The path to new discoveries
Transcription
The path to new discoveries
Vol 15 – 1/2013 The path to new discoveries Highly reliable gene expression profiling Isolation of B cells by MACSxpress® Technology for sensitive and concordant microarray analysis (p. 10) Multiple myeloma research Automated purification of CD138+ cells from whole bone marrow for FISH analysis (p. 18) Malaria research Rapid, automated purification of Plasmodium falciparum– infected erythrocytes for biochemical studies (p. 31) From basic to clinical research in immunology Contents Page News Enjoy our redesigned website 4 Meet our best kits yet 5 As fast as it gets: cell isolation from whole blood with MACSxpress® Technology 6 Automated workflows in immunology research – using simplicity to control complexity 7 The CliniMACS® CD34 Reagent System – a landmark in cellular therapy 8 Reports MACSxpress® Technology allows isolation of B cells with high purity for sensitive and concordant microarray-based gene expression profiling Angela Mekes, Stephanie Soltenborn, Ines Dischinger, Volker Huppert, and Bernhard Gerstmayer 10 Isolation of monocytes with high purity directly from whole blood for transcriptome analysis in translational research Christelle Foucher, Sébastien Vachenc, Alexandre Meniccaci, Bernhard Gerstmayer, Gwenola Henrion, Uwe Janssen, Darren Wilbraham, Karine Le Malicot, and Jean-Claude Ansquer 14 An automated method for purification of CD138+ cells from whole bone marrow samples for multiple myeloma research Hossain Mossafa and Sabine Defasque 18 Highly purified peripheral blood γ/δ T cells isolated by MACS® Technology respond to NOD2 ligand Lothar Marischen, Hans-Heinrich Oberg, Christian Peters, Sandra Ussat, Hoa Ly, Dieter Kabelitz, and Daniela Wesch 20 Efficient and rapid in vitro generation of fully functional multi-virus-specific CD4+ and CD8+ T cells Anna Foerster-Marniok, Verena Traska, Olaf Brauns, Sven Kramer, Jürgen Schmitz, Mario Assenmacher, and Anne Richter 24 Mouse NK cells isolated to high purity by MACS® Technology are fully functional Kathrin Meinhardt, Irena Kroeger, Sabine Mueller, and Evelyn Ullrich 28 Measuring prolyl aminopeptidase activity in extracts prepared from magnetically purified malaria parasites Fabio L. da Silva, Donald L. Gardiner, and Katharine R. Trenholme 31 MACS&more (ISSN 1610-4994) is published by Miltenyi Biotec GmbH. Editorial board: Anthony Allen, Adrian Arechiga, Conrad Beckers, Caroline Blumer Toti, Sven Brosch, Oliver Burlon, Vincent Chu, Steven Dublin, Guy Hewlett, Christoph Hintzen, Jennifer Horner, Volker Huppert, Claudia Loske, Joumana Masri, Simon Mauch, Mariette Mohaupt, Shane Oram, Gerd Steffens, Nanette von Oppen, Ilka Wege, Raif Yücel Editor: Ralph Schaloske Graphics & Layout: Miltenyi Biotec GmbH, Graphics team Miltenyi Biotec GmbH Friedrich-Ebert-Straße 68, 51429 Bergisch Gladbach, Germany Phone +49 2204 8306-0 [email protected] Unless otherwise specifically indicated, Miltenyi Biotec products and services are for research use only and not for therapeutic or diagnostic use. autoMACS, CliniMACS, gentleMACS, MACS, MACSmix, MACSQuant, MACSxpress, MultiMACS, PepTivator, Vio, and VioBlue are registered trademarks or trademarks of Miltenyi Biotec GmbH or its affiliates in Germany, the United States, and/or other countries. All other trademarks mentioned in this document are the property of their respective owners and are used for identification purposes only. Copyright © 2013 Miltenyi Biotec GmbH. All rights reserved. 2 MACS & more Vol 15 • 1/2013 www.miltenyibiotec.com MACS&more MACS&more Vol.Vol. 14 •15 2/2012 • 1/2013 Dear Researcher, Detailed research on the properties and function of individual immune cell types deepens our understanding of their role in health and disease. With more than twenty years of experience in biomedical research, Miltenyi Biotec provides a multitude of sophisticated tools for immune cell isolation – helping advance research towards the development of future therapies. Usually, the immune system effectively protects the body against disease. However, there are myriads of scenarios in which the immune system is not able to cope with certain challenges, for example, the escape of tumor cells, prolonged inflammation, or autoimmune reactions, all of which can lead to debilitating disease. The immune system is based on a highly organized interplay between a multitude of different cell types each playing a distinct role. In order to accurately analyze the function and characteristics of a specific immune cell type in health and disease, it is essential to use a pure cell population. Miltenyi Biotec offers the tools to isolate immune cells and subsets reliably and efficiently. In this MACS&more issue we present a selection of reports featuring our solutions for magnetic cell separation in a broad spectrum of immunology-related applications. lipid-lowering drug fenofibrate. The analysis of differentially expressed genes enabled the construction of functional networks. For their research into malignant cells from multiple myeloma, Hossain Mossafa and Sabine Defasque required a reliable, fast, and standardized technique to enrich CD138+ plasma cells from a large number of bone marrow samples. The autoMACS Pro Separator and Whole Blood CD138 MicroBeads met all these requirements. Using the isolated CD138+ cells for FISH analysis, the authors were able to reliably detect chromosomal abnormalities that are characteristic for malignant plasma cells. Lothar Marischen et al. investigated the function of the innate receptor NOD2 expressed on γ/δ T cells. For their studies, the authors needed γ/δ T cells and monocytes with an exceptionally high level of purity. MACS® Technology enabled Marischen et al. to isolate both cell types from PBMCs to purities of greater than 99%. Likewise, they depleted either cell type from PBMCs to residual percentages of less than 0.1%. Their results support the notion that γ/δ T cells play a role in anti-bacterial immunity. spleen turned out to be challenging. As the C57BL/6 strain is an important model in preclinical NK cell research, Meinhardt et al. set out to solve this issue. They further optimized the depletion procedure and developed a new depletion cocktail, which is now part of the NK Cell Isolation Kit II. This kit enables the isolation of NK cells to high purities from both BALB/c and C57BL/6 spleens. The report by Meinhardt et al. is a great example of how our collaboration with scientists using Miltenyi Biotec products can lead to the development of exciting new research tools. In their quest to identify new targets for antimalarial drug development, Fabio da Silva et al. required preparations of Plasmodium falciparum-infected red blood cells (RBCs) with high purities. To this end, the authors magnetically enriched infected RBCs using the autoMACS Pro Separator. Unlike immunomagnetic cell isolation based on MACS Technology, their approach did not involve a magnetic labeling step. Instead the parasites labeled themselves: During development P. falciparum digests the host cell’s hemoglobin. This leads to the formation of insoluble hemozoin, which has paramagnetic properties. Da Silva et al. were able to identify prolyl aminopeptidase activity in extracts prepared from the magnetically enriched parasites – a first step towards the identification of a potential target for drug development. The reports by Angela Mekes et al. and Christelle Foucher et al. highlight the intriguing benefits of our tools for cell isolation directly from whole blood for subsequent microarray-based analyses. Using the new MACSxpress® Technology, Mekes et al. showed that B cells isolated from whole blood enabled a more conclusive analysis of cell type–specific gene expression than unseparated whole blood or PBMCs. MACSxpress Technology thus provides an excellent basis for biomarker research. Adoptive transfer of antigen-specific T cells holds great potential for the control of infections after stem cell transplantations. To enhance research into virus-specific T cells, Anna Foerster-Marniok et al. developed a fast and straightforward protocol for the generation and enrichment of T cell populations that are specific for three different viruses. The authors used Miltenyi Biotec’s PepTivator® Peptide Pools for cell stimulation and the MACS® Cytokine Secretion Assay technology to isolate the virus-specific T cells. Isolated virus-specific T cells were fully functional and could be expanded easily. Foucher et al. used the autoMACS® Pro Separator in combination with Whole Blood CD14 MicroBeads for the fast and reliable isolation of monocytes. The authors analyzed the transcriptome of monocytes purified from whole blood obtained from healthy donors before and after treatment with the For their studies on the function of NK cells, Kathrin Meinhardt et al. obtained highly purified cells from BALB/c mouse spleen using two strategies based on MACS Technology: positive selection and depletion of non-NK cells. However, the isolation of high-purity NK cells from C57BL/6 mouse MACS&more online: www.miltenyibiotec.com/macs&more www.miltenyibiotec.com We wish you an inspiring read. Your MACS&more team Vol 15 • 1/2013 MACS & more 3 NEWS Enjoy our redesigned website With you, the busy scientist, in mind, we have redesigned our website. Various new features make miltenyibiotec.com faster, easier, and more intuitive. Save time with easy navigation The simple interface and straightforward navigation guides you to the information you need in no time. The revamped miltenyibiotec.com offers you in-depth insight into products and services for research and its translation into clinical applications. You will also find comprehensive information on individual research areas and numerous support options, as well as general company information. Easy navigation is key to finding appropriate information fast. Start your immunology experiment here To keep you up to date on our wide range of products for your immunology research, we offer a special section on immunologyrelated topics, including autoimmunity, tumor immunology, dermatology, allergy, and infection and inflammation. Discover a plethora of smart products for your sample preparation, cell separation, flow cytometry, molecular applications, and pre-clinical imaging. Also benefit from numerous references and downloads. Find the products you need in just a few clicks The easy-to-use product finder helps you find the right solution for your specific needs, be it an instrument, software, reagents, or consumables. Simply select the appropriate parameters and get started. The product finder guides you to the products you need. Welcome to the immunologist’s resource. 