 9.12 10. Method Performance 10.1 11. Participation in the Laboratory Quality Assurance Section monthly program for quality assurance for total and fecal membrane filtration is required. The laboratory shall participate in the annual Laboratory Proficiency Testing for Fecal Coliform isolation by the Membrane Filtration Method. References 11.1. Standard Methods for the Examination of Water and Wastewater, Online Editions, 9022 A, 9222 D. 11.2. Microbiological Methods for Monitoring the Environment Water and Wastes, R. Bordner and J. Winters, Eds. 1978. EPA 600/8-78-017. 11.3. JWPCP Microbiology Quality Assurance Appendices, 2013. Los Angeles County Sanitation Districts-JWPCP Microbiology Laboratory. 11.4. Changes in Calculation and Reporting Procedures, Los Angeles County Sanitation Districts, JWPCP Microbiology Internal Memo, January 8, 2004. 11.5. Water Microbiology Laboratory Field Procedures, Millipore Corporation Publication, Catalog # AD323, 1992. JWPCP Water Quality Laboratory 356-13 App 3.4 - 32 Version 13.1.0 September 10, 2013 Sanitation Districts of Los Angeles County Laboratories Section METHOD APPROVAL FORM Test Code 357 Method Name Enterococcus Enumeration by Membrane Filtration Version 13.1.0 Method Date July 9, 2013 Reasons for Method Revision Standard Annual Revisions/Removal of the reference to the addition of indoxyl B-D glucoside to the mEI agar Revised by. Susan Mizoguchi Senior Laboratory Technician JWPCP WQL 01,/Aijti Date Debra Leachman Microbiologist II JWPCP WQL Date Approved by: Kathy Walker Supervisor I JWPCP WQL Final Approval: Jean Lee Superintendent of JWPCP Laboratory it- Signature 77 / ) A )&?_ "\ Date ^ App 3.4 - 33 0\-£x, 357. ENTEROCOCCUS ENUMERATION BY MEMBRANE FILTRATION INTRODUCTION The enterococcus indicator group is historically defined as a subgroup of the fecal streptococci (members of the genus Streptococcus), which inhabit the GI tract of warm-blooded animals. The enterococci are characterized as gram-positive ovoid bacteria that hydrolyze indoxyl ß-D glucoside and grow at an elevated temperature of 41º C. Since this SOP reference is EPA-821R-06-009, Method 1600: Membrane Filter Test Method for Enterococci in Water, members of the enterococcus group are referred to using the genus Enterococcus, i.e., Enterococcus faecalis, Enterococcus faecium, Enterococcus gallinarum, and Enterococcus avium. Bergey's Manual (1989) and ATCC have also reclassified the enterococcus group to the genus Enterococcus from Streptococcus. Enterococci presence in recreational waters, both fresh and marine, have been correlated to swimming-associated gastroenteritis and use of membrane filtration methods have been approved for their recovery. The EPA method 1600 employs the selective medium, mEI agar, for enumerating enterococci in 24 hours. Wastewater and marine and fresh receiving waters may be analyzed for the enterococcus group using this method. 1. 2. Scope and Application 1.1. This procedure is applicable for use with wastewater and fresh and marine receiving waters. 1.2. Solids and other background interference present in the sample must be considered when determining the applicability of the test. 1.3. Results ranging from 1 to 9 are reported to 1 significant figure, and results 10 or greater are rounded to 2 significant figures. Summary of Procedure 2.1. Sample aliquot is filtered through a membrane filter. 2.2. The filter is rolled onto an mEI agar plate and incubated at 41 ± 0.5ºC for 24 h. 2.3 The filter is examined under cool, white fluorescent light and magnification. All colonies exhibiting any blue halo regardless of colony color are counted as enterococci. Colonies must be greater than or equal to 0.5 mm in diameter, independent of the blue halo. 2.4 Results are recorded as Enterococcus colony forming units (CFU) per 100 mL of sample. JWPCP Water Quality Laboratory 357-1 App 3.4 - 34 Version 13.1.0 July 09, 2013 3. 4. Sample Handling and Preservation 3.1 Sampling schedules must be planned to ensure that testing is done immediately after the samples are delivered to the lab, ideally within 2 h. Samples collected in the field that are not analyzed immediately must be iced or refrigerated at temperature < 8°C during transit to the lab. The holding time for samples may not exceed 6 h. 3.2 After each sample is collected the analyst records various observations, including time of collection, electronically onto a PDA. When the analyst returns back to the laboratory a hotsync is performed on the PDA, and an observation sheet(s) is printed, signed and filed. The signed observation sheet is the chain of custody form for the samples. 3.3 Once the samples arrive back at the laboratory, an analyst must measure and record the temperature of a randomly selected sample, using a Raytek® laser temperature probe or other similar external device. 3.4 Samples are collected in polypropylene bottles that have been thoroughly washed and sterilized. Prior to use, sample bottles must pass a 48 h TSB sterility check. 3.5 Bottle size should allow for adequate sample volume with sufficient headspace for thorough mixing. Appropriate labeling must include sample location, date/time, and sampler’s initials. 3.6 Shore samples must be refrigerated and held until the final results are known. 3.7 If plant effluent has been chlorinated, then the addition of sodium thiosulfate to the collection bottle is mandatory. A 0.1 mL dose of a 10% solution of sodium thiosulfate will neutralize approximately 10-ppm residual chlorine. The use of commercially prepared sterile Whirl-pak© bags with thiosulfate pills is especially convenient. To ensure that no chlorine remains, a chlorine residual analysis should be run on the neutralized sample prior to coliform analysis. If the original chlorine level exceeds the neutralizing capacity of the sodium thiosulfate, then the sample must be re-collected with enough sodium thiosulfate to completely neutralize the chlorine. If high chlorine residual is suspected, a chlorine residual determination should be made prior to the neutralization step. Interferences 4.1 The presence of solids and turbidity may cause clogging of the membrane filter. Reducing aliquot volumes or setting serial dilutions may reduce this interference. JWPCP Water Quality Laboratory 357-1 App 3.4 - 35 Version 13.1.0 July 09, 2013 5. 6. 4.2 Samples with high background concentrations may overgrow enterococcus organisms. Reducing aliquot volumes or setting serial dilutions may reduce this interference. 4.3 Bacterial clumping may result in false low Enterococcus determinations. This effect may be reduced by vigorous agitation of the sample prior to analysis. Apparatus 5.1 Incubators capable of holding temperatures of 41 ± 0.5ºC, 35 ± 0.5ºC, and 45 ± 0.5ºC 5.2 Stereoscopic dissecting microscope (10× or 15×) and cool, white fluorescent lamp 5.3 Hand tally 5.4 Vacuum source 5.5 Vacuum filter flasks - safety coated (2 liter and 1 liter in sequence) 5.6 Sterilized filtration units - funnel and filter holder 5.7 UV sterilizer with short-wave (254 nm) germicidal lamp 5.8 Bunsen burner 5.9 Ethanol in wide mouth cup used for flaming forceps 5.10 Forceps with flat ends 5.11 Sterilized graduated cylinders (50 mL) 5.12 Sterile pipets, 1 and 10 mL, cotton plugged, graduated or serological 5.13 Sterile disposable petri dishes, loose lids, 60 × 15 mm 5.14 Manifold used for multiple filtering units 5.15 Sterile membrane filters with grid, white, 47 mm diameter, 0.45 µm pore diameter e.g., Millipore® type HA 5.16 Sterilized Guth dispensing bottle Media/Reagents JWPCP Water Quality Laboratory 357-1 App 3.4 - 36 Version 13.1.0 July 09, 2013 6.1 Laboratory Pure Water, Deionized Water. Water that has passed through a reverse osmosis system and deionizing resins so that it meets the Standard Methods performance specifications for “medium-quality” reagent water (Standard Methods Online Editions 1080C, Table 1080:II). Additionally, it must pass the Standard Methods performance specifications for water used in microbiological testing (Standard Methods Online Editions 9020B.4.d, Table 9020:II). 6.2 Phosphate Buffered Solution. Sterile buffered water used to rinse down filtration unit between subsequent aliquots of the same sample. Phosphate buffered solution is also used for dilution blank preparation. 6.2.1 Stock Phosphate Buffer Solution. Add 34.0 g potassium dihydrogen phosphate (KH2PO4) to 500 mL laboratory pure water and mix. Adjust pH to 7.2 with 1 N NaOH and bring volume to 1 L. Label bottle with reagent name, manufacturer’s name, lot number, preparation date, expiration date and analyst initials. Autoclave at 121ºC for 15 min. After completely cooling bottle to room temperature, aseptically inoculate 20 mL of stock phosphate buffer solution into a 100 mL TSB media bottle. Incubate the TSB bottle at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. Store refrigerated and handle aseptically. Discard if turbidity is present or after 3 months of use. 6.2.2 Magnesium Chloride Solution. Add 81.1 g magnesium chloride (MgCl2·6H20) to 1 L laboratory pure water and mix to dissolve. Label bottle with reagent name, manufacturer’s name, lot number, preparation date, expiration date and analyst initials. Autoclave at 121ºC for 15 min. After completely cooling bottle to room temperature, aseptically inoculate 20 mL of magnesium chloride solution into a 100 mL TSB media bottle. Incubate the TSB bottle at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. Store refrigerated and handle aseptically. Discard if turbidity is present or after 3 months of use. 6.2.3 Working Phosphate Buffered Solution. Add 50 mL magnesium chloride solution to 10 L of laboratory pure water in a carboy and mix thoroughly. Dispense the laboratory pure water containing magnesium chloride into 1 L or 2 L reagent bottles and cap loosely. Suspend a biological indicator in a separate 2 L bottle filled with laboratory pure water. This bottle is designated exclusively for quality control use and should be rotated to different areas in the autoclave with each batch. The label information should include the reagent name, preparation date, expiration date, analyst initials and bottle number, which identifies the bottle position in the autoclave. Cover each bottle cap with foil, label and autoclave tape. JWPCP Water Quality Laboratory 357-1 App 3.4 - 37 Version 13.1.0 July 09, 2013 Autoclave at 121ºC for 60 min and record bottle positions in equipment/media preparation book. Cool and tighten caps. Label and incubate biological indicator at 58-62ºC for 24 and 48 h (following manufacturer’s directions). After completely cooling bottles to room temperature, aseptically add 1.25 mL stock phosphate buffer solution per 1 L sterile laboratory pure water containing magnesium chloride. Mix by inverting bottles several times. Record all preparation information in Equipment/Media Preparation Book. Final pH 7.2 ± 0.1. 