4 MACS & more Vol 15 • 1/2013 Start enjoying the new features today at www.miltenyibiotec.com www.miltenyibiotec.com NEWS Meet our best kits yet Miltenyi Biotec introduces the next generation of immune cell isolation kits. Exciting new updates have been made to some of our most popular kits, resulting in new kits that offer unmatched purity, greater recovery, and faster cell isolation. Miltenyi Biotec’s continuous quest for product labeling, and in many cases it became possible refinement has led to the next generation of to omit washing steps. Mouse NK cells, for kits for the isolation of plasmacytoid dendritic example, can now be isolated in less time cells (PDCs), monocytes, NK cells, pan T cells, with unrivaled purity using the new NK Cell and T cell subsets. Updates were made on Isolation Kit II. Pure pan monocytes, pan various levels. Two kits for the isolation of T cells, as well as CD4+ and CD8+ T cells can human PDCs were revamped with depletion be obtained in as little as 25 minutes and the cocktails that were redeveloped from scratch, isolation of human Treg cells or NK cells can allowing for unmatched PDC purity and be accomplished up to 20 minutes faster than recovery. Regular communication with users before. of our products allowed us to optimize the “The original kits were already very effective kits according to the users’ specific needs. The and immensely popular. However, when we Pan Monocyte Isolation Kit, for example, was realized that there was a way to tweak them, enhanced for excellent recovery of human we didn’t hesitate to go the extra mile,” points classical, non-classical, and intermediate out Dr. Claudia Loske, Product Manager, Immunology. monocyte subsets. Besides ensuring outstanding separation Miltenyi Biotec is dedicated to continuously performance, the protocols of various kits were advancing products that provide researchers modified to save valuable time. Systematic with the best possible tools – stay tuned for the optimization of the reagents allowed us to next updates. minimize, for example, the time used for cell www.miltenyibiotec.com If you have questions about the individual kits and how they can enhance and accelerate your research, contact our technical support team. Get quick, helpful, local support from a support team in your specific country. Contact information is available at www.miltenyibiotec. com/support. To get immediate support online, use the Live Chat feature on the starting page of our website. Vol 15 • 1/2013 MACS & more 5 NEWS As fast as it gets: cell isolation from whole blood with MACSxpress® Technology Isolating leukocytes from large whole blood samples with no time to lose – a challenge numerous labs face every day. Miltenyi Biotec provides the solution: the new MACSxpress® Technology. The MACSxpress CD4 T Cell Isolation Kit, human enables isolation of untouched cells directly from whole blood. Fast, safe, and convenient With the MACSxpress Cell Isolation Kits, Miltenyi Biotec is breaking new ground. The technology enables the fastest isolation of cells from whole blood. “MACSxpress Technology was specifically developed for cell isolation from large whole blood volumes, in a short time, and with great convenience,” explains Volker Huppert, project leader at Miltenyi Biotec’s R&D department. Using MACSxpress Kits it takes only 20 minutes to prepare pure leukocyte subsets from whole blood. This means that the entire MACSxpress Cell Isolation procedure is shorter than the sample preparation step in traditional cell isolation protocols. The short process opens up valuable time for users to accomplish other tasks. As the procedure does not involve any centrifugation step or erythrocyte lysis, less pipetting is required, and aerosol formation is minimized. This high level of safety is particularly relevant when processing untested blood samples, which potentially contain infectious particles. Minimal sample handling also means maintenance of sample integrity and a reduced risk for the user. Large-scale isolation of leukocyte subsets Studies often require numerous tests to be conducted with the same sample. Such multiparameter assays require large numbers of isolated cells, which are obtained using MACSxpress Cell Isolation Kits. Using these How it works MACSxpress Cell Isolation is based on a simple procedure: Erythrocytes are aggregated and sedimented without centrifugation. Non-target cells are removed by immunomagnetic depletion with MACSxpress Beads, yielding target cells of high purity. Simple yet powerful MACSxpress Kits are the perfect solutions for a wide range of applications, whether in basic or translational immunology research. The procedure involves only minimal sample handling, which makes MACSxpress Technology the ideal choice for omics studies, biomarker research, or for drug discovery research. Multicenter research studies can also benefit from the new technology: “Users don’t need any special expertise, equipment requirements are minimal, and experiments can be carried out in any lab in no time. The simplicity of MACSxpress Technology is compelling,” Volker Huppert points out. MACSxpress Cell Isolation Kits are currently available for B cells, naive B cells, NK cells, pan T cells, CD4+ T cells, and CD8+ T cells. Also read the report on page 10 of this MACS&more issue: Mekes et al. used MACSxpress Technology to isolate B cells for sensitive gene expression analysis. For general information on MACSxpress Kits visit www.macsxpress.com Cell isolation with MACSxpress Technology Labeling kits up to 30 mL of whole blood can be processed in a single run. “Especially when isolating cells with low frequencies, such as NK cells, it is crucial to start with a large sample volume in order to end up with a sufficient number of cells for downstream analysis. MACSxpress Kits meet these requirements perfectly,” says Volker Huppert. Separation 20 min Density gradient centrifugation Centrifugation without brake 35 min 0 10 20 30 Time (min) MACSxpress Cell Isolation versus density gradient centrifugation. A leukocyte subset isolation with MACSxpress Technology takes less time than a preparative density gradient centrifugation. With MACSxpress Kits whole blood samples of up to 30 mL can be processed, whereas density gradient centrifugation has a maximum capacity of 15 mL per sample. 6 MACS & more Vol 15 • 1/2013 www.miltenyibiotec.com NEWS Automated workflows in immunology research – using simplicity to control complexity Many research projects focusing on immune cell biology require a high sample throughput enabling complex, large-scale experiments with the option to evaluate a high number of parameters simultaneously. Miltenyi Biotec and major liquid handling system providers are working together to provide platforms for sophisticated automated workflows, including cell separation, cell culture, and functional assays. Facing the challenge With the growing complexity of experiments in today’s immunology research, the need for high-throughput automated workflow solutions increases. Workflow automation ensures consistent and reliable results through highly standardized, operator-independent procedures. This is of particular relevance in translational research, where multiple centers work together towards a common goal. The minimization of laborious manual handling steps has many advantages and amenities. Productivity increases, as experiments can continue over night and on weekends, and, instead of performing tedious pipetting steps, researchers can focus on other tasks. Automation is key Miltenyi Biotec collaborates closely with major providers of liquid handling systems (LHS), including Tecan® and Hamilton Robotics, towards the development of automated workflows supporting most demanding research applications. An example of a project the Mo-DC differentiation status utilizing in the planning is a platform for automated the reagents of the Mo-DC Differentiation monitoring of immune cell activity in the Inspector. context of tumor formation. The platform “As complex the workflow may be, this platform is based on the compelling synergy of LHS simplifies matters – the operator just starts and Miltenyi Biotec instruments, including the process and walks away,” points out Dr. the MultiMACS™ Cell24 Separator for cell Raif Yücel, Product Manager Automation separation and the MACSQuant® Analyzer