6.2.4 Each batch of phosphate buffer is tested for sterility. Randomly select one bottle from the batch and aseptically inoculate 20 mL of phosphate buffered water into a 100 mL TSB media bottle. Also, check the sterility of the stock phosphate solution by aseptically inoculating 10 mL of solution into a 50 mL TSB media bottle. Incubate the TSB bottles at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. If the TSB bottles become turbid, check biological indicator result, autoclave records and TSB batch QA. Discard the entire batch. Discard stock phosphate solution if it fails QA. Store working phosphate buffer away from direct sunlight for up to three months. Discard if turbidity develops before three months. 6.2.5 Phosphate Buffered 9.0 mL Dilution Blanks. Add 1.25 mL stock phosphate buffer solution and 5.0 mL magnesium chloride solution per 1 L laboratory pure water and mix thoroughly. Adjust pH with 0.1 N or 1.0 N NaOH to achieve a final pH of 7.2 ± 0.1. Record all preparation information in Equipment/Media Preparation Book. Dispense into calibrated 9.0 mL test tubes and label racks with reagent name, preparation date, expiration date and analyst initials. Attach autoclave tape to each rack and place a biological indicator to one of the racks, autoclave at 121ºC for 15 min. Record all autoclave information in equipment/media preparation book. Once phosphate buffered blanks have cooled to room temperature take the final pH using several phosphate buffer blanks. Check the tubes to ensure each tube is 9.0 ± 0.2 mL. 6.2.6 Each batch of phosphate buffer blanks is tested for sterility. Randomly select 2 tubes from the batch and aseptically pour into a 50 mL TSB media bottle. Incubate the TSB bottle at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. If the TSB bottle becomes turbid, check autoclave records and biological indicator result. Discard the entire batch if quality assurance tests indicate problem to be autoclave related. If everything is normal, retest another 2 tubes from the batch in TSB. If the TSB is negative, keep the entire batch. If the TSB bottle turns positive, discard the entire batch. Store phosphate buffer blanks away from direct sunlight and discard if turbidity develops before the expiration date of 3 months for screw cap and 2 weeks for slip cap tubes. JWPCP Water Quality Laboratory 357-1 App 3.4 - 38 Version 13.1.0 July 09, 2013 6.3 mEI Agar: Plate media used to isolate and differentiate enterococci from water by membrane filtration. Add 72 g of dehydrated mEI agar (Difco) to 1 L of laboratory pure water and mix to dissolve. Continue mixing and bring to a boil. Autoclave at 121ºC for 15 min. Remove and cool to 55ºC. Add 0.24 g of nalidixic acid sodium salt (C12H11N2NaO3) and 0.02 g dehydrated 2,3,5-triphenyltetrazolium chloride (Sigma) to the mEI medium and mix to dissolve completely (consult the MSDS for the proper handling of nalidixic acid). Dispense 4-5 mL into 60 × 15 mm sterile petri dishes and cool. Final pH 7.1 ± 0.2. Set positive and negative controls and a minimum of 3 sterility plates for each batch of media prepared and incubate at 41ºC ± 0.5ºC for 24 h. Re-bag prepared plates, label and store refrigerated for up to 2 weeks. NOTE: Effective August 1, 2013, the addition of indoxyl ß-D glucoside to the mEI agar will no longer be required. Refer to the “Media Comparison for Enterococcus Analysis by EPA Method 1600” (DM # 2712601) for a detailed explanation. 6.4 Brain Heart Infusion Agar. A complete medium for cultivating a variety of fastidious microorganisms and used in the verification procedure for enterococci. Add 52 g of dehydrated BHI agar (Difco) to 1 L laboratory pure water and mix to dissolve. Continue mixing and bring to a boil. Autoclave at 121ºC for 15 min. Remove and cool to 50ºC. Dispense 15 mL into 100 × 15 mm sterile petri dishes and cool. Final pH 7.4 ± 0.2. Set positive and negative controls and a sterility plate for each batch of media prepared and incubate at 35ºC ± 0.5ºC for 48 h. Rebag prepared plates, label and store refrigerated for up to 2 weeks. 6.5 Brain Heart Infusion Broth. A highly nutritive broth medium used for cultivating a variety of fastidious microorganisms including Streptococcus and used in the verification procedure for enterococci. Add 37 g of dehydrated BHI (Difco) to 1 L laboratory pure water and mix to dissolve. Dispense 3 mL into 13 × 100 mm screw cap tubes and cap loosely. Autoclave at 121ºC for 15 min. Remove, cool and tighten caps. Final pH 7.4 ± 0.2. Set positive and negative controls and a sterility check for each batch prepared and incubate at 35ºC ± 0.5ºC for 24 h and 45ºC ± 0.5ºC for 48 h. Store away from sunlight at 25ºC for up to 3 months. 6.6 Brain Heart Infusion Broth with 6.5 % NaCl. A highly selective broth medium used in the verification procedure for enterococci. Add 37 g of dehydrated BHI (Difco) and 60 g of sodium chloride (NaCl) to 1 L of laboratory pure water to achieve a final concentration of 6.5% NaCl. In this example, Difco BHI is preformulated with 5 g NaCl per Liter. Mix to dissolve. Dispense 3 mL into 16 × 100 mm screw cap tubes and cap loosely. Autoclave at 121ºC for 15 min. Remove, cool and tighten caps. Final pH 7.4 ± 0.2. Set positive and negative controls and a sterility check for each batch prepared and incubate at 35º C ± 0.5ºC for 48 h. Store away from sunlight at 25ºC for up to 3 months. 6.7 Bile Esculin Agar. A differential medium used in the verification procedure for enterococci for the isolation and presumptive identification of Group D JWPCP Water Quality Laboratory 357-1 App 3.4 - 39 Version 13.1.0 July 09, 2013 streptococci. Add 43.5 g of dehydrated BEA (Difco) to 1 L laboratory pure water and mix to dissolve. Continue mixing and bring to a boil. Cool to 50ºC and dispense 5 mL into 16 × 125 mm screw cap tubes. Autoclave at 121ºC for 15 min. After autoclaving, tilt racks so that the agar forms a slant length of approximately 6.3 cm., cool to solidify and tighten caps. Final pH 6.8 ± 0.2. Set positive and negative controls and a sterility check for each batch prepared and incubate at 35ºC ± 0.5ºC for 48 h. Store refrigerated for up to 3 months. 7. Procedure 7.1 Sample aliquots and dilutions are predetermined and based on sample type. The optimal sample volume will yield 20-60 colonies per plate. The laboratory is currently using 0.5, 5.0, 20, and 50 mL aliquots to insure that a range of 1-12,000 Enterococcus/100 mL may be calculated. 7.2 Label the bottom of each mEI plate with the sample location and volume. Stack the labeled dishes starting with the largest aliquot and end with a sample blank on top. 7.3 Aseptically set up to three sterile filtering apparatus into a manifold unit that is attached to a vacuum and waste collection system. 7.4 Aseptically transfer the sterile buffered water to a sterile Guth bottle. Record the phosphate buffer identification information in the laboratory bench book. 7.5 Using flamed forceps, place a membrane filter, grid side up, on the mesh plate of the filter base (forceps tip should only touch outer rim of filter). Reseat and lockon filtering funnel. Rinse the interior of the funnel thoroughly with phosphate buffered water, and draw a steady but continuous vacuum through the filter. Do not pull excess air through the filter membrane. 7.6 Using flamed forceps, carefully remove the blank membrane filter and place it grid-side up onto the mEI agar surface. Manipulate the filter to ensure air is not trapped under the filter. This method is used for transferring blank and sample membrane filters. 7.7 Shake each sample bottle vigorously prior to processing. 7.8 Each membrane filter should be pre-wet with buffer before adding sample. This allows the analyst to examine the filter to insure it is seated correctly and not damaged. 7.9 Sample volumes of less than 10 mL are not dispensed directly onto a filter. Dispense sample into filter funnel, containing a small amount of buffer (~10 mL) and swirl for an even distribution. JWPCP Water Quality Laboratory 357-1 App 3.4 - 40 Version 13.1.0 July 09, 2013 7.10 Dispense the smallest volume or highest dilution of sample into each filtering funnel, and draw a steady vacuum through the filter, ensuring that there is no excess moisture left on the filter. Thoroughly rinse down the filtering funnels with at least 30 mL of phosphate buffer and draw through. Remove the filter aseptically and transfer grid side up onto the mEI agar surface. Continue to process sample aliquots ending with the largest or least dilute sample volume. 