for at Miltenyi Biotec. “Automation not only flow cytometric quality control and endpoint saves a lot of time, it also makes for excellent analysis. reproducibility.” In the next step of the workflow, differentiated Complex experiment workflow – Mo-DCs are turned into tumor antigen– walk-away processes presenting cells by incubation with tumorThe automated workflow for monitoring specific peptides. Finally, the antigenimmune responses starts with the isolation presenting Mo-DCs are cocultured with the of monocytes and T cells from PBMCs T cells, while the MACSQuant Analyzer, in by the MultiMACS Cell24 Separator. The combination with MACS Cytokine Secretion MACSQuant Analyzer then automatically Assays, determines the T cells’ cytokine assesses purity and yield of the separated response. The magnitude of cytokine cell populations. Isolated monocytes are production allows valuable conclusions on the differentiated into monocyte-derived dendritic repertoire of tumor antigen-specific T cells in cells (Mo-DCs) and T cells are cultured for the PBMCs. later use. The MACSQuant Analyzer monitors “The huge versatility of the LHS and our instruments, cell separation reagents, antibodies, and cell culture products opens up vast possibilities for basic and translational research,” Dr. Yücel says. “Workflows can be adapted to meet specific cell isolation requirements, culture conditions, and assays.” For more information visit www.macslabautomation.com The MultiMACS Cell24 Separator integrated into the LHS for automated high-throughput cell separation. www.miltenyibiotec.com Vol 15 • 1/2013 MACS & more 7 NEWS The CliniMACS® CD34 Reagent System – a landmark in cellular therapy Miltenyi Biotec strives for improvement of scientific understanding and medical progress by providing products and services that advance biomedical research and cellular therapy. Working together with many internationally recognized professionals in centers throughout the world, we design, support, and coordinate clinical studies in areas such as hematological malignancies and stem cell therapies. AML is characterized by the rapid growth of myeloid bone marrow cells. Transplantation of allogeneic hematopoietic stem cells (HSCT) is regarded as the single most effective treatment for the prevention of reoccurrence of the disease in patients in complete remission after induction therapy.1,2 However, major complications are associated with allogeneic stem cell transplantation, such as acute and chronic graft-versus-host disease (GvHD). Depending on the severity, GvHD can be associated with increased morbidity and mortality following transplantation. Since both acute and chronic GvHD are caused by the presence of donor T cells in the graft, depletion of graft T cells (TCD) before transplantation seemed to be a suitable preventative strategy. However this strategy was not universally accepted by clinicians because of doubts about the efficacy of the engineered graft. The uncertainty associated with treatment with HSCT was addressed by a recent study carried out by researchers from the Blood and Marrow Transplant Clinical Trials Network (Study BMT CTN 0303). They reported that TCD and HSCT, following intensive chemotherapy of AML patients, can be performed reproducibly in a multicenter setting using the CliniMACS CD34 Reagent System.³,⁴ The data from the BMT CTN 0303 study were compared to that of a similar study in which patients had received a hematopoietic stem cell graft that was not T cell–depleted (BMT CTN 0101). The data from this comparison demonstrated that TCD with the CliniMACS CD34 Reagent System, as the sole method for preventing GvHD, resulted in a low incidence of acute and chronic GvHD in patients. This method of TCD did not have any negative impact on engraftment success, patient survival, or relapse rate.⁵ 8 MACS & more Vol 15 • 1/2013 The effect on the occurrence of chronic GvHD was especially notable: at the 2-year time point, chronic GvHD occurred with a frequency of only 19% in BMT CTN 0303 compared to 50% in the study with the non-engineered graft, a statistically significant difference. Due to the highly efficient TCD there was no need for any immunosuppressive prophylaxis post transplantation, a feature that may influence quality of life in a positive way. Furthermore, the transplantation of a T cell–depleted graft in the absence of an immunosuppressive agent may provide an ideal platform for further adoptive cell therapy post transplantation. 3. Devine, S.M. et al. (2011) Biol. Blood Marrow Transplant. 17: 1343–1351. 4. Keever-Taylor, C.A. et al. (2012) Biol. Blood Marrow Transplant. 18: 690–697. 5. Pasquini, M.C. et al. (2012) J. Clin. Oncol. 30: 3194–3201. The CliniMACS® CD34 Reagent System components, Instrument, CD34 Reagent, Tubing Sets, and PBS/ EDTA Buffer, are manufactured and controlled under an ISO 13485 certified quality system. In Europe, the CliniMACS System components are available as CE-marked medical devices. In the USA, the CliniMACS System components, including the CliniMACS Reagents, are available for use only under an approved Investigational New Drug (IND) application or Investigational Device Exemption (IDE). CliniMACS MicroBeads are for research use only and not for use in humans. References 1. Cornelissen, J.J. et al. (2007) Blood 109: 3658– 3666. 2. Koreth, J. et al. (2009) JAMA 301: 2349–2361. www.miltenyibiotec.com Report The CliniMACS® Prodigy Next generation of integrated cell processing Automated cell processing from cell sample to final product • Cell washing • Cell culture • Density gradient separation • Fully automated • MACS® Cell Separation • Closed system At the time of publication, the components of the CliniMACS Prodigy line are for research use only and not for human therapeutic or diagnostic use. For an updated regulatory status in your country, please ask your local representative. www.miltenyibiotec.com clinimacs-prodigy.com Vol 15 • 1/2013 MACS & more 9 Report MACSxpress® Technology allows isolation of B cells with high purity for sensitive and concordant microarray-based gene expression profiling Angela Mekes, Stephanie Soltenborn, Ines Dischinger, Volker Huppert, and Bernhard Gerstmayer Miltenyi Biotec GmbH, Bergisch Gladbach, Germany Introduction Microarray-based gene expression profiling is an excellent tool for the identification of biomarkers in blood cells. However, whole blood and PBMCs, which are frequently used for biomarker research, are complex mixtures of many different cell types and subsets. Therefore, subtle changes in gene expression within a particular subpopulation can escape detection, if these complex mixtures are used for analysis. There is also a large variability in the proportions of blood cell subsets among different donors, which can further mask expression changes within a particular cell type. The use of isolated blood cell subsets has greatly enhanced biomarker research. Lyons et al.¹ used purified leukocyte subsets isolated by MACS® Technology for their biomarker research in systemic lupus erythematosus. The authors identified disease-associated differentially expressed genes in purified CD4+ cells and monocytes that were not detectable in PBMCs. Similarly, Lee et al.² identified signatures in magnetically purified CD8+ T cells in their biomarker research on Crohn’s disease and ulcerative colitis, which they otherwise would not have detected in unseparated PBMCs. 10 MACS & more Vol 15 • 1/2013 For omics research, in general, it is desirable to have simple and short procedures that are highly reproducible and require minimal handling. The novel MACSxpress® Technology for the fast isolation of cells directly from whole blood meets all these requirements. Using this technology, we isolated B cells from different donors to high purity. The obtained gene expression patterns were distinct from the corresponding whole blood and PBMC samples and showed enrichment of B cell– specific gene transcripts as well as depletion of non-B cell–related gene transcripts. Materials and methods B cell isolation For the isolation of B cells, 30 mL of EDTAanticoagulated whole blood were incubated with the MACSxpress B Cell Isolation Cocktail for 5 min in a 50-mL tube. During the incubation step, the tube was gently rotated using the MACSmix™ Tube Rotator. The B Cell Isolation Cocktail contains antibodyconjugated MACSxpress Beads magnetically labeling the non-target cells. Following the labeling step, the tube was placed in the magnetic field of a MACSxpress Separator. The labeled non-target cells adhered to the tube wall and the aggregated erythrocytes sedimented to the bottom, whereas the supernatant contained pure unlabeled B cells, which could immediately be used for further experiments. Samples obtained from four healthy donors were processed. Flow cytometry To assess the purity of B cells after isolation with MACSxpress Technology, cells were labeled with CD45-VioBlue®, CD19-APC, and CD20-PE, before and after separation. Flow cytometry was performed on the MACSQuant® Analyzer. For comparison, PBMCs prepared by density gradient centrifugation from the same whole blood sample were analyzed. Sample preparation for microarray analysis RNA was extracted from whole blood (stabilized with PAXgene® Blood RNA Tubes) using the PAXgene Blood RNA Kit (Qiagen), and from PBMCs and isolated B cells using the NucleoSpin® RNA II system (Macherey-Nagel). RNA quality, i.e., RNA integrity number (RIN), was assessed using the Agilent 2100 Bioanalyzer platform and the integrated