7.11 After each sample has been processed, rinse the filtering units thoroughly with hot water followed by deionized water, and dry with lint-free wipes. The clean filtering units are sterilized for immediate reuse only. Place them in a UV sterilizing unit for a minimum of 4 min. 7.12 After all the samples are processed separately filter positive (Enterococcus faecalis) and negative (Pseudomonas aeruginosa) controls. Incubate these controls with the processed samples. Use the appropriate dose that will yield individual colonies with characteristic colonial morphology on mEI agar. 7.13 Place the inverted plates containing filtered samples in a covered tray containing a wet sponge or paper towel to maintain a humid environment. Label the container with test name, date and time. Incubate at 41 ± 0.5ºC for 24 ± 2h. 8. Calculations 8.1 Counting Colonies 8.1.1 After 24 h incubation, starting with the blank plate, examine for contamination or any notable changes on the filter or media. Examine and count plates set for each sample, starting with the highest dilution or lowest volume filtered, i.e., blank, 10-1, 1 mL, etc. 8.1.2 Use of a stereoscopic microscope (10×-15×) with a cool, white fluorescent light source will yield maximum visibility in identifying and counting enterococci colonies. 8.1.3 An Enterococcus colony is characterized as any colony surrounded by a blue halo, regardless of colony color. The blue halo around the colony is due to the ability of Enterococcus to cleat the chromogenic substrate indoxyl ß-D glucoside present in the mEI medium. Colonies must be greater than or equal to 0.5 mm in diameter, independent of the blue halo. Count colonies using magnification and a fluorescent light source, record all colonies demonstrating this morphology. JWPCP Water Quality Laboratory 357-1 App 3.4 - 41 Version 13.1.0 July 09, 2013 8.2 8.1.4 A separate nuclei or a fine line of contact can discern individual colonies that have grown into each other. Irregularly shaped colonies may result from turbidity or artifacts in the sample. 8.1.5 The use of a hand tally (counter) may aid in keeping track of higher counts; however, the tally must be calibrated regularly. 8.1.6 Record all counts and any notable information in the laboratory bench book. Comments should include unusual conditions on the filter such as the presence of solids, artifacts, or high background counts. The condition of the growth on the filter should also be noted. This may include confluent growth, confluent areas, or the presence of too many colonies to obtain an accurate reading (> 60 colony forming units). A record of positive and negative controls must be associated with each set of samples. Calculations 8.2.1 Due to the possible inhibitory effect of colony crowding (and in order to maximize the confidence level of an enterococcus concentrations), statistically determined minimum and maximum ranges are used to calculate the final results. Sample aliquots producing counts within the ideal countable range of 20-60 enterococci colonies must be used. The number of enterococci colonies from a sample dilution or volume can be used in the following equation to determine colony-forming units (CFU) per 100 mL of original sample volume. Enterococci Colonies Counted × 100 = Enterococcus cfu/100 mL Volume of Sample Filtered (mL) 8.2.2 If the colony count(s) on one or more aliquots is less than 20, add all numbers and divide by total volume, excluding plates with possible inhibitory effects. Such a result is noted as an estimated count. 8.2.3 If no colonies are present on any plate, divide one by the sum of all representative aliquots or dilutions (mL); multiply by 100 and report result as less than that value. 8.2.4 If the number of colonies is greater than the countable range maximum of 60 colonies from the smallest volume filtered, calculate the result using 60 and report the result as greater than that value. If the colony count is greater than 60, and the colonies are distinct, uncrowded and of characteristic morphology, the exact count may be used to calculate the result. Such a result is noted as an estimated count. JWPCP Water Quality Laboratory 357-1 App 3.4 - 42 Version 13.1.0 July 09, 2013 8.3 9 8.2.5 Plates with a total bacteria count exceeding 200 colonies (enterococci and non enterococci colonies) are recorded as TNTC (too numerous to count) and not used to calculate a final concentration. 8.2.6 Concentrations of indicator organisms, such as enterococci, are expressed as colony-forming unit (CFU) per 100 mL of sample. The calculation is based on the theory that one characteristic enterococcus colony represents one enterococcus bacterium in the original sample. Refer to EPA Method 1600 (EPA-821-R-06-009), Appendix B on General Operations, Counting Colonies and Calculation of Results. For QA purposes, a sampling location may require duplicate sampling and analysis. This requires a split analysis of a single sample. A separate result is calculated from each split analysis and the geometric mean is calculated. The single geometric mean result is used for reporting. Quality Assurance 9.1 Verifications 9.1.1 Perform biochemical verifications on 5% of each type of sample set per month. 9.1.2 Select well-isolated “typical” colonies (preferably 10 colonies) from the membrane filter on the mEI agar. The inclusion of colonies possessing marginally typical traits in the routine verification process will improve analyst confidence and ability. 9.1.3 Using a sterile inoculating loop, transfer cells that represent a well-isolated colony to a BHI agar plate. Incubate the plate for 24 ± 2 and 48 ± 3 h at 35 ± 0.5ºC. 9.1.4 Prepare a Gram stain using growth from the BHI agar plate and read under 1000× magnification with immersion oil. Fecal streptococci (enterococci) are Gram-positive, ovoid cocci (0.5 to 1.0 µm) occurring in pairs and short chains. 9.1.5 Select a well-isolated colony from the agar plate and transfer to a glass slide. Aseptically place a drop of hydrogen peroxide on the colony and look for oxidation (“bubbling”). Fecal streptococci (enterococci) are negative for the catalase reaction. 9.1.6 Transfer growth from plates exhibiting fecal streptococci (enterococci) characteristics (catalase negative, Gram-positive, ovoid cocci) into a BHI broth tube. Incubate the tube for 24 ± 2 h at 35 ± 0.5ºC. JWPCP Water Quality Laboratory 357-1 App 3.4 - 43 Version 13.1.0 July 09, 2013 9.1.7 Transfer a loopful of growth from the BHI broth to each of the following media: bile esculin agar (incubate at 35 ± 0.5ºC for 48 ± 3 h); brain-heart infusion broth (incubate at 45 ± 0.5ºC for 48 ± 3 h); and brain-heart infusion broth with 6.5% NaCl (incubate at 35 ± 0.5ºC for 48 ± 3 h). 9.1.8 Gram-positive cocci that grow in BHI broth at 45ºC with a positive result on BEA at 35ºC verifies that the colony is a fecal streptococci. A positive result for a culture grown on BEA is evidenced by the production of a black-brown precipitate. Growth in BHI broth at 45ºC and in BHI broth with 6.5% NaCl at 35ºC confirms that the colony belongs to the enterococcus group. 9.1.9 A positive (Enterococcus faecalis) and negative (Psuedomonas aeruginosa) control culture is set with each sample verification. 9.1.10 Results and the percent verification rate are recorded in the bacteriological laboratory data notebook. 9.1.11 Review trends or changes in verification rates. 9.1.12 Because verifications are part of the JWPCP Microbiology Laboratory quality assurance program and not applied to an entire sample count, percent verified results are not used to adjust reported results. 9.2 9.3 Media preparation 9.2.1 Review JWPCP Microbiology Quality Assurance Guidelines for media preparation. Positive (Enterococcus faecalis) and negative (Pseudomonas aeruginosa or Escherichia coli) control cultures are set with each batch of media prepared. 9.2.2 When using a commercial dehydrated product for media preparation, follow manufacturer’s directions for preparation, unless directed by the SOP. No media is put into use prior to the passage of all quality assurance testing. 9.2.3 Review JWPCP Microbiology Quality Assurance Guidelines for Standardization of Accumet AB15 pH Meter. 9.2.4 Record reagent and batch media preparation information in the laboratory media bench book. Post-filtering is a quality assurance procedure that is performed once a month to insure that no carryover of bacteria exists between individual sample analyses. An extra mEI plate is included with the sample plates and labeled. After the last JWPCP Water Quality Laboratory 357-1 App 3.4 - 44 Version 13.1.0 July 09, 2013 aliquot of a sample is filtered through, another membrane filter is place onto the holder and the filtering unit is rinsed down with phosphate buffer. This filter is then rolled onto the extra mEI agar plate and incubated with the other sample plates. Colonies present after incubation indicate that the analyst must improve the rinsing technique between aliquots. Record the results in the JWPCP Bacteriological Bench Book. 10. 9.4 Single and multiple analysts should count enterococcus colonies from the same membrane filter plate once per month. The multiple analysts’ counts should agree within 10% and the single analyst counts should agree within 5%. Record all results in the JWPCP Bacteriological Bench Book. If the repeatability of the counts exceeds the acceptable percentage, notify the supervisor and/or the Quality Assurance Project Manager immediately. 9.5 Duplicate analyses are to be included with each batch processed. To ensure all stations are included, the routine inshore, shoreline and manifold monitoring stations are scheduled on a monthly basis at a frequency of at least 10% of sample type. Refer to QA Appendices for Duplicate sample analyses. The two results obtained (duplicate one and duplicate two) are entered into the LIMS. 9.6 Report unusual results, or out-of-control response sheets, within 24 h, to the laboratory supervisor. Method Performance 10.1 11. The laboratory shall participate in the annual Laboratory Proficiency Testing for the isolation of Enterococcus by the Membrane Filtration Method. References 11.1 Method 1600: Enterococci inWater by Membrane Filtration Using membrane Enterococus Indoxyl-B-D-Glucoside Agar (mEI) Membrane Filter Test Method for Enterococci in Water, A. Dufour and W. Messer, Eds. July 2006. EPA-821R-06-009. 11.2 Microbiological Methods for Monitoring the Environment - Water and Wastes, R. Bordner and J. Winters, Eds. 1978. EPA 600/8-78-017. 11.3 Standard Methods for the Examination of Water and Wastewater, Online Edition, Methods 1000, 9000. 11.4 Comparison of Current Enterococcus 48h Method 9230C with 24h Method 1600. Internal Report, JWPCP Microbiology Laboratory, 2002. Los Angeles County Sanitation Districts. JWPCP Water Quality Laboratory 357-1 App 3.4 - 45 Version 13.1.0 July 09, 2013 11.5 JWPCP Microbiology Quality Assurance Appendices. JWPCP Microbiology Laboratory, 2013. Los Angeles County Sanitation Districts 11.6 Changes in Calculation and Reporting Procedures. JWPCP Microbiology Internal Memo, 2004. Los Angeles County Sanitation Districts. JWPCP Water Quality Laboratory 357-1 App 3.4 - 46 Version 13.1.0 July 09, 2013 Sanitation Districts of Los Angeles County Laboratories Section METHOD APPROVAL FORM Test Code 351 Method Name Fecal Coliform Enumeration by Multiple Tube Fermentation Version 13.1.0 Method Date September 10, 2013 Reasons for Method Revision Standard Annual Revisions Revised by. Mark Patterson Laboratory Technician JWPCP WQL Signature Debra Leachman Microbiologist II JWPCP WQL O ? CriJ/ / Date/ CA /W 3> IV2o ( <£> Date Approved by: Kathy Walker Supervisor I JWPCP WQL Signature Date Signature Date Final Approval: Jean Lee Superintendent of JWPCP Laboratory App 3.4 - 47 351. FECAL COLIFORM ENUMERATION BY MULTIPLE TUBE FERMENTATION INTRODUCTION The fecal coliform is a subgroup of the total coliform indicator group of bacteria. Separation into this subgroup is based upon the fecal coliform’s ability to ferment lactose at an elevated temperature of 44.5ºC, as well as at 35ºC, the optimum growth temperature for total coliform. Members of the fecal coliform are found in the feces of various warm-blooded animals, and have been used as a more definitive indicator for recent fecal pollution. The fecal coliform subgroup defines primarily Escherichia coli, and occasionally thermotolerant Klebsiella sp. Receiving waters and wastewaters may be monitored using the multiple tube fermentation method. This method employs the 5-tube fermentation setup. A mathematically derived index based on the number and combination of positive and negative tubes per dilution is reported as the Most Probable Number (MPN)/100 mL or MPN/g dry wt. 1. 2. 3. Scope and Application 1.1. This procedure is applicable for use with wastewater, seawater, and receiving waters. 1.2. Results ranging from 1 to 9 are reported with 1 significant figure and results 10 or greater are reported to 2 significant figures. 1.3 A fecal coliform presumptive, confirmed, or completed Most Probable Number index may be calculated from a 5-tube MPN table (Standard Methods Online). This MPN table is used to determine, within 95% confidence limits, an MPN index for a combination of positive results from 5 plants of a 3 decimal dilution series. Summary of Procedure 2.1. A preliminary 5-tube MPN setup of Lauryl Tryptose Broth (LTB) is inoculated and incubated at 35ºC for 24 and 48 h to determine total coliform density. 2.2. The result of each LTB tube is recorded. Each positive LTB is transferred to E. coli (EC) broth for incubation at 44.5ºC for 24 h. 2.3. Results are recorded. Fecal coliform densities are determined from the MPN tables provided by Standard Methods Online on the basis of positive EC tubes. Sample Handling and Preservation App 3.4 - 48 4. 3.1. Start bacteriological examination of water samples promptly after collection. Collected samples that are not analyzed immediately must be iced or refrigerated at < 8 ºC. The holding time for samples may not exceed 6 h. 3.2. Collect samples for bacteriological examination in polypropylene bottles that have been thoroughly cleaned, rinsed and sterilized. Prior to use, sample bottles must pass a 48 h tryptic soy broth sterility check. Allow bottle size for an adequate sample with sufficient headspace for thorough mixing. Label with sample description, date, time, and sampler’s initials. 3.3 If there is a possibility that the sample has residual chlorine, the sample container must already contain a reducing agent. A 0.1 mL aliquot of a 10% solution of sodium thiosulfate, Na2S2O3, will neutralize approximately 10 ppm of residual chlorine in the sample. The use of commercially pre-sterilized thiosulfate sample bags is especially convenient (i.e., Nasco Whirl-pak®). To ensure that chlorine neutralization is achieved, a chlorine residual analysis should be performed on the sample prior to continuing total coliform procedure. Interferences 4.1 5. Background organisms or toxic constituents in 10 mL volumes of sample may inhibit fecal coliform growth. Smaller aliquots or serial dilutions may reduce the toxicity to the point of no effect. Apparatus 5.1. Culture tubes, 16 × 150 mm and 18 × 150 mm, (Kimble® or Pyrex®) or similar disposable borosilicate tubes and slip caps 5.2. Disposable culture tubes, 16 × 125 mm, and screw caps 5.3. Test tube racks to hold 16 mm and 18 mm OD tubes 5.4. Shell vials, ¼" diameter, or Durham tubes 5.5. Sterile disposable cotton plugged serological pipettes, 10 mL, wide tip 5.6. Pipette bulb or pipette dispenser 5.7. Sterile plastic disposable loop or nichrome wire loop 5.8. Sterile cotton tip applicators 5.9. Bunsen burner App 3.4 - 49 6. 5.10. Incubator, capable of holding temperature of 35 ± 0.5ºC 5.11. Circulating water bath capable of maintaining 44.5 ± 0.2ºC Media/Reagents 6.1 Thoroughly review MSDS sheets for health and safety concerns prior to media or reagent handling. 6.2 Laboratory prepared media should be recorded in the Equipment/Media Preparation Laboratory Notebook, including all appropriate information such as manufacturer, lot, expiration date, quantity of dehydrated media used, quantity prepared, additives, pH, autoclave cycle, controls and analyst initials. 6.3 Laboratory Pure Water, Deionized Water. Water that has passed through a reverse osmosis system and deionizing resins so that it meets the Standard Methods performance specifications for “medium-quality” reagent water (SM 21st Edition Online 1080C, Table 1080:II). Additionally, it must pass the Standard Methods performance specifications for water used in microbiological testing (SM 21st Edition Online (2006) 9020B.4.d, Table 9020:II). 6.4 Phosphate Buffered Solution. Sterile buffered solution used for dilution blank preparation. 6.4.1 Stock Phosphate Buffer Solution. Add 34.0 g potassium dihydrogen phosphate (KH2PO4) to 500 mL laboratory pure water and mix. Adjust pH to 7.2 ± 0.5 with NaOH and bring volume to 1 L. Label the bottle with reagent name, manufacturer’s name, lot number, preparation date, and expiration date and analyst initials. Autoclave at 121ºC for 15 min. After completely cooling bottle to room temperature, aseptically inoculate 20 mL of stock phosphate buffer solution into a 100 mL TSB media bottle. Incubate the TSB bottle at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. Discard solution if the TSB bottle becomes turbid. Store refrigerated and handle aseptically. Discard if turbidity is present or after 3 months of use. 6.4.1.1 Magnesium Chloride Solution. Add 81.1 g magnesium chloride MgCl2·6H2O to 1 L laboratory pure water and mix to dissolve. Label the bottle with reagent name, manufacturer’s name, lot number, preparation date, expiration date and analyst initials. Autoclave at 121ºC for 15 min. After completely cooling bottle to room temperature, aseptically inoculate 20 mL of magnesium chloride solution into a 100 mL TSB media bottle. Incubate the TSB bottle at 35 ± 0.5ºC for 24 and 48 h. App 3.4 - 50 Record sterility information in the Equipment/Media Preparation Book. Discard solution if the TSB bottle becomes turbid. Store refrigerated and handle aseptically. Discard if turbidity is present or after 3 months of use. 6.4.1.2 Working Phosphate Buffered Solution. Add 50 mL magnesium chloride solution to 10 L of laboratory pure water in a carboy and mix thoroughly. Dispense the laboratory pure water containing magnesium chloride into 1 L or 2 L reagent bottles and cap loosely. Suspend a biological indicator in a separate 2 L bottle filled with laboratory pure water. This bottle is designated exclusively for quality control use and should be rotated to different areas in the autoclave with each batch. The label information should include the reagent name, preparation date, expiration date, analyst initials and bottle number, which identify the bottle position in the autoclave. Cover each bottle cap with foil, label and autoclave tape. Autoclave at 121ºC for 60 min and record bottle positions in the Equipment/Media Preparation Book. Cool and tighten caps. Label and incubate biological indicator at 58-62ºC for 24 and 48 h (follow manufacturer’s directions). After completely cooling bottles to room temperature, aseptically add 1.25 mL stock phosphate buffer solution per 1 L sterile laboratory pure water containing magnesium chloride. Mix by inverting bottles several times. Record all preparation information in Equipment/Media Preparation Book. Final pH 7.2 ± 0.1. 