software. For linear T7-based amplification, 50 ng of total RNA were used. Cy™3-labeled cRNA was prepared www.miltenyibiotec.com Report Whole blood PBMCs Isolated B cells 97.98% CD19-APC 12.77% CD19-APC CD19-APC 7.43% CD20-PE CD20-PE Donor % B cells in whole blood sample % B cells in PBMCs % B cells after MACSxpress Separation A 4.27 10.85 93.2 C 5.06 10.01 97.06 D 7.43 12.77 97.98 E 5.76 10.95 90.82 means±sd 5.63±1.35 11.15±1.16 94.77±3.35 Figure 1 Flow cytometric analysis of whole blood, PBMCs, and isolated B cells. Cells were stained as indicated in the materials and methods section, and analyzed on the MACSQuant Analyzer. Data were gated on leukocytes. Dot plots are shown for one representative donor. The table summarizes the results for samples from four different donors. by using the Agilent Low Input Quick Amp Labeling Kit (Agilent Technologies) following the manufacturer’s protocol. Hybridization of Agilent Whole Genome Oligo Microarrays Hybridization was performed according to the Agilent 60-mer oligo microarray processing protocol using the Agilent Gene Expression Hybridization Kit (Agilent Technologies). Briefly, 1.65 μg of Cy3-labeled fragmented cRNA in hybridization buffer were hybridized overnight (17 hours, 65 °C) to Agilent Whole Human Genome Oligo Microarrays 4×44K V1 using Agilent’s recommended hybridization chamber and oven. Subsequently, the microarrays were washed once with the Agilent Gene Expression Wash Buffer 1 for 1 min at room temperature followed by a second wash with pre-heated Agilent Gene Expression Wash Buffer 2 for 1 min at 37 °C. The last washing step was performed with acetonitrile for 30 s at room temperature. Microarray analysis Fluorescence signals of the hybridized Agilent Microarrays were detected using Agilent’s Microarray Scanner System (Agilent Technologies). The Agilent Feature Extraction Software was used to read out and process the microarray image files. The software determines feature intensities (including background subtraction), rejects outliers, and calculates statistical confidences. Whole blood PBMCs Isolated B cells RIN 7.93±0.19 8.63±0.25 8.18±0.51 RNA yield (µg/mL whole blood) 2.6 ±1.96 0.77±0.34 0.064±0.012 Table 1 RIN values and yields for RNA extracted from different sample materials. RNA was extracted as described in the materials and methods section. Values represent samples from four different donors (means±sd). www.miltenyibiotec.com Results and discussion Isolation of B cells with MACSxpress Technology MACSxpress Technology allows the isolation of B cells to excellent purities up to 98% (fig. 1). The average purity was about 95% (n=4). The recovery of B cells isolated from whole blood ranged between 68% and 83%. RNA quality A RIN value of greater than 5 is considered to indicate that RNA quality is sufficient for gene expression profiling experiments³. In our experiments, RNA prepared from whole blood, PBMCs, and purified B cells consistently showed RIN values of approximately 8. RNA yields were sufficient for gene expression profiling experiments (table 1). Microarray analysis Expression analysis of various cell markers in whole blood vs. the purified B cell fraction allowed us to further validate the purity of the isolated B cells (fig. 2). As anticipated CD19+ cells were efficiently enriched, as indicated by a 20-fold increase in light units (≈3,000 LU in whole blood vs. ≈60,000 LU in purified B cells). Vol 15 • 1/2013 MACS & more 11 Report CD14 14,472 14,000 12,000 14,472 13,312 11,323 12,057 10,770 10,000 8,380 8,000 7,208 6,000 4,000 2,000 41 0 44 59 CD19 80,000 qn-normalized raw data 59 70,000 64,112 58,430 57,432 60,000 56,479 50,000 40,000 30,000 20,000 10,000 4,049 0 1,941 3,869 3,639 7,118 5,673 4,261 4,864 qn-normalized raw data HBA1 500,000 450,000 400,000 444,292 425,889 444,292 444,292 350,000 300,000 250,000 200,000 150,000 100,000 50,000 0 157,853 0.0 135,816 28,235 16,610 10,203 1,733 5,120 4,054 MPO qn-normalized raw data 1,600 1,400 1,335 1,000 0.7554416 800 600 585 467 400 318 186 200 127 1.0 224 107 20 23 48 3 3 2 25 2 PF4 qn-normalized raw data 15.0 0.51083195 1,200 0 1,000 900 800 700 600 500 400 300 200 100 0 939 392 291 121 107 76 79 23 TCL1A qn-normalized raw data 6.102 A_Whole_blood D_Whole_blood C_Whole_blood E_Whole_blood A_PBMCs D_PBMCs C_PBMCs E_PBMCs A_Isolated_B_cells D_Isolated_B_cells C_Isolated_B_cells E_Isolated_B_cells qn-normalized raw data 16,000 Likewise, the lymphocyte-associated marker TCL1A showed an increase from ≈10,000 LU to 100,000 LU, whereas CD14 expression was almost absent (≈10,000 LU vs. ≈50 LU). The reticulocyte/erythrocyte–associated marker HBA1 showed high values of ≈450,000 LU in whole blood samples, which was in the range of saturation, while the purified B cells showed a reduced value of ≈5,000 LU. The values for the neutrophil marker MPO were reduced from ≈250 LU to ≈30 LU, and the platelet marker PF4 from ≈400 LU to ≈2 LU. These results confirm that MACSxpress Technology allowed the efficient removal of non-B cells from whole blood. We compared expression profiles of whole blood samples, PBMCs, and purified B cells in an unsupervised cluster analysis with 4,100 genes as input. Genes not associated with 180000 160000 140000 120000 100000 80000 60000 40000 20000 0 161,605 143,146 119,744 83,508 9,865 11,234 A C 17,269 12,168 D E Whole blood 9,567 11,798 15,584 10,849 A C D E PBMCs A C D E Isolated B cells Figure 2 Microarray-based analysis of cell type–specific gene expression. Gene expression analysis was performed as indicated in the materials and methods section. Data indicate quantile-normalized raw data (light units, LU) for whole blood samples, PBMCs, and isolated B cells, from four different donors (A,C,D,E) each. 12 MACS & more Vol 15 • 1/2013 SLA2 KLRD1 MAF LEF1 SRGN ENST00000390352 SIRPG TRA@ ICOS CD3E UBASH3A LAT A_32_P180185 TXK S1PR2 CD8B FLJ22662 CD2 CD3G C4orf18 CSTA GIMAP7 PTGER2 GIMAP8 DUSP6 FCN2 FCN1 CD33 USP6NL EBF1 MS4A1 FCRL2 IL7 COBLL1 BANK1 BLNK CD19 L0C283663 AIM2 FCRLA PNOC CPNE5 WDR34 Figure 3 Gene expression profiling of cells isolated by MACSxpress Technology. Gene expression analysis was performed as indicated in the materials and methods section. Data were extracted from an unsupervised heatmap (input 4,100 genes) and are shown for whole blood samples, PBMCs, and isolated B cells, from four different donors each. www.miltenyibiotec.com Report B cells, such as CD3, CD8, and CD33, were not represented in the purified B cell fraction. In contrast, the B cell marker CD19 was highly abundant in this fraction (fig. 3). Overall, the heat map reveals considerable differences between purified B cells and the unpurified fractions (whole blood and PBMCs). A twoway analysis of variance showed that 2,111 of 4,100 genes were significantly differentially expressed in purified B cells vs. unpurified cells. This suggests that subtle yet significant gene expression changes within the B cell fraction might escape detection if unpurified cells are used for analysis. Conclusion • Gene expression analysis of isolated cell populations is more sensitive and conclusive than analysis of whole blood or PBMCs. • MACSxpress Technology is a fast method (as little as 20 min) for the efficient isolation of cells from large whole blood volumes (up to 30 mL) requiring minimal handling steps. • Isolated B cells show high purities. • The isolation procedure is gentle to cells. Cells can be immediately used for downstream applications. • RNA extracted from isolated cells is of high quality and suitable for gene expression analysis. • MACSxpress Technology is an ideal method for the isolation of cells prior to gene expression analysis. References 1. Lyons, P.A. et al. (2010) Ann. Rheum. Dis. 69: 1208–1213. 2. Lee, J.C. et al. (2011) J. Clin. Invest. 121: 4171– 4179. 3. Fleige, S. and Pfaffl, M.W. (2006) Mol. Aspects Med. 27: 126–139. MACS Product or Services* Order no. MACSxpress B Cell Isolation Kit, human 130-098-190 MACSxpress Separator 130-098-308 MACSmix Tube Rotator 130-090-753 MACSQuant Analyzer 130-092-197 Genomic services * Products and services are for research use only. MACSxpress Cell Isolation Kits are also available for naive B cells, NK cells, pan T cells, CD4+ T cells, and CD8+ T cells. For further information visit www.macsxpress.com For more information on Miltenyi Biotec's comprehensive genomic and bioinformatic services visit www.macsgenomicservices.com New Effective activation of pDCs and B cells High-quality oligonucleotides for TLR9 stimulation DNA oligonucleotides (ODNs) containing the CpG motif represent specific toll-like receptor 9 (TLR9) ligands, enabling studies on the role of pDCs and B cells in innate immunity and inflammation. Miltenyi Biotec offers four different classes of CpG ODNs of outstanding quality for best possible activation of your specific cell type. • High reproducibility: activity tested for each batch • Ultrapure, endotoxin-free • Fully compatible with MACS® Cell Separation Products • Easy to handle: reconstitution protocol included • Unique ODNs for superior cell activation miltenyibiotec.com www.miltenyibiotec.com Vol 15 • 1/2013 MACS & more 13 Report Isolation of monocytes with high purity directly from whole blood for transcriptome analysis in translational research Christelle Foucher1, Sébastien Vachenc1, Alexandre Meniccaci1, Bernhard Gerstmayer2, Gwenola Henrion1, Uwe Janssen2, Darren Wilbraham3, Karine Le Malicot1, and Jean-Claude Ansquer1 Laboratoires Fournier SA, formely an Abbott Company, Daix, France Miltenyi Biotec GmbH, Bergisch