6.4.1.3 Each batch of phosphate buffer is tested for sterility. Randomly select one bottle from the batch and aseptically inoculate 20 mL of phosphate buffered water into a 100 mL TSB media bottle. Also check the sterility of the stock phosphate solution by aseptically inoculating 10 mL of solution into a 50 mL TSB media bottle. Incubate the inoculated TSB bottles at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. If the TSB bottle becomes turbid, check biological indicator result, autoclave records and TSB batch QA. Discard the entire batch. Discard stock phosphate solution if it fails QA. Store working phosphate buffer away from direct sunlight for up to three months. Discard if turbidity develops before three months. 6.4.1.4 Phosphate Buffer 9.0 mL Dilution Blanks: Add 1.25 mL stock phosphate buffer solution and 5.0 mL magnesium chloride solution per 1 L laboratory pure water and mix thoroughly. Adjust pH with 0.1N or 1.0N NaOH to achieve a final pH of 7.2 ± 0.1. Record all preparation information in the App 3.4 - 51 Equipment/Media Preparation Book. Dispense into calibrated 9.0 mL test tubes and label racks with reagent name, preparation date, expiration date and analyst initials. Attach autoclave tape to each rack and place a biological indicator to one of the racks, autoclave at 121ºC for 15 min. Record all autoclave information in Equipment/Media Preparation Book. Once phosphate buffered blanks have cooled to room temperature take the final pH using several phosphate buffer blanks. Visually check each tube’s calibration mark to ensure each tube has 9.0 ± 0.2 mL, and tighten caps. 6.4.1.5 Each batch of phosphate buffer blanks is tested for sterility. Randomly select 2 tubes from the batch and aseptically pour into a 100 mL TSB media bottle. Incubate the TSB bottle at 35 ± 0.5ºC for 24 and 48 h. Record sterility information in the Equipment/Media Preparation Book. If the TSB bottle becomes turbid, check autoclave records and biological indicator result. Discard the entire batch if quality assurance tests indicate problem to be autoclave related. If everything is normal, retest another 2 tubes from the batch in TSB. If the TSB is negative, keep the entire batch. If the TSB bottle turns positive, discard the entire batch. Store phosphate buffer blanks away from direct sunlight and discard if turbidity develops before the expiration date of 3 months for screw cap and 2 weeks for slip cap tubes. 6.5 Lauryl Tryptose Broth. Presumptive test media for the total coliform group. Add 35.6 g Lauryl Tryptose (Difco) to 1 L laboratory pure water and mix to dissolve. Dispense 10 mL volumes into 16 x 150 culture tubes containing an inverted gas collection vial; cap tubes. Autoclave at 121ºC for 15 min. Final pH is 6.8 ± 0.2. Prepare positive and negative controls as well as a minimum of 3 sterility controls or 1% of the tubes set for each batch of media and incubate for 24 h at 35 ± 0.5ºC. Record all preparation information in the Equipment/Media Preparation Book. The holding time is 2 weeks for slip cap tubes and 3 months for screw cap tubes at room temperature. 6.6 Double Strength Lauryl Tryptose Broth. Double strength presumptive test media used for the 10 mL sample inoculum. Add 71.2 g of Lauryl Tryptose (Difco) to 1 L laboratory pure water and mix to dissolve. Dispense 10 mL volumes into 18 x 150 culture tubes containing an inverted gas collection vial; cap tubes. Autoclave at 121ºC for 15 min. Final pH is 6.8 ± 0.2. Prepare positive and negative controls as well as a minimum of 3 sterility controls or 1% of the tubes set for each batch of media and incubate for 24 h at 35 ± 0.5ºC. Record all preparation information in the Equipment/Media Preparation Book. The holding time is 2 weeks for slip cap tubes and 3 months for screw cap tubes at room temperature. App 3.4 - 52 6.7 7. EC Broth, confirmatory test transfer medium for fecal coliforms. Add 37.0 g of EC media (Difco) to 1 L laboratory pure water and mix to dissolve. Dispense 10 mL volumes into 16 x 150 culture tubes containing an inverted gas collection vial; cap tubes. Autoclave at 121ºC for 15 min. Final pH is 6.9 ± 0.2. Prepare positive and negative controls, as well as a minimum of 3 sterility controls (or 1% ) for each batch of media and incubate for 24 h at 35 ± 0.5ºC. Record all preparation information in the Equipment/Media Preparation Book. The holding time is 2 weeks for slip cap tubes and 3 months for screw cap tubes at room temperature. Procedure 7.1 Homogenation of receiving and wastewater samples: Collect sample in a sterile container, leaving enough headspace for adequate mixing. Shake sample vigorously (at least 25 times). Proceed to section 7.3 for inoculation of sample dilutions. 7.2 Homogenation of biosolids, sludge, sediment, and slurry samples: Collect sample in a sterile container. Homogenization procedures are based on whether the sample is a liquid or a solid (liquid samples are generally defined as samples containing 7% or less total solids/dry weight): 7.2.1 Liquid sample. Using a sterile graduated cylinder, measure 300 mL of sample. Transfer to a sterile blender and blend on high speed (approximately 50 to 60 volts) for one to two minutes. Measure the pH of the homogenized sample using a pH indicator strip (pH range 5-10). If necessary, adjust the pH to 7.0-7.5 by adding 1.0 N hydrochloric acid (HCl) or 1.0 N sodium hydroxide (NaOH). Record any adjustments in the biosolids bench book. NOTE: When adjusting the pH, do not exceed the homogenized sample volume by greater than 5% (15 mL). 7.2.2 Solid sample. Weigh 30.0 ± 0.1 g of well-mixed sample in a sterile dish. Whenever possible, the sample tested should contain all the material that will be included in the biosolids. For example, if wood chips are part of the biosolids compost, some mixing or grinding may be needed to achieve homogeneity before testing. Large pieces of wood that are not easily ground may be discarded prior to homogenizing. Transfer the sample to a sterile blender. Make a 1:10 dilution by adding 270 ml sterile phosphate buffer to the blender. Cover and blend on high speed (approximately 50 to 60 volts) for one to two minutes. This is considered the homogenized sample. If necessary, adjust the pH to 7.0-7.5 by adding 1.0 N hydrochloric acid (HCl) or 1.0 N sodium hydroxide (NaOH). Record any adjustments made in the biosolids bench book. NOTE: When adjusting the pH, do not exceed the homogenized sample volume by greater than 5% (15 mL). App 3.4 - 53 8 7.3 Set up a 5-tube MPN rack (NOTE: For samples containing greater than 7 % total solids, please refer to EPA Method 1680: Fecal Coliforms in Biosolids by Multiple Tube Fermentation Procedure for dilution information). This is achieved by placing 5 LTB tubes per dilution row in a rack that is labeled with the appropriate sample identification and date. Using a sterile wide mouth pipette, dispense 10 mL volumes into the first row of concentrated (2X) LTB. Dispense 1 mL volumes of the sample and 1 mL of a 1:10, 1:100, and 1:1000 sample dilutions into single strength LTB. The series of dilutions may be carried out further if necessary. Incubate inoculated tubes at 35 ± 5ºC for 24 ± 2h. 7.4 After the initial 24 ± 2 h incubation, shake the rack and examine each tube for gas production. Any gas bubble with turbidity present is considered positive evidence for the presence of coliform. Record presumptive results. Place EC medium tubes into a plastic rack that is labeled with appropriate sample information. Transfer an inoculum from the positive LTB tubes to EC medium by using a sterile loop or cotton swab. Reincubate all negative LTB tubes for an additional 24 h at 35 ± 5ºC for 24 ± 2h and incubate the inoculated EC tubes at 44.5 ± 0.2ºC for 24 ± 2 h. 7.5 After 24 h incubation, gently shake the racks of LTB and EC tubes. Examine both sets of tubes for the presence of growth and gas. Record the results. Gas formation in the EC tubes constitutes a positive confirmatory test for the presence of fecal coliform. Transfer positive 48 h LTB tubes to a properly labeled rack of EC tubes and incubate for 24 h. LTB tubes that are negative after 48 ± 3h are discarded. 7.6 Record results and obtain an MPN value based on the confirmatory EC results. Calculations 8.1 Record fecal coliform concentration as MPN/100 mL for liquid samples or MPN/g dry wt. for sample with > 7% solids (NOTE: Please refer to Standard Method 2540 G for determining percent total solids. The percent total solids will be used to determine MPN/g dry wt.). MPN values for a variety of positive and negative tube combinations are given in Standard Methods Online 9221.C., table 9221: IV. When more than three dilutions are used, select the highest dilution that gives positive results in all five tubes tested and the two next succeeding dilutions. 8.2 For combinations not appearing in the MPN index, use the MPN calculator developed by Albert Klee. 8.3 The distribution of positive and negative culture tubes should follow a logical pattern. Repeated occurrence of illogical patterns should be reviewed and reported immediately. App 3.4 - 54 8.4 9 All samples and results from the analyses should be entered into the LIMS. Quality Assurance 9.1 Test one pure culture of known positive reaction with each sample set. 9.2 Duplicate analyses should be performed on 10% of all samples, or at least once for every batch of samples, whichever is more frequent. Calculate the logarithmic average of both samples and report the average in the LIMS. 9.3 Review JWPCP Microbiology Quality Assurance Guidelines for media preparation. 9.4 Follow aseptic procedures for sample collection. Refer to a standard reference such as Standard Methods or the EPA manual, Microbiological Methods for Water and Wastewater for detailed sampling instructions. If fermentation media are stored in a refrigerator, bring the media to room temperature before use. Media with gas collected in the fermentation vials must be discarded to eliminate false positive results. 9.5 9.6 All data results and quality assurance information must be recorded in a bound bench book. 10 Method Performance 10.1 The laboratory shall participate in the annual Laboratory Proficiency Testing for Fecal Coliform isolation by the Multiple Tube Fermentation method. 11 References 11.1 Standard Methods for the Examination of Water and Wastewater, Online Edition, Methods 9221 A, 9221 C, 9221 E. 11.2 Microbiological Methods for Monitoring the Environment, Water and Wastes, R. Bordner and J. Winters, Eds. 1978. EPA-600/8-78-017 11.3 Difco Manual, Difco Laboratories, 1984. . 11.4 JWPCP Microbiology Quality Assurance Guidelines, 2013. Los Angeles County Sanitation Districts-JWPCP Microbiology Laboratory. 11.5 Method 1680: Fecal Coliforms in Sewage Sludge (Biosolids) by Multiple-Tube Fermentation using Lauryl Tryptose Broth (LTB) and EC Medium. U.S. Environmental Protection Agency, July 2006. App 3.4 - 55 11.6 A computer program for the determination of the most probable number and its confidence limits. A. J. Klee 1993. Journal of Microbiological Methods. 18:91-98. App 3.4 - 56 Appendix 3.5 Rain Effects on Fecal Indicator Bacteria Concentrations in Nearshore Water Samples Appendix 3.5 Rain Effects on Fecal Indicator Bacteria Concentrations in Nearshore Water Samples Figure 3.5.1 shows the effects of rainfall on the average levels of fecal indicator bacteria (FIB) at shoreline and inshore sites, respectively. All 1972-2015 FIB data were used in preparation of this figure. Figure 3.5.1 Shoreline and Inshore FIB Response to Rain Average concentrations of total coliform, fecal coliform and enterococcus FIB at shoreline and inshore. Prepared using all 1972-2015 data separated into periods of rain (defined as days with >0.1 inch of rain), 1-day post-rain, 2day post-rain, 3-day post-rain, trace rain, no rain, and all days. App 3.5 - 1 The “rain day” average levels were calculated using FIB sampling results from all shoreline sites on days when there was 0.1 inch or more of rain recorded at either the Sanitation Districts’ rain gauge at White Point, or, prior to 1991, from the L.A. Civic Center rain gauge. The long time frame provides a large sample size (shoreline rain day sample size for total coliform (TC) = 4,821, fecal coliform (FC) = 701, and enterococcus (ENT) = 1,167, nearshore rain day sample size TC = 1,923, FC = 432, and ENT = 841). Similarly, all FIB sampling results for all days 1, 2 or 3 days following these rain day events were used to calculate the 1-day, 2-day and 3-day post rain, respectively, average levels. The “trace rain” average levels used all FIB sampling results for all days with any amount of measured rainfall below 0.1 inches, as long as these days did not fall in the 3-day period following a rain event as defined above (shoreline trace rain sample size for TC = 1,588, FC = 322, and ENT = 369, nearshore trace rain sample size TC = 704, FC = 210, and ENT = 276). The “no rain” average levels excluded days with any amount or rain, as well as three days following any day with 0.1 inches or more of rain. The “all days” average levels were calculated using every FIB sample result (shoreline sample size for TC = 78,894, FC = 9,996, and ENT = 16,526, nearshore sample size TC = 42,607, FC = 7,960, and ENT = 16,170). The 0.1 inches rainfall amount was selected because the County Health Department advises avoiding water contact for 72-hours (3-days) following a rain event of 0.1 inches or more. Figure 3.5.1 shows that at shoreline and inshore sites total coliform and enterococcus average levels are about an order of magnitude higher on rain days than on ‘no rain’ days. At the shoreline total coliform averaged 700 CFU/100 ml on rain days and 84 CFU/100 ml on “no rain” days, and enterococcus averaged 191 CFU/100 ml on rain days and 13 CFU/100 ml on “no rain” days. At the inshore total coliform averaged 281 CFU/100 ml on rain days and 45 CFU/100 ml on “no rain” days, and enterococcus averaged 24 CFU/100 ml on rain days and 2 CFU/100 ml on “no rain” days. Both figures show the recovery that occurs as FIB levels return to ‘no rain’ levels, usually within three days following rain events. An assessment of the 1972-2015 FIB sample results with AB411 water contact standards determined that 62% (501 of 811 occurrences) of single sample maximum (SSM) exceedances at shore sites are associated with rain, and 65% (59 of 91 occurrences) of SSM exceedances at inshore sites are associated with rain. In both cases most of the exceedances occur on the actual rain day. These percentages are even more notable because 82% of all FIB sampling is done during dry weather. During dry weather the chances of SSM exceedances of total coliform, fecal coliform, and enterococcus SSM standards are 0.12%, 0.44%, and 1.6%, respectively at shore stations, and 0.08%, 0.001%, and 0.004%, respectively at inshore stations. By comparison, on days with more than 0.1 inch of rain, chances of SSM exceedances increased to 1.4%, 2.5%, and 25%, respectively at shore stations, and to 0.73%, 0%, and 3.0%, respectively at inshore stations (only a very limited amount of fecal coliform sampling was done at inshore sites, explaining why this value is zero). The JWPCP began continuous year-round disinfection of effluent in the 1980s. Once disinfection was continuous, FIB levels at the inshore sites dropped further, and subsequently, rain explains nearly all observations of elevated FIB at inshore sites. The incidence of SSM exceedances at shoreline sites did not change significantly in response to continuous disinfection, suggesting that dry weather runoff, birds, marine mammals, and other animals observed at the shoreline, as well as trash, bathers, decaying material from multiple sources, etc., continued to be the predominant sources of FIB detected at the shoreline. Figure 3.5.2 compares the average level of each FIB between rain days (days with >0.1 inch of rain), and dry weather (days with <0.1 inches of rain in the previous 3 days). A Baseline period (B; 1972) is compared with subsequent periods of primary (P; 1973-1983), partial secondary (PS; 1984-2002), full secondary (FS; 2003-2013) treatment, and the current (Current; 20142015) period. There was no routine sampling for fecal coliform or enterococcus prior to 1984. Overall, levels of total coliform, fecal coliform and enterococcus were 8.3, 4.9, and 14.6 times higher, respectively, on rain days (days when rainfall was > 0.1 inches) than in dry weather. App 3.5 - 2 Figure 3.5.2 Temporal Trends in Rain Effects Average concentrations of shoreline total coliform measured on rain days (>0.1 inch) and in dry weather. Data are presented for a Baseline period of primary treatment (B, 1972), and for periods of increasing treatment; Advanced Primary (AP, 1973-1983), Partial Secondary (PS, 1984-2002), and Full Secondary (FS, 2003-2013), and for the current reporting period (Current, 2014-2015). App 3.5 - 3 Appendix 3.6 Total Coliform, Fecal Coliform, Enterococcus and Shellfish Harvesting Receiving water Microbiological Results Appendix 3.6 Total Coliform Receiving Water Microbiological Results All 2014 and 2015 shoreline and inshore results for Total Coliform were used to determine monthly maximum single sample and 30-day geometric mean maximum values [Rain data included] Single Sample Monthly Maximum Values S1 S2 S3 Month 62 12 18 2014 JAN 11 7 200 FEB 12 31 200 MAR 13 4 200 APR 11 8 18 MAY 280 4 18 JUN 130 18 18 JUL 130 12 24 AUG 420 110 200 SEP 560 18 200 OCT 110 24 97 NOV 100 330 200 DEC 2015 JAN 60 < 7 < 15 25 < 6 < 60 FEB 5 < 7 < 60 MAR 6 < 7 < 60 APR MAY < 6 < 3 < 15 JUN < 41 < 3 < 8 50 < 6 < 16 JUL 41 < 5 < 16 AUG 84 < 13 < 62 SEP 63 < 12 < 130 OCT 54 < 12 < 61 NOV 31 < 52 < 71 DEC Shore Stations S5 S6 110 180 140 110 110 400 55 36 32 98 100 8 700 110 120 1000 3200 27 2800 150 230 71 120 2000 66 < 116 62 < 66 62 86 < 25 32 < 13 43 < 19 < 43 78 < 25 88 < 68 80 < 44 114 < 26 94 < 36 44 99 < < < < < < < S7 33 42 310 180 27 150 150 36 200 73 73 270 23 15 61 32 23 20 39 22 33 19 25 65 < < < < < < < < < < < SB 16 1 12 400 44 120 44 200 27 2800 17 91 4 3 3 11 7 32 18 40 25 50 21 20 < < < < < < < SM 250 75 160 270 47 55 91 110 110 200 270 540 147 100 52 59 35 28 58 75 76 52 111 100 IL2 < 1 5 11 3 2 3 3 11 8 3 2 Inshore Stations (Surface) IL3 IL4 IL5 IL6 IL7 7 1 1 1 1 5 1 3 1 3 4 11 1 7 20 3 < 1 3 < 1 8 4 1 7 1 1 9 4 2 4 3 8 4 4 1 1 7 3 3 3 3 12 1 < 1 < 1 < 18 5 7 1 1 8 5 1 < 1 < 1 3 2400 < < < < < < < < < < < < 2.2 1.8 2.1 2 1.2 1.2 2.3 3 3.3 2.4 2.3 14 3400 < < < < < < < < < < < < 3.2 2.5 2.2 2 1.7 1.8 2.9 3.4 3.4 2 2 20 3600 < < < < < < < < < < < < 1 1 2 1.8 1 1.3 2 1.3 1.3 2 2.4 7.7 6600 < < < < < < < < < < < < 1.2 1.2 1.3 1.3 1.8 1.6 1.3 1.6 