Gladbach, Germany 3 Quintiles Limited, London, UK 1 2 Introduction Fenofibrate is a lipid-lowering drug used in the treatment of dyslipidemia. Fenofibrate effects have been attributed to the activation of the nuclear transcription factor peroxisome proliferator–activated receptor-α (PPARα). PPARα plays a role in the regulation of tissue factor expression in human monocytes and might thus influence atherothrombosis¹,². In this study, we assessed the effects of fenofibrate on gene expression in peripheral blood monocytes of healthy donors. Microarray-based transcriptome analysis is a powerful tool in translational research for evaluating drug effects on particular blood cell types. However, for the reliable detection of subtle changes in gene expression in a certain cell type, it is crucial to use isolated cell populations of high purity for analysis. In particular for translational research projects involving multiple clinical centers and operators, it is vital to use cell isolation protocols that are short, simple, and highly reproducible, and avoid steps that are prone to variability, such as the preparation of peripheral blood mononuclear cells (PBMCs). Positive selection of CD14+ monocytes by MACS® Technology is a well-established and reliable procedure. Here we used the autoMACS® Pro Separator and Whole Blood CD14 MicroBeads to magnetically isolate monocytes directly from whole blood and achieved high cell purities and yields. This protocol avoids both PBMC preparation and erythrocyte lysis, which are 14 MACS & more Vol 15 • 1/2013 both laborious and can lead to variation in cell separation results. Microarray experiments and comparison of gene expression at three different time points of fenofibrate treatment allowed for the identification of differentially expressed sequences (DES) and modulated biological functions. The experiment workflow is summarized in figure 1. Subjects, materials, and methods Subjects and study design Twenty six healthy males or post menopausal (natural or chirurgical) females not receiving hormone replacement therapy (HRT) or having stopped HRT for at least 1 month, aged 40–65 years inclusive, were recruited in this openlabel, single-center research study to receive a standard dose of fenofibrate as one 145 mg tablet daily treatment (Lipanthyl®, Laboratoires Whole blood samples from healthy donors Isolation of monocytes with autoMACS Pro Separator and Whole Blood CD14 MicroBeads Microarray analysis of purified CD14+ monocytes Figure 1 Workflow for the isolation of CD14+ monocytes directly from whole blood and subsequent transcriptome analysis. Fournier SA, Dijon, France). Subjects with a body mass index (BMI) ≥30 kg/m2 or <18 kg/ m2 or with known hypersensitivity to fibrates, or females with child bearing potential without a reliable method of contraception, having received an investigational drug in the last 90 days before date of inclusion were not included in the study. All subjects had normal folate levels (mean±sd: 15.2±11.1 ng/mL) and vitamin B12 levels (404.1±165.2 pg/mL) at inclusion in the study. The study included a screening phase from a few days up to 3 weeks (wks) and a treatment phase of 6 wks. Blood was drawn and monocytes were separated at baseline, after 7 to 10 days, and after 6 wks of treatment. Ethic approval was obtained from the Guy’s Hospital Research Ethics Committee, London, UK. Freely given informed consent was obtained from each subject before enrollment. Isolation of monocytes from whole blood Freshly drawn whole blood (40 mL) was anticoagulated using EDTA. Two aliquots (15 mL each) were magnetically labeled with Whole Blood CD14 MicroBeads. Labeled CD14+ monocytes were automatically isolated in two runs using the autoMACS Pro Separator according to the manufacturer’s protocol. Isolated monocytes from both runs were combined and analyzed by flow cytometry to determine viability, yield, and purity. For subsequent RNA extraction, isolated cells were centrifuged and flash-frozen. www.miltenyibiotec.com Report Statistical analysis A global effect of the treatment on the 78 (26×3) intensity profiles was determined using a 2-way ANOVA considering donors and times of sample collection, adjusted by using the Benjamini-Hochberg false-discovery rate (FDR) method to adjust p values and control for the first species error. Pairwise comparisons of the DES between study visits were performed using the Student-Newman-Keuls (NK) test. A significant effect of the treatment on the sequences was concluded for p ≤ 0.01. For functional analysis, pathways and networks were constructed based on the classification of all the DES modulated in at least one pairwise comparison (p ≤ 0.01 for NK test) via a k-means clustering approach (user-defined number of clusters = 11, cosine correlation and centroid-based search). Functional networks were constructed using the Ingenuity® Pathway Analysis software (IPA version 8.6 build 93815). Results and discussion Magnetic isolation of monocytes directly from whole blood CD14+ monocytes were enriched directly from whole blood in an automated fashion using the autoMACS Pro Separator and Whole Blood CD14 MicroBeads. In the example shown in figure 2 the frequency of monocytes in the whole blood sample amounted to ≈6%. MACS www.miltenyibiotec.com treatment. We identified 5,187 sequences that were differentially modulated in at least one of the pairwise comparisons. The distribution was as follows: 3,924 DES between 0 and 1 wk, 1,973 DES between 0 and 6 wks, and 2,904 DES between 1 and 6 wks of fenofibrate treatment (fig. 3). Quality and yield of RNA extracted from isolated monocytes The yield of monocytes magnetically isolated from 30 mL of whole blood was high, which allowed us to extract large amounts of RNA for microarray analysis. The yield of RNA extracted from isolated monocytes (n=78) amounted to 2.15±0.73 µg (mean±sd). RIN values reached 9.57±0.47 (mean±sd) indicating consistently high RNA quality for sensitive, reliable microarray experiments. K-means clustering led to the identification of 11 clusters showing different trends over time in gene expression after fenofibrate treatment. One of the k-means clusters, which included 476 DES, showed a trend to down-regulation after 1 wk and a trend to up-regulation between 1 and 6 wks of treatment. Out of these 476 DES, 324 had mapped gene identities, 231 were eligible for networks, and 220 were eligible for function pathway analysis around immunological disease, cell-mediated immune response, cellular assembly and organization, cellular movement, antigen presentation, cardiovascular disease, cellular growth and proliferation, lipid metabolism, molecular transport, inflammatory response etc. (fig. 4). Microarray analysis of monocytes isolated with MACS® Technology We compared gene expression in monocytes isolated from peripheral blood of healthy donors at 0, 1, and 6 wks of fenofibrate Before enrichment After enrichment 6.15% 97.6% CD14-PE RNA extraction and microarray analysis Total RNA was extracted from flash-frozen cell samples using the NucleoSpin® RNA II system (Macherey-Nagel). RNA was quantitated and RIN values were assessed using the Agilent 2100 Bioanalyzer platform and the integrated software. RNA was amplified and labeled with Cy™3 using the Agilent Low Input Quick Amp Labeling Kit (Agilent Technologies). RNA was hybridized to Agilent Whole Human Genome Oligo Microarrays (4×44K). Technology allowed us to separate monocytes to purities greater than 97% (fig. 2, dot plots). The mean purity of monocytes in 78 samples from 26 donors amounted to 94.1±6.17%. The mean cell yield was 1.3×106±0.55×106. Purified monocytes showed consistently high viabilities of ≈96%. For details see the table in figure 2. CD14-PE Flow cytometry Cells were labeled with CD14-PE and CD45FITC antibodies before and after separation, and analyzed by flow cytometry. CD15 antibodies were used to evaluate the frequency of granulocytes. All antibodies were obtained from Miltenyi Biotec. Cell debris and dead cells were excluded from the analysis based on scatter signals and propidium iodide fluorescence. CD45-FITC Parameter CD45-FITC Mean sd Frequency of monocytes in whole blood sample (% among CD45+ cells) 8.1 2.25 Purity of monocytes after enrichment (% among CD45+ cells) 94.1 Yield of enriched cells (number of cells per mL) Viability of enriched cells (% live cells) 6.17 1.3×10 0.55×106 95.7 3.4 6 Figure 2 Isolation of CD14+ monocytes from whole blood using the autoMACS® Pro Separator and Whole Blood CD14 MicroBeads. Cells were enriched as indicated in the subjects, materials, and methods section. Before and after enrichment, cells were labeled with CD14-PE and CD45-FITC and analyzed by flow cytometry. Vol 15 • 1/2013 MACS & more 15 Report Best-in-class flow cytometry The MACSQuant® Family of flow cytometers Powerful and compact 3 lasers and 10 optical parameters Discover new answers Powerful four-laser functionality in a compact three-laser layout Achieve more Automated labeling and analysis of up to 96 samples in a single run Real-time remote support At just the touch of a button Search deeper Enhanced rare cell analysis with proven MACS® Technology 16 MACS & more Vol 15 • 1/2013 macsquant.com www.miltenyibiotec.com Report Conclusion • The autoMACS Pro Separator in combination with Whole Blood CD14 MicroBeads allows for rapid and robust magnetic isolation of monocytes with high yields. • Isolated CD14+ monocytes showed purities of 94% on average. • The use of isolated monocytes enables sensitive and accurate microarray-based transcriptome analysis of research samples. • Significant short-term (1 wk) and middleterm (6 wks) effects of fenofibrate on gene expression in monocytes were observed. • Identification of a large number of DES within a k-means cluster allowed for the construction of functional networks with eligible gene identities involved in particular in metabolic and inflammatory pathways. 