1.3 1 1 15 6200 12000 < < < < < < < < < < < < 1.3 1 1.9 1.7 1 1.6 1.6 1.6 1.3 1 1 26 IL2 3 1 7 8 12 1 7 4 9 5 25 < < < < < < < < < < < < 1 1.2 2.8 2.2 1.5 1.2 1.3 2.1 3.6 1.8 2 23 Inshore Stations (Bottom) IL3 IL4 IL5 IL6 IL7 8 5 3 1 4 12 1 1 2 3 5 18 8 8 27 3 20 1 1 7 8 3 1 3 20 1 4 8 3 3 3 4 3 1 3 10 4 24 18 5 9 3 9 4 8 7 8 5 3 12 8 3 5 1 4 700 < < < < < < < < < < < < 1.8 1.3 2.3 3.5 1.9 1.9 2.3 1.8 2.9 3.3 2.6 15 3000 < < < < < < < < < < < < 2.7 5.4 4.6 2.3 2 1.7 1.6 1.8 3.6 3.5 4.9 51 2000 < < < < < < < < < < < < 2 2 2.6 4.8 1.6 1.9 1.4 1.4 1.9 1.7 1.7 17 1800 < < < < < < < < < < < < 1.6 1.6 2.8 2.3 1 1.7 1.7 3.1 3.8 1.9 2.2 19 2800 < < < < < < < < < < < < 1.9 1.1 2.6 2 1.3 1.6 1.2 3.6 3.8 1.6 1.3 28 30-day Geometric Mean Monthly Maximum Values 2014 JAN < 19 < 3 < 6 12 < 4 9 < 1 < 4 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 11 < 10 10 < 1 5 < 1 < 2 < 1 < 1 < 1 < 1 < 1 < 2 < 1 < 1 < 1 FEB < 8 < 2 < 8 4 < 1 < 2 < 1 < 1 < 1 < 1 < 1 < 2 < 1 < 1 < 1 MAR < 1 < 1 < 7 < 10 < 14 < 10 < 1 APR < 1 < 1 < 8 < 3 < 3 < 6 < 1 < 6 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 MAY < 1 < 1 < 3 < 2 < 2 < 4 < 2 < 7 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 JUN < 4 < 1 < 3 < 4 < 2 < 6 < 4 < 4 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 10 < 3 < 20 < 2 < 4 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 JUL < 14 < 2 < 3 7 < 9 < 4 < 9 < 2 < 2 < 1 < 2 < 1 < 1 < 1 < 1 < 1 < 1 < 2 < 2 < 1 AUG < 20 < 2 17 < 12 < 2 < 15 < 2 < 7 < 1 < 2 < 1 < 1 < 1 < 1 < 2 < 1 < 1 < 2 < 1 SEP < 32 < 3 20 < 3 < 6 < 1 < 5 < 1 < 1 < 1 < 1 < 1 < 1 < 2 < 1 < 1 < 1 < 1 OCT < 25 < 2 < 20 9 < 1 < 1 < 1 < 1 < 1 < 1 < 2 < 1 < 1 < 1 < 1 NOV < 4 < 2 < 10 < 15 < 4 < 8 < 1 25 < 5 < 11 < 7 < 2 14 < 2 < 2 < 2 < 3 < 4 < 3 < 3 < 4 < 3 < 2 < 3 DEC < 9 < 3 2015 JAN 21 54 < 71 45 72 < 53 22 107 < 8 < 11 < 5 < 12 < 15 < 15 < 11 < 23 < 10 < 10 < 14 21 31 < 25 < 34 36 < 63 < 21 76 < 1 < 2 < 1 < 1 < 1 < 1 < 2 < 3 < 2 < 3 < 6 FEB 98 < 20 < 15 < 64 67 12 < 3 112 < 1 < 2 < 1 < 1 < 1 < 2 < 2 < 3 < 1 < 3 < 6 MAR 15 < 4 < 8 23 27 16 < 11 69 < 1 < 3 < 1 < 1 < 1 < 2 < 1 < 3 < 3 < 2 < 2 APR 24 < 5 < 8 13 37 15 < 7 50 < 1 < 2 < 2 < 1 < 2 < 2 < 2 < 3 < 4 < 3 < 3 MAY 36 < 6 < 7 46 32 8 < 5 59 < 1 < 2 < 1 < 1 < 2 < 2 < 2 < 3 < 2 < 3 < 3 JUN 16 < 8 < 8 42 9 18 < 7 65 < 2 < 2 < 3 < 2 < 1 < 2 < 1 < 3 < 3 < 3 < 4 JUL 13 < 7 23 63 55 47 < 30 70 < 2 < 2 < 3 < 2 < 1 < 2 < 2 < 6 < 3 < 3 < 3 AUG 18 < 68 28 62 < 63 47 < 9 52 < 4 < 7 < 2 < 1 < 1 < 2 < 2 < 6 < 1 < 1 < 2 SEP 24 59 45 118 < 34 27 < 15 93 < 7 < 17 < 4 < 4 < 6 < 7 < 5 < 5 < 4 < 4 < 4 OCT 22 < 54 265 62 < 37 < 20 93 < 3 < 9 < 4 < 3 < 3 < 3 < 3 < 7 < 3 < 5 < 3 NOV < 29 9 < 41 188 < 35 < 17 < 23 54 < 2 < 2 < 1 < 1 < 1 < 1 < 4 < 6 < 2 < 3 < 4 DEC < 2 TOTAL COLIFORM BATHING WATER LIMITS (Only in effect at Inshore Stations) A) Single sample shall not exceed 10,000/100 mL as a result of wastes discharged. B) 30-day Geometric Mean shall not exceed 1,000/100 mL as a result of wastes discharged. C) No single sample greater than 1000/100 mL when fecal coliform/total coliform ratio exceeds 0.1 as a result of wastes discharged. Shore station sampling is conducted for monitoring purposes only, not compliance determination. App 3.6 - 1 6400 < < < < < < < < < < < < 1.6 1.5 4.3 3.1 3.9 3.9 1.6 2.6 4.9 2.3 2.3 24 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 1 2 1 1 3 16 2 2 3 2 2 6 4 2 4 2 4 Appendix 3.6 (Continued) Fecal Coliform Receiving Water Microbiological Results All 2014 and 2015 shoreline and inshore results for Fecal Coliform were used to determine monthly maximum single sample and 30-day geometric mean maximum values [Rain data included] Single Sample Monthly Maximum Values S1 S2 Month 29 8 2014 JAN 1 1 FEB 1 5 MAR 3 1 APR MAY < 1 < 1 100 1 JUN 130 9 JUL 50 3 AUG 120 4 SEP 220 4 OCT 62 4 NOV 11 7 DEC 2015 JAN 24 56 30 6 FEB 900 18 MAR 4 2 APR 30 < 2 MAY 13 13 JUN 22 50 JUL 27 2 AUG 4 50 SEP 220 4 OCT 1 11 NOV 1 4 DEC S3 15 19 16 20 1 13 7 16 52 12 16 94 9 17 4 8 4 2 70 30 50 58 64 20 Shore Stations S5 S6 40 74 16 20 11 17 9 3 17 12 13 1 110 46 17 5 220 8 330 7 19 15 24 75 64 40 6 8 300 62 11 2 13 9 80 17 140 4 50 300 11 4 360 26 86 15 15 5 S7 SB 17 1 9 1 25 < 1 98 3 7 11 26 17 95 4 16 5 21 4 28 3 19 < 1 24 8 110 67 17 4 30 13 50 < 2 4 2 23 2 70 4 240 4 8 4 44 2 9 20 4 20 SM 11 8 7 26 8 9 4 5 24 15 25 25 12 8 240 8 11 8 30 80 22 15 21 11 IL2 < 1 1 1 3 < 1 1 2 1 3 < 1 < 1 25 < 1 < 2 2 2 2 4 4 < 2 2 1 < 1 < 1 Inshore Stations (Surface) IL3 IL4 IL5 IL6 IL7 3 < 1 1 < 1 < 1 4 1 3 < 1 < 1 1 1 < 1 < 1 4 < 1 < 1 < 1 1 < 1 4 < 1 < 1 < 1 < 1 < 1 1 < 1 1 < 1 < 1 1 < 1 < 1 < 1 4 < 1 < 1 < 1 1 1 < 1 1 < 1 < 1 4 3 1 < 1 1 2 1 < 1 < 1 < 1 17 29 64 150 82 2 1 1 < 1 < 1 < 2 2 < 2 < 2 < 2 9 < 2 < 2 < 2 < 2 2 2 < 2 < 2 < 2 < 2 < 2 < 2 < 2 7 < 2 < 2 < 2 < 2 < 2 2 2 8 7 8 4 2 < 2 2 < 2 2 2 < 2 < 2 2 1 1 < 1 1 1 3 < 1 < 1 < 1 1 3 1 < 1 < 1 < 1 30-day Geometric Mean Monthly Maximum Values 2014 JAN < 19 < 3 < 6 12 < 4 9 < 1 < 4 < 1 < 1 < 1 < 1 < 1 11 < 10 10 < 1 5 < 1 < 2 < 1 < 1 < 1 FEB < 8 < 2 < 8 4 < 1 < 2 < 1 < 1 < 1 MAR < 1 < 1 < 7 < 10 < 14 < 10 < 1 APR < 1 < 1 < 8 < 3 < 3 < 6 < 1 < 6 < 1 < 1 < 1 < 1 < 1 MAY < 1 < 1 < 3 < 2 < 2 < 4 < 2 < 7 < 1 < 1 < 1 < 1 < 1 JUN < 4 < 1 < 3 < 4 < 2 < 6 < 4 < 4 < 1 < 1 < 1 < 1 < 1 10 < 3 < 20 < 2 < 4 < 1 < 1 < 1 < 1 < 1 JUL < 14 < 2 < 3 7 < 9 < 4 < 9 < 2 < 2 < 1 < 2 < 1 < 1 < 1 AUG < 20 < 2 17 < 12 < 2 < 15 < 2 < 7 < 1 < 2 < 1 < 1 < 1 SEP < 32 < 3 20 < 3 < 6 < 1 < 5 < 1 < 1 < 1 < 1 < 1 OCT < 25 < 2 < 20 9 < 1 < 1 < 1 < 1 < 1 NOV < 4 < 2 < 10 < 15 < 4 < 8 < 1 25 < 5 < 11 < 7 < 2 14 < 2 < 2 < 2 < 3 < 4 DEC < 9 < 3 2015 JAN < 7 < 6 25 < 7 < 6 < 8 < 10 < 8 < 2 < 2 < 2 < 3 < 3 9 < 4 < 4 < 6 < 10 < 2 < 2 < 2 < 2 < 2 < 2 FEB < 10 < 9 MAR < 43 < 3 < 9 < 17 < 7 < 7 < 4 < 15 < 2 < 3 < 2 < 2 < 2 APR < 8 < 2 < 5 < 24 < 5 < 10 < 4 < 4 < 2 < 3 < 2 < 2 < 2 6 < 3 < 8 < 2 < 4 < 2 < 2 < 2 < 2 < 2 MAY < 8 < 2 < 5 13 < 4 < 5 < 2 < 5 < 2 < 2 < 2 < 2 < 2 JUN < 14 < 3 < 2 36 < 3 < 14 < 2 < 9 < 2 < 2 < 2 < 3 < 3 JUL < 9 < 11 < 7 12 44 < 7 < 42 < 3 34 < 2 < 2 < 2 < 3 < 3 AUG < 7 < 7 35 < 2 < 3 < 2 < 2 < 2 SEP < 7 < 5 < 12 < 13 < 9 < 10 < 3 9 < 1 < 1 < 1 < 1 < 1 OCT < 8 < 4 < 7 < 22 < 4 < 8 < 2 NOV < 8 < 3 < 23 < 45 < 7 < 11 < 2 < 10 < 1 < 1 < 1 < 1 < 1 DEC < 1 < 2 < 15 < 19 < 4 < 4 < 4 < 6 < 1 < 1 < 1 < 1 < 1 FECAL COLIFORM BATHING WATER LIMITS (Only in effect at Inshore Stations) A) Single sample shall not exceed 400/100 mL as a result of wastes discharged. B) 30-day Geometric Mean shall not exceed 200/100 mL as a result of wastes discharged. Shore station sampling is conducted for monitoring purposes only, not compliance determination. App 3.6 - 2 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 1 1 1 1 3 2 2 2 2 3 3 3 3 2 1 1 1 Inshore Stations (Bottom) IL2 IL3 IL4 IL5 IL6 IL7 < 1 4 2 1 1 < 1 1 5 1 < 1 1 1 < 1 1 1 1 3 1 < 1 1 3 1 1 1 1 < 1 < 1 < 1 1 1 < 1 < 1 < 1 1 1 < 1 1 1 2 1 1 < 1 1 3 4 13 3 3 3 1 < 1 < 1 < 1 4 3 1 < 1 < 1 1 3 17 1 2 < 1 1 2 8 16 24 23 42 58 1 1 < 1 < 1 1 < 1 4 < 2 2 < 2 < 2 2 < 2 23 3 < 2 < 2 < 2 < 2 2 4 2 < 2 4 2 2 2 14 2 3 2 2 < 2 < 2 < 2 2 4 4 2 4 2 8 3 4 4 2 2 2 < 2 8 4 2 2 < 2 1 9 1 4 1 < 1 1 3 3 1 3 4 1 5 1 < 1 1 1 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 1 2 2 2 3 2 2 2 2 2 2 2 3 2 1 1 1 < < < < < < < < < < < < < < < < < < < < < < < < 1 2 2 1 1 1 1 1 1 1 1 4 3 2 4 4 2 2 2 2 4 2 2 2 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 2 1 1 1 3 2 2 2 2 2 2 2 2 3 2 1 1 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 2 2 1 1 2 2 2 2 2 3 3 2 2 2 1 1 1 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 1 1 1 1 3 2 2 2 2 2 2 2 2 2 1 1 1 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 1 2 1 1 3 2 2 2 3 2 2 3 3 2 1 1 1 Appendix 3.6 (Continued) Enterococcus Receiving Water Microbiological Results All 2014 and 2015 shoreline and inshore results for Enterococcus were used to determine monthly maximum single sample and 30-day geometric mean maximum values [Rain data included] Single Sample Monthly Maximum Values S1 S2 Month 2014 JAN 4 4 3 < 1 FEB 1 11 MAR 1 < 1 APR 1 1 MAY 16 2 JUN 17 < 1 JUL 9 3 AUG 19 4 SEP 18 1 OCT NOV < 1 < 1 3 15 DEC 2015 JAN 11 40 4 2 FEB 640 35 MAR 9 < 1 APR 40 4 MAY 14 < 1 JUN 2 < 2 JUL 3 1 AUG 1 11 SEP 16 7 OCT 4 NOV < 1 1 < 1 DEC S3 2 4 18 18 4 4 4 5 12 18 4 18 18 9 3 1 3 4 3 9 12 38 18 5 Shore Stations S5 S6 40 64 32 64 5 27 1 7 5 7 21 < 1 10 1 15 4 120 3 440 3 3 1 29 120 440 110 9 17 57 60 1 13 3 4 5 13 25 4 10 110 4 5 280 56 34 30 7 5 Inshore Stations (Surface) S7 SB SM IL2 IL3 IL4 IL5 IL6 IL7 IL2 3 < 1 19 < 1 < 1 < 1 1 1 1 < 1 12 < 1 23 < 1 < 1 < 1 1 < 1 1 < 1 16 1 8 1 < 1 1 < 1 < 1 1 < 1 96 46 20 < 1 < 1 < 1 < 1 < 1 < 1 < 1 3 4 7 < 1 < 1 < 1 < 1 1 < 1 < 1 9 3 4 < 1 < 1 < 1 < 1 1 < 1 < 1 33 1 < 1 < 1 < 1 < 1 1 < 1 < 1 < 1 7 15 3 < 1 1 < 1 < 1 < 1 < 1 < 1 11 1 15 8 < 1 < 1 < 1 < 1 < 1 < 1 37 1 8 < 1 < 1 < 1 < 1 < 1 < 1 < 1 4 < 1 20 < 1 < 1 < 1 < 1 < 1 < 1 < 1 33 10 8 84 11 < 1 4 12 52 5 40 12 26 < 1 < 1 < 1 1 1 1 < 1 6 1 12 1 < 1 1 < 1 < 1 < 1 < 1 23 9 60 < 1 1 < 1 < 1 < 1 < 1 < 1 5 1 7 < 1 1 < 1 < 1 < 1 < 1 < 1 5 1 8 < 1 1 < 1 < 1 < 1 < 1 < 1 5 1 4 < 1 < 1 < 1 1 < 1 < 1 < 1 7 1 13 < 1 < 1 3 < 1 < 1 1 < 1 8 4 18 < 1 < 1 < 1 1 < 1 < 1 < 1 3 1 3 < 1 < 1 < 1 < 1 < 1 < 1 < 1 110 12 24 < 1 1 < 1 < 1 < 1 < 1 1 4 96 87 < 1 1 < 1 < 1 < 1 1 < 1 7 8 11 < 1 < 1 < 1 < 1 < 1 < 1 < 1 Monthly Maximum 30-day Geometric Mean 2014 JAN < 6 < 1 < 1 < 19 < 5 < 3 < 1 < 4 < 1 < 1 < 1 < 1 < 1 FEB < 2 < 1 < 2 < 13 < 7 < 2 < 1 < 10 < 1 < 1 < 1 < 1 < 1 MAR < 1 < 2 < 4 < 10 < 11 < 7 < 1 < 4 < 1 < 1 < 1 < 1 < 1 APR < 1 < 2 < 4 < 1 < 3 < 4 < 3 < 5 < 1 < 1 < 1 < 1 < 1 MAY < 1 < 1 < 4 < 1 < 3 < 3 < 2 < 4 < 1 < 1 < 1 < 1 < 1 JUN < 2 < 1 < 3 < 5 < 2 < 2 < 2 < 3 < 1 < 1 < 1 < 1 < 1 JUL < 2 < 1 < 3 < 4 < 1 < 6 < 1 < 1 < 1 < 1 < 1 < 1 < 1 AUG < 3 < 1 < 2 < 4 < 1 < 4 < 2 < 2 < 1 < 1 < 1 < 1 < 1 SEP < 6 < 2 < 4 < 11 < 2 < 3 < 2 < 4 < 2 < 1 < 1 < 1 < 1 OCT < 6 < 1 < 6 < 11 < 2 < 4 < 1 < 3 < 2 < 1 < 1 < 1 < 1 5 < 1 < 1 < 1 < 1 < 1 NOV < 2 < 1 < 5 < 11 < 2 < 4 < 1 9 < 2 < 1 < 1 < 2 < 2 DEC < 1 < 3 < 6 < 4 < 4 < 3 < 2 2015 JAN < 2 < 7 < 6 < 11 < 8 < 6 < 4 < 9 < 2 < 1 < 1 < 2 < 2 FEB < 3 < 6 < 5 < 8 < 9 < 5 < 3 < 3 < 1 < 1 < 1 < 1 < 1 MAR < 13 < 2 < 3 < 8 < 4 < 3 < 2 < 14 < 1 < 1 < 1 < 1 < 1 APR < 5 < 1 < 2 < 6 < 10 < 3 < 2 < 3 < 1 < 1 < 1 < 1 < 1 MAY < 7 < 1 < 1 < 1 < 3 < 3 < 1 < 3 < 1 < 1 < 1 < 1 < 1 JUN < 13 < 1 < 2 < 2 < 2 < 2 < 1 < 3 < 1 < 1 < 1 < 1 < 1 JUL < 2 < 1 < 2 < 4 < 3 < 2 < 1 < 5 < 1 < 1 < 1 < 1 < 1 3 < 4 < 1 < 5 < 1 < 1 < 1 < 1 < 1 AUG < 1 < 1 < 2 < 6 SEP < 1 < 2 < 3 < 3 < 3 < 2 < 1 < 7 < 1 < 1 < 1 < 1 < 1 OCT < 2 < 4 < 5 < 9 < 4 < 7 < 2 < 2 < 1 < 1 < 1 < 1 < 1 NOV < 2 < 4 < 10 < 21 < 7 < 7 < 5 < 20 < 1 < 1 < 1 < 1 < 1 6 < 5 < 5 < 11 < 1 < 1 < 1 < 1 < 1 DEC < 1 < 2 < 4 < 11 ENTEROCOCCUS BATHING WATER LIMITS (Only in effect at Inshore Stations) A) Single sample shall not exceed 104/100 mL as a result of wastes discharged. B) 30-day Geometric Mean shall not exceed 35/100 mL as a result of wastes discharged. Shore station sampling is conducted for monitoring purposes only, not compliance determination. App 3.6 - 3 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 1 1 1 1 1 1 1 1 1 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 Inshore Stations (Bottom) IL3 IL4 IL5 IL6 IL7 1 < 1 < 1 < 1 1 < 1 < 1 < 1 < 1 1 1 1 1 1 4 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 1 < 1 4 1 3 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 1 < 1 < 1 < 1 < 1 < 1 20 1 3 4 16 4 1 < 1 < 1 1 < 1 < 1 1 < 1 1 3 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 1 < 1 < 1 < 1 < 1 < 1 < 1 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 1 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < 1 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 1 1 1 1 1 1 1 1 1 < < < < < < < < < < < < < < < < < < < < < < < < 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 1 1 1 1 1 1 1 1 1 Appendix 3.6 (Continued) Shellfish Harvesting Standards All 2014 and 2015 shoreline and inshore results were used to determine 6-month median and percent greater than 230/100 ml values [Rain data included] COMPLIANCE WITH SHELLFISH HARVESTING LIMIT (Six - Month Median) Month 2014 JAN FEB MAR APR MAY JUN JUL AUG SEP OCT NOV DEC 2015 JAN FEB MAR APR MAY JUN JUL AUG SEP OCT NOV DEC S1 12 12 12 10 9 9 9 12 13 20 22 20 20 18 18 10 13 12 12 12 10 14 8 7 S2 4 4 4 4 4 4 4 4 4 4 4 11 12 13 14 7 5 4 4 4 4 8 10 12 S3 18 18 18 18 18 18 18 18 18 18 18 18 21 23 18 17 12 5 7 8 8 12 17 18 Shore Stations S5 S6 55 30 31 39 31 42 29 34 30 42 28 24 29 19 29 18 25 18 30 18 30 15 33 20 30 20 20 19 20 21 17 21 17 21 17 16 17 15 16 21 21 18 24 20 39 20 43 20 S7 9 10 12 16 18 14 16 17 12 16 17 21 21 14 12 11 8 7 8 11 14 16 18 17 SB 4 4 4 1 1 1 3 8 11 10 8 8 8 7 4 5 4 4 4 4 7 7 7 6 SM 48 45 47 47 47 37 37 43 47 43 49 55 46 39 38 41 38 38 48 51 48 50 45 41 IL2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 Inshore Stations (Surface) IL3 IL4 IL5 IL6 IL7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 3 1 1 1 1 3 1 1 1 1 2 1 1 1 1 IL2 1 1 1 1 1 1 1 1 1 1 1 2 1 2 1 1 1 1 1 1 1 1 1 1 Inshore Stations (Bottom) IL3 IL4 IL5 IL6 IL7 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 3 5 1 1 1 3 5 1 1 1 1 4 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 4 1 1 1 1 5 1 1 1 1 COMPLIANCE WITH SHELLFISH HARVESTING LIMIT (Six - Month Percent over 230/100 mL) 11% 0% 4% 10% 12% 0% 0% 15% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 2014 JAN 11% 0% 4% 7% 12% 0% 0% 15% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% FEB 11% 0% 4% 4% 15% 4% 0% 15% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% MAR 11% 0% 4% 4% 15% 4% 4% 19% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% APR 7% 0% 0% 0% 15% 4% 4% 15% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% MAY 4% 0% 0% 0% 4% 4% 4% 8% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% JUN 4% 0% 0% 4% 4% 4% 4% 4% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% JUL 4% 0% 0% 4% 8% 4% 4% 4% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% AUG 7% 0% 0% 7% 4% 0% 4% 4% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% SEP 12% 0% 0% 11% 4% 0% 4% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% OCT 12% 0% 0% 11% 4% 0% 4% 4% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% NOV 8% 4% 0% 11% 7% 4% 4% 8% 3% 3% 3% 3% 3% 3% 3% 3% 3% 3% DEC 2015 JAN 8% 8% 0% 10% 11% 12% 4% 12% 3% 3% 3% 3% 3% 3% 3% 3% 3% 3% 8% 8% 0% 10% 7% 12% 4% 12% 3% 3% 3% 3% 3% 3% 3% 3% 3% 3% FEB 8% 8% 0% 11% 11% 12% 4% 15% 3% 3% 3% 3% 3% 3% 3% 3% 3% 3% MAR 4% 8% 0% 7% 11% 12% 0% 15% 3% 3% 3% 3% 3% 3% 3% 3% 3% 3% APR 4% 8% 0% 7% 14% 12% 0% 12% 3% 3% 3% 3% 3% 3% 3% 3% 3% 3% MAY 4% 4% 0% 7% 11% 8% 0% 8% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% JUN 4% 0% 0% 4% 8% 0% 0% 4% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% JUL 4% 0% 0% 4% 11% 0% 0% 4% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% AUG 0% 0% 0% 0% 7% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% SEP 4% 0% 4% 7% 11% 0% 0% 4% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% OCT 4% 0% 4% 11% 7% 0% 4% 4% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% NOV 4% 0% 4% 11% 7% 0% 4% 4% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% DEC SHELLFISH HARVESTING LIMITS (Only in effect at Inshore Stations) A) 6-month median shall not exceed 70/100 mL as a result of wastes discharged. B) No more than 10% >230/100 mL in any 6 month period as a result of wastes discharged. Shore station sampling is conducted for monitoring purposes only, not compliance determination. App 3.6 - 4 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 3% 3% 7% 6% 7% 7% 3% 3% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 0% 3% 3% 3% 3% 3% 3% 0% 0% 0% 0% 0% 0% 0% Appendix 3.6 (Continued) Offshore Microbiological Sampling Sites All 2014 and 2015 offshore results from monthly microbiological sampling are shown [Rain data included] Month Offshore Stations Total Coliform 6C 1 1 1 5 1 1 1 1 1 1 1 8C 1 1 1 1 1 1 1 2 1 1 1 Fecal Coliform 9C 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 5 1 1 6C 1 1 1 1 1 1 1 1 1 1 1 120 1 1 2 2 2 2 2 2 2 1 1 1 8C 1 1 1 1 1 1 1 1 1 1 1 150 1 1 2 2 2 2 2 2 2 1 1 1 9C 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 2 2 2 2 2 2 1 1 1 Enterococcus 6C 1 1 1 1 1 1 1 1 1 1 1 70 1 1 1 1 1 1 1 1 1 1 1 1 8C 9C 2014 JAN < < < < < < < < 1 < 1 < < < < < 1 < 1 < FEB < < < < < < < 1 < MAR 20 < < < < < < 1 < 1 APR < < < < < < < 1 < 1 < MAY < < < < < < < 1 < 1 < JUN < < < < < < < 1 < 1 < JUL < < < < < < 1 < AUG 1 < < < < < < < 1 < 1 < SEP < < < < < < < 1 < 1 < OCT < < < < < < < 1 < 1 < NOV 5600 8600 < < DEC 66 1 2015 JAN < 1 < 1 < < < < < < 1 < 1 < < < < < 1 < 1 < 1 FEB 1 < < < < < < < < 1 < MAR 1 1 1 < 1 < < < < < < 1 < 1 < 1 APR < 1 < < < < < < 1 < 1 < 1 MAY < 1 < < < < < 1 < 1 < 1 JUN < < < 1 < 1 JUL 2 7 < 1 < < < < < < 1 < 1 < 1 AUG < 1 < < < < < < 1 < 1 < 1 SEP 200 < 200 < 200 < < < < < 1 < 1 OCT < 1 < 1 < < < < < 1 < 1 < 1 NOV < 1 < < < < < 1 < 1 < 1 DEC 1 OFFSHORE RECEIVING WATER LIMITS: A) Total coliform single sample shall not exceed 10,000/100 mL as a result of wastes discharged. B) Fecal coliform single sample shall not exceed 400/100 mL as a result of wastes discharged. C) Enterococcus single sample shall not exceed 104/100 mL as a result of wastes discharged. D) No single sample greater than 1000/100 mL when fecal coliform/total coliform ratio exceeds 0.1 as a result of wastes discharged. NOTE: Since only one sample per month is required at Offshore Stations, compliance with geometric mean standards is not assessed. App 3.6 - 5 Appendix 3.7 Spatial and Temporal Trends in Fecal Coliform and Enterococcus Concentrations Appendix 3.7 Spatial and Temporal Trends in Fecal Coliform Concentrations No Fecal coliform data available prior to 1984 Mean fecal coliform concentrations from shoreline (S1, S2, S3, S5, S6, S7, SB, and SM), inshore (IL2, IL3, IL4, IL5, IL6, IL7), and offshore (9C, 8C, 7C) sampling locations (Figure 3.1) from 1984 through 2015. Spatial trends are depicted by depth and the relative location of shoreline geographic landmarks (CB = Cabrillo Beach, WP = White Point, PB = Portuguese Bend, AC = Abalone Cove, BC = Bluff Cove, and MC = Malaga Cove). The outfall discharge zone is in 60 meters of water off White Point. Temporal trends are assessed by comparison of three discrete sampling periods (1984-2002, 2003-2013, and 2014-2015). No fecal coliform data are available for the period prior to 1984, when the JWPCP only provided primary treatment. [Rain data excluded]. App 3.7 - 1 Appendix 3.7 Spatial and Temporal Trends in Enterococcus Concentrations No Enterococcus data available prior to 1984 Mean enterococcus concentrations from shoreline (S1, S2, S3, S5, S6, S7, SB, and SM), inshore (IL2, IL3, IL4, IL5, IL6, IL7), and offshore (9C, 8C, 7C) sampling locations (Figure 3.1) from 1984 through 2015. Spatial trends are depicted by depth and the relative location of shoreline geographic landmarks (CB = Cabrillo Beach, WP = White Point, PB = Portuguese Bend, AC = Abalone Cove, BC = Bluff Cove, and MC = Malaga Cove). The outfall discharge zone is in 60 meters of water off White Point. Temporal trends are assessed by comparison of three discrete sampling periods (1984-2002, 2003-2013, and 2014-2015). No enterococcus data are available for the period prior to 1984, when the JWPCP only provided primary treatment. [Rain data excluded]. App 3.7 - 2