1070 240 973 203 1678 460 563 0 wks vs. 1 wk (3,924 DES) 0 wks vs. 6 wks (1,973 DES) References 1. Marx, N. et al. (2001) Circulation 103: 213–219. 2. Neve, B.P. et al. (2001) Circulation 103: 207–212. 1 wk vs. 6 wks (2,904 DES) Figure 3 Venn diagram for comparisons of DES at three time points of fenofibrate treatment. The Student-Newman-Keuls algorithm was applied for all pairwise comparisons. For details see the subjects, materials, and methods section. 0 vs. 1 wk 0 vs. 6 wks 1 vs. 6 wks Figure 4 Functional networks constructed from a k-means cluster. Network-eligible genes from a cluster showing a trend to down-regulation after 1 wk and a trend to up-regulation between 1 and 6 wks of fenofibrate treatment were used as “seeds” for in silico network generation. Down-regulation is indicated in green and up-regulation in red. For details see the subjects, materials, and methods section. MACS Product or Services* Order no. autoMACS Pro Separator – Starter Kit 130-092-545 Whole Blood CD14 MicroBeads, human CD14, CD15, and CD45 antibodies Genomic services 130-090-879 Visit www.macsantibodies.com Visit www.macsgenomicservices.com *Products and services are for research use only. www.miltenyibiotec.com Vol 15 • 1/2013 MACS & more 17 REPORT Report An automated method for purification of CD138+ cells from whole bone marrow samples for multiple myeloma research Hossain Mossafa and Sabine Defasque Laboratoire Cerba, Département Génétique Cergy Pontoise, 95310 Saint Ouen L’Aumone, France Introduction and reliable automated isolation of CD138+ CD138 MicroBeads and the autoMACS Pro Multiple myeloma (MM), the second most PCs from whole BM samples for MM research. Separator amounted to 95% in average (table common hematological malignancy, is a 1). For the vast majority of MM samples (95%) plasma cell (PC) disorder in the bone marrow Materials and methods we obtained enough cells for the performance (BM). MM is characterized by a large clinical Isolation of CD138+ cells of the recommended panel of FISH analyses heterogeneity despite the homogeneous For the isolation of CD138 + cells directly and genome-wide analysis. morphological appearance of malignant PCs. from whole BM samples (1.5 to 3 mL), cells Chromosomal aberrations are a hallmark were magnetically labeled with Whole Blood FISH analysis of CD138+ cells of MM, and distinct genetic abnormalities CD138 MicroBeads (Miltenyi Biotec). Program CD138+ cell enrichment prior to FISH analysis characterize the major subtypes of the disease. “posselwb” in combination with the “Clean” more than doubled the detection rate of As an addition to interphase fluorescence in process was used for separation of CD138+ abnormalities (83% vs. 40% in unseparated situ hybridization (FISH), the more global cells on the autoMACS Pro Separator (Miltenyi cells), and frequencies of abnormalities reached assessment of the underlying cytogenetics by a Biotec) according to the manufacturer’s significant levels. Figure 1 shows examples genome-wide analysis of malignant PCs, using protocol. Purities of isolated cell populations of FISH analyses of isolated CD138+ cells, high-density, single-nucleotide polymorphism were determined by flow cytometry using comparing normal cells (left) with malignant (SNP) arrays for molecular karyotyping, has CD138 and CD38 antibodies. The purity cells (right). The normal cell in figure 1A significantly improved the detection and of DNA was analyzed using a NanoDrop™ Sample Detectable PCs CD138 + PCs Instrument (Thermo Fisher Scientific). identification of genetic lesions. in bone marrow following FISH and/or molecular karyotyping samples (%) isolation (%) experiments with unseparated BM samples FISH analysis 1 2 86.3 have a 30 to 50% probability of showing false After separation CD138+ PCs were hybridized 2 1 88.9 results or failure due to technical reasons. This with the LSI D13S25 (13q14.3) Single Color 3 0 91.8 is especially true for samples from BM aspirates and/or the LSI IGH/FGFR3 Dual Color, Dual 4 5 93.0 that were affected by very low PC infiltration in Fusion Translocation Probe (t(4;14)(p16;q32)), 5 5 93.5 and/or the LSI P53 (17p13.1) Single Color the BM. Purified CD138+ cells are a prerequisite to Probe and analyzed by fluorescence microscopy. 6 16 93.7 increasing the sensitivity of FISH analysis or 7 11 95.5 SNP arrays. The quality of FISH and molecular Results 8 24 95.5 karyotyping results depends on the degree of Isolation of CD138+ cells directly from BM 9 25 97.3 samples PC purity and DNA integrity after isolation. 10 30 97.5 Given the daily demands of laboratories there In a study of 100 MM samples from whole BM, is a need for an automated platform for the we evaluated the efficiency and performance of Table 1 Frequency of CD138+ PCs prior to and preparation of pure CD138+ cell populations. separation, cell purity, and the quality of DNA after enrichment from BM samples using Whole Blood CD138 MicroBeads and the autoMACS Here we used Whole Blood CD138 MicroBeads after purification of CD138+ cells. Purities of Pro Separator. PC purity was determined by flow and the autoMACS® Pro Separator for the fast CD138+ PCs after isolation with Whole Blood cytometry using CD138 and CD38 antibodies. 18 MACS & more Vol 15 • 1/2013 www.miltenyibiotec.com Report shows two orange signals representing the two alleles of the D13S319 locus. The malignant cell shows only one orange signal, due to a deletion affecting locus D13S319 or monosomy of chromosome 13. The normal cell in figure 1B shows two orange (FGFR3) and two green (IgH) signals. The malignant cell (fig. 1B, right) shows an abnormal signal pattern with one orange (FGFR), one green (IGH), and three fusion signals, resulting from the chromosomal translocation (t(4;14) FGFR3/IgH). NanoDrop™ Analysis of DNA extracted from isolated CD138+ PCs revealed high purity (data not shown). Conclusion As a routine MM research laboratory, we receive numerous BM samples every day. Isolation of CD138+ cells from these samples is necessary to increase the sensitivity of downstream assays, such as FISH analysis or molecular karyotyping by SNP arrays. Since 2007, we have performed more than 6,000 PC isolations. This large number necessitates a reliable, rapid, and standardized method, A B allowing us to isolate CD138+ cells from multiple samples in a convenient way, while maintaining sample integrity. Whole Blood CD138 MicroBeads in combination with the autoMACS Pro Separator meet all of our lab’s requirements. The autoMACS Pro Separator allows the standardization of cell separation processes and ensures a rapid handling of MM samples. • Whole Blood CD138 MicroBeads enable fast isolation of CD138+ cells directly from BM samples, thus minimizing hands-on time and maximizing the yield of target cells. • No sample preparation is required, such as density gradient centrifugation or red blood cell lysis. • Purified CD138+ cells can be immediately subjected to FISH or molecular analyses. • The detection rate of chromosomal abnormalities per sample in MM and PC dyscrasia significantly improves when analysis is performed on purified populations of CD138+ PCs. • The platform allows the generation of reproducible and consistent results – even in multi-user settings. CD138+ plasma cells The trusted resource for your cell research Miltenyi Biotec product catalog 2013/2014 Hot off the press, our new catalog features more products than ever before. del(13): locus D13S319 B Get a comprehensive overview of our entire portfolio of products and services. From broad background information to details on specific products, you will easily find the information you need. Myeloma: t(4;14) FGFR3/ lgH Figure 1 FISH analysis of CD138+ cells. PCs were isolated from whole BM using Whole Blood CD138 MicroBeads. Isolated cells were subjected to FISH analysis with (A) LSI D13S25 Single Color Probe, or (B) LSI IGH/FGFR3 Dual Color, Dual Fusion Translocation Probe. In both pictures a normal cell is shown on the left and a malignant, mutated cell on the right. www.miltenyibiotec.com MACS Product* Order no. autoMACS Pro Separator – Starter Kit 130-092-545 Whole Blood CD138 MicroBeads 130-093-062 CD138-PE 130-081-301 CD38-APC 130-092-261 CD19-FITC 130-091-328 Order your copy today! miltenyibiotec.com/catalog2013 * Products are for research use only. Vol 15 • 1/2013 MACS & more 19 Report Highly purified peripheral blood γ/δ T cells isolated by MACS® Technology respond to NOD2 ligand Lothar Marischen, Hans-Heinrich Oberg, Christian Peters, Sandra Ussat, Hoa Ly, Dieter Kabelitz, and Daniela Wesch Institute of Immunology, University of Kiel, Kiel, Germany Introduction (NOD) 2 was expressed in freshly isolated γ/δ Materials and methods CD3 +γ/δ T cells display characteristics T cells⁸. Cell isolation of the adaptive and the innate immune Our studies revealed that highly purified γ/δ Human γ/δ T cells were depleted from system¹. The dominant subset of γ/δ T cells express NOD2 mRNA and NOD2 PBMCs using the Anti-TCRγ/δ MicroBead T cells expresses a Vγ9Vδ2 T cell receptor protein⁹. Furthermore, we investigated a Kit (Miltenyi Biotec). For depletion of human (TCR), which recognizes phosphorylated possible function of NOD2 in freshly isolated CD14 + monocytes, CD14 MicroBeads intermediates of the bacterial non-mevalonate γ/δ T cells by stimulating the cells with the (Miltenyi Biotec) were used. Cell separation isoprenoid biosynthesis pathway. Synthetic minimally bioactive motif muramyl dipeptide was performed using LS Columns (Miltenyi Biotec). After depletion, the proportion of phosphoantigens such as bromohydrin (MDP) that mimics bacterial peptidoglycan. residual γ/δ T cells or monocytes was <0.1%. pyrophosphate (BrHPP) are capable of inducing large-scale Vγ9Vδ2 T cell expansion, which is independent of processing and presentation of such molecules by classical cross-linked TCR MHC molecules¹,². After TCR stimulation, γ/δ T cells rapidly release cytokines, such as IFN-γ Cytokine medium medium MDP-LD MDP-DD and MIP-1α (CCL3), thereby activating other cells of the immune system³. Additionally, γ/δ IL-1β T cells possess features of innate immune cells, such as antigen-presenting capacity and express pattern recognition receptors (PRR), including GRO Toll-like receptors (TLR)⁴,⁵. TLR recognize a broad variety of structurally conserved molecules derived from microbes. TLR control (-) (+) ligands have been shown to costimulate TCRactivated γ/δ T cells by enhancing production of cytokines and chemokines⁶,⁷. Besides TLR, another class of PRR, the nucleotide-binding leucine-rich repeat receptors (NLR), was Figure 1 Production of IL-1β and GRO in response to TCR cross-linking and MDP-LD. γ/δ T cells were purified by positive selection with MACS Technology. 4×10⁶ cells per well (24-well plate) were cultured in detected in γ/δ T cell lines. However, these the absence or presence of rabbit anti-mouse Ig (cross-linked TCR) and MDP-LD or MDP-DD as indicated. studies did not address whether the NLR Culture supernatants were analyzed for cytokines after 24 h. Positive and negative controls were included in nucleotide-binding oligomerization domain the array. 20 MACS & more Vol 15 • 1/2013 www.miltenyibiotec.com Report To enrich γ/δ T cells or monocytes from PBMCs, the Anti-TCRγ/δ MicroBead Kit or CD14 MicroBeads were used. PBMCs were pre-treated with FcR Blocking Reagent (Miltenyi Biotec) to avoid non-specific binding of antibodies (Abs) to FcR-bearing cells. The purity of the positively selected A cells ranged between 83 and 97% when only one LS Column was used for positive selection. This pre-enrichment of γ/δ T cells by MACS® Technology was necessary to avoid time-consuming flow sorting of PBMCs. To definitely ensure the depletion of residual monocytes in the enriched γ/δ T cell fraction B Before depletion After depletion of monocytes SSC After depletion of γ/δ T cells SSC Before depletion FSC 0% 78.41 % no stain CD3 2.14 % FSC 0% γ/δ C CD14 D 200 4000 IFN-γ (pg/mL) MIP-1α (pg/mL) 5000 3000 2000 1000 0 incl. γ/δ w/o γ/δ 100 50 0 w/o γ/δ & CD14 medium 150 MDP-LD incl. γ/δ w/o γ/δ w/o γ/δ & CD14 MDP-DD Figure 2 MIP-1α and IFN-γ production by PBMCs depleted or not of γ/δ T cells and monocytes. (A, B) Gates were set on lymphocytes (A, upper dot plots) or monocytes (B, upper dot plots) to determine γ/δ T cells or monocytes among PBMCs, respectively, before and after depletion of the appropriate cell population. The frequencies of CD3+TCRγ/δ+ T cells (A, lower dot plots) or CD14+ monocytes (B, lower dot plots) among PBMCs of one representative donor before and after depletion of γ/δ T cells or monocytes, respectively, are shown. (C, D) Undepleted PBMCs (incl. γ/δ), PBMCs depleted of γ/δ T cells (w/o γ/δ), and PBMCs depleted of both γ/δ T cells and monocytes (w/o γ/δ & CD14) were stimulated with BrHPP and rIL-2 in the absence (medium) or presence of active MDP-LD or inactive MDP-DD as indicated. 1.5×10⁵ cells per well (96-well plates) were used throughout the experiment. Concentrations of MIP-1α (C) and IFN-γ (D) in the supernatants were determined by ELISA after 24 h. Results of fig. 2D were reproduced from Marischen et al. (ref. 9) with the permission of John Wiley and Sons. Results of one representative experiment out of four are shown in figure 2 C and D. www.miltenyibiotec.com and vice versa, a further purification step was done by sorting with a FACSAria® cell sorter (BD® Biosciences) or by using another LS Column. The purity of the cells was then >99%. For further details, please refer to Marischen et al.⁹. Activation of cells PBMCs and γ/δ T cell- or monocyte-depleted PBMCs were stimulated with the γ/δ T cell– specific antigen BrHPP (200 nM, Innate Pharma®) in the presence of rIL-2 (Novartis). Positively selected γ/δ T cells or monocytes were cultured in uncoated wells or wells coated with 1 µg/mL rabbit anti-mouse Ig, which binds to anti-TCRγ/δ mAb present on the γ/δ T cells or CD14 mAb present on monocytes after labeling with MACS MicroBeads. Additionally, all cell cultures were incubated with 10 µg/mL MDP-LD isomer (tlrl-mdp, Invivogen®) or as a control with inactive MDP-DD isomer (tlrlmdpc; Invivogen) for 24 h without rIL-2 in serum-free X-VIVO™15 medium (Lonza®). For detailed culture conditions see reference 9. Cytokine analysis Cytokines were analyzed in cell culture supernatants by using the RayBio® Human Cytokine Antibody Array VI & 6.1 Map and VII & 7.1 Map (Hoelzel Diagnostic), which allows simultaneous detection of 2×60 cytokines and chemokines. Signals were detected by chemiluminescence, followed by semiquantitative analysis with the AIDA software (Raytest). To determine the intensity, local background was subtracted from each value and normalized against the positive controls of each membrane. IFN-γ and MIP1α were detected by DuoSet® sandwich ELISA (R&D Systems) according to the manufacturer’s instructions. Flow cytometry To determine the proportion of γ/δ T cells among PBMCs, cells were labeled with antiCD3 mAb and anti-TCRγ/δ mAb. Monocytes among PBMCs were analyzed after staining with anti-CD14 mAb. Antibodies were obtained from BD Biosciences. Vol 15 • 1/2013 MACS & more 21 Report 83.1 % no stain B no stain A 99.9 % 89.1 % 99.7 % γ/δ C CD14 D 600 IFN-γ (pg/mL) MIP-1α (pg/mL) 4500 3000 1500 0 γ/δ 400 200 0 monocytes medium MDP-LD γ/δ monocytes MDP-DD Figure 3 Effects of MDP-LD on highly purified monocytes and γ/δ T cells. (A, B) The purities of γ/δ T cells (A) or CD14+ monocytes (B) were determined after MACS Separation with one LS Column (A and B, left dot plots) and after subsequent flow sorting (A and B, right dot plots), shown for one representative donor. (C, D) Highly purified γ/δ T cells (1.5×10⁵) were stimulated through the TCR via immobilized rabbit antimouse Ab in the presence or absence of MDP-LD or MDP-DD, whereas monocytes (1.5×10⁵) were cultured in medium or activated by MDP-LD or MDP-DD as indicated. Concentrations of MIP-1α (C) and IFN-γ (D) in the supernatants were analyzed by ELISA after 24 h. Results of figure 3D were reproduced from Marischen et al. (ref. 9) with the permission of John Wiley and Sons. Results and discussion MDP enhanced cytokine secretion in purified γ/δ T cells γ/δ T cells were isolated from PBMCs from three healthy donors by positive selection using an LS Column. The purity of the cells was between 83 and 97%. Purified γ/δ T cells were cultured in medium or stimulated by TCR cross-linking (via rabbit anti-mouse Ig) in the absence or presence of MDP-LD or MDP-DD for 24 h. IL-1β and GRO production were measured by a human cytokine Ab array. Figure 1 shows that MDP-LD induced secretion of IL-1β and GRO by the purified TCR-stimulated γ/δ T cells, whereas MDP-DD had no effect. However, IL-1β and GRO are produced mainly by monocytes, and not by γ/δ T cells. This suggests that residual monocytes were present in the γ/δ T cell population, 22 MACS & more Vol 15 • 1/2013 which could be responsible for production of these cytokines. Similar to our results, Lancioni and colleagues observed that CD4+ T cells with a purity of 97% differ from highly purified CD4+ T cells with regard to their responses to LPS.¹⁰ Therefore, we examined in more detail γ/δ T cell– or monocyte-depleted PBMCs and highly purified, freshly isolated γ/δ T cells or monocytes. Abrogation of TCR/MDP-LP–induced IFN-γ production after depletion of γ/δ T cells from PBMCs PBMCs were completely depleted of γ/δ T cells (fig. 2A) or monocytes (fig. 2B) by MACS Technology. Undepleted PBMCs or PBMCs depleted of γ/δ T cells or PBMCs depleted of both γ/δ T cells and monocytes were stimulated with BrHPP in the absence or presence of MDP-LD or MDP-DD for 24 h (fig. 2C, D). In these experiments, we analyzed the cytokine MIP-1α, which can be secreted by both γ/δ T cells and monocytes, and IFN-γ, which is exclusively produced by T cells. We observed that MDP-LP, but not inactive MDP-DD, enhanced MIP-1α production in undepleted PBMCs, but also in PBMCs depleted of γ/δ T cells. The depletion of monocytes almost abolished the secretion of MIP-1α suggesting that MDP-LP–reactive monocytes were the major producers of MIP-1α. Moreover, MDPLD, but not MDP-DD, enhanced IFN-γ secretion in BrHPP-stimulated PBMCs, which was abrogated after γ/δ T cell depletion (fig. 2D). These experiments indicate a moderate direct costimulatory effect of MDP-LD on γ/δ T cells, which was investigated in further experiments using highly purified γ/δ T cells from 18 healthy donors (see ref. 9). MDP-LD directly increases IFN-γ production in highly purified γ/δ T cells From the same PBMCs shown in figure 2 as well as from 3 additional healthy donors (see ref. 9), γ/δ T cells and CD14+ monocytes were isolated by a combination of MACS Separation and flow sorting or by two consecutive MACS Separations. We obtained highly purified cells from both separation procedures. The data for cells purified by the combination of MACS Separation and flow sorting from one representative donor are shown in figure 3A and B. Highly purified monocytes stimulated with MDP-LD produced higher levels of MIP1α than the control or cells incubated with inactive MDP-DD (fig. 3C). Freshly isolated, highly purified γ/δ T cells from the same donor secreted IFN-γ in response to TCR crosslinking. IFN-γ secretion was slightly enhanced in the presence of MDP-LD, but not with MDPDD (fig. 3D). Purified monocytes did not produce IFN-γ under these culture conditions (fig. 3D). Similar results were obtained after two consecutive MACS Separations as shown in figure 6 of reference 9. Conclusion • MACS Separation followed by flow sorting as well as two consecutive MACS Separations permit the isolation of highly purified γ/δ T cells or CD14+ monocytes from PBMCs. • The highly purified cell populations allow functional studies on innate receptors, such www.miltenyibiotec.com Report as NOD2, expressed by freshly isolated γ/δ T cells. • In order to obtain PBMCs devoid of γ/δ T cells and CD14+ monocytes, these cells were completely removed by MACS Separation. • The biologically active MDP-LD isomer, but not the inactive MDP-DD isomer, enhanced IFN-γ production by TCR-stimulated, freshly isolated, highly purified γ/δ T cells, further underscoring a role of γ/δ T cells in anti-bacterial immunity. Acknowledgment We thank John Wiley and Sons for the kind permission to reproduce figures from Marischen et al. (ref. 9). References 1. Hayday, A.C. (2000) Annu. Rev. Immunol. 18: 975–1026. 2. Espinosa, E. et al. (2001) J. Biol. Chem. 276: 18337–18344. 3. Wesch, D. et al. (2005) Curr. Med. Chem. – AntiInflammatory & Anti-Allergy Agents 4: 153–160. 4. Brandes, M. et al. (2005) Science 309: 264–268. 5. Wesch, D. et al. (2006) J. Immunol. 176: 1348– 1354. 6. Pietschmann, K. et al. (2009) Scand. J. Immunol. 70: 245–255. 7. Wesch, D. et al. (2011) Cell. Mol. Life Sci. 68: 2357–2370. 8. Hedges, J.F. et al. (2005) J. Immunol. 174: 6045– 6053. 9. Marischen, L. et al. (2011) Scand. J. Immunol. 74: 126–134. 10.Lancioni, C.L. et al. (2009) J. Immunol. Methods 344: 15–25. MACS Product* Order no. Anti-TCRγ/δ MicroBead Kit 130-050-701 CD14 MicroBeads 130-050-201 FcR Blocking Reagent, human 130-059-901 LS Column 130-042-401 Pre-Separation Filter 130-041-407 * Products are for research use only. Dissociate and discover gentleMACS™ Dissociators Get a good start with automated tissue dissociation Flexible High yields of viable single cells from virtually any tissue, including tumors, lung, spleen, and intestine Time-saving Run up to eight programs in parallel or independently Reproducible Standardized tissue dissociation and homogenization using optimized procedures Safe Closed system, sterile sample handling Walk-away processing Automated heaters enable enzymatic dissociation at 37 °C gentlemacs.com www.miltenyibiotec.com Vol 15 • 1/2013 MACS & more 23 Report Efficient and rapid in vitro generation of fully functional multi-virus-specific CD4+ and CD8+ T cells Anna Foerster-Marniok, Verena Traska, Olaf Brauns, Sven Kramer, Jürgen Schmitz, Mario Assenmacher, and Anne Richter Miltenyi Biotec GmbH, Bergisch Gladbach, Germany Introduction Materials and methods Antigen-specific T cells play a critical role in the regulation of immune responses and the elimination of virus-infected or malignant cells in the human body. T cells are essential, e.g., for the control of the outgrowth of EpsteinBarr virus (EBV)-infected B cells. CD4+ and CD8+ T cells specific for the EBV antigens BZLF1¹-⁴ and EBNA-1⁵-¹¹ have been found in EBV-infected individuals. Virus-specific T cells also hold great potential for clinical use. The adoptive transfer of clinical-grade CD4+ and CD8+ T cells specific for adenovirus (AdV) hexon, cytomegalovirus (CMV) pp65, and EBV antigens is a valuable tool for the treatment of AdV¹², CMV¹³-¹⁶, and EBV¹⁷,¹⁸ infections after hematopoietic stem cell transplantation. To further enhance research on virus-specific T cells, we have established a protocol for the efficient and rapid generation of EBV-, AdV-, and CMV-specific (tri-virus-specific) T cells. The virus-specific CD4+ and CD8+ T cells were stimulated in vitro using peptide pools, and subsequently magnetically enriched according to their IFN-γ secretion. The tri-virus-specific T cell population could be easily expanded without major alterations in the proportions of the respective specificities. Generation of multi-virus-specific T cells For the generation of multi-virus-specific T cells we stimulated 10⁹ PBMCs from leukapheresis products of several healthy donors with a combination of four PepTivator® Peptide Pools (Miltenyi Biotec) covering CMV pp65 or IE-1, AdV hexon, or EBV EBNA-1 or BZLF-1 for four hours. The simultaneous addition of four peptide pools to a single Generation of multi-virus-specific T cells PBMCs Mixed antigen loading Separate antigen loading PBMCs PBMCs Stimulation with a mix of antigens 1+2+3+4 1/4 Loading antigen 1 1/4 Loading antigen 2 1/4 Loading antigen 3 1/4 Loading antigen 4 Stimulation Enrichment of IFN‑γ– secreting T cells Enrichment of IFN-γ–secreting T cells T cell expansion T cell expansion Analysis for specificities Intracellular cytokine staining after in vitro restimulation with a mixture and individual peptide pools Figure 1 Experimental procedure for the generation of multi-virus-specific T cells. For details see the materials and methods section. 24 MACS & more Vol 15 • 1/2013 www.miltenyibiotec.com Report 1.4×10⁶ 0.42 %* 98.6 %* Before enrichment After enrichment 0.46 %* CD4 98.4 %* 1.45 %* 1.80 %* 99.5 %* CD8 CD8 99.8 %* 1.0×10⁶ 1×10⁷ LPLP 3/13/1 mix mix LPLP 3/13/1 separate separate Number of enriched IFN-γ+ T cells per 10⁹ lymphocytes After enrichment Separate antigen loading Number of IFN-γ+ T cells out of 10⁹ lymphocytes Before enrichment B 1.2×10⁶ Mixed antigen loading CD4 A LPLP 19/2 mix 19/2 8.0×10⁵ mix LPLP 19/2 separate 19/2 separate LPLP 6/26/2 mix 6.0×10⁵ mix LPLP 6/26/2 separate separate LPLP 11/2 mix mix 11/2 LPLP 11/2 separate 11/2 separate 1×10⁶ 4.0×10⁵ 2.0×10⁵ 1×10⁵ 1.0×10³ CD8+ T cells CD4+ T cells 1×10⁴ CD4+ T cells secreted IFN-γ secreted IFN-γ * among CD4+/CD8+ T cells CD8+ T cells Figure 2 Enrichment of multi-virus-specific T cells after stimulation with individual peptide pools or a combination thereof. PBMCs from four different donors were stimulated in two different ways as described in the materials and methods section: i) Cells were stimulated with a combination of pp65, IE-1, hexon, and BZLF1 peptide pools in a single batch (mixed antigen loading), or ii) cells were loaded with the individual peptide pools in four aliquots, and aliquots were subsequently combined for further stimulation (separate antigen loading). Subsequently, virus-specific T cells were enriched according to IFN-γ secretion. Before and after enrichment IFN-γ–secreting CD4+ and CD8+ T cells were analyzed by flow cytometry. (A) Results from one representative donor are shown. Numbers indicate frequencies among CD4+ or CD8+ cells. (B) Numbers of IFN-γ–positive CD4+ and CD8+ T cells enriched from PBMCs of four different donors. A select antigen-activated IFN-γ–secreting CD4+ and CD8+ T cells. Purities of enriched cells were determined by flow cytometry using the MACSQuant® Analyzer (Miltenyi Biotec). Enriched multi-virus-specific CD4+ and CD8+ T cells were expanded in the presence of IL‑2 and feeder cells for 9–13 days. A flowchart illustrating the experimental procedure is shown in figure 1. Mixed antigen loading Unstimulated sample Separate antigen loading Stimulated sample 31.39%* 0.04%* B 100 Stimulated sample LP 3/1 mix LP 3/1 separate LP 19/2 mix LP 19/2 separate LP 6/2 mix LP 6/2 separate LP 11/2 mix LP 11/2 separate 90 51.40%* CD4 CD4 0.11%* Unstimulated sample Analysis of PBMCs and multi-virus-specific T cells for antigen specificity For the analysis of antigen specificity and functionality of the enriched, expanded multivirus-specific T cells, we examined the IFN-γ response after short-term in vitro restimulation with individual peptide pools or a mixture thereof. For comparison, we also restimulated PBMCs. The IFN-γ response was determined by intracellular cytokine staining using an 80 % IFN-γ+ T cells sample might decrease the activation efficacy for each peptide pool due to competition of peptides for MHC binding. As a control, we divided the PBMC samples into four aliquots, incubated each aliquot with a single peptide pool for two hours, and recombined the four aliquots for T cell stimulation for another four hours. Afterwards, we used the Large Scale IFN-γ Secretion Assay – Enrichment Kit, human, from Miltenyi Biotec to magnetically 70 60 +_ T cells 50 40 % IFN- 33.99%* 0.08%* CD8 CD8 0.03%* 61.74%* 30 20 10 0 intracellular IFN-γ CD4+ T cells CD8+ T cells * among CD4+/CD8+ T cells Figure 3 Restimulation of enriched and expanded multi-virus-specific T cells. Enriched IFN-γ–secreting cells were expanded for 9 to 13 days. Subsequently, cells were restimulated with a mixture of peptide pools or were left unstimulated. Cells were analyzed for IFN-γ production by intracellular staining and flow cytometry. (A) Results from one representative donor are shown. Numbers indicate frequencies among CD4+ and CD8+ T cells, respectively. (B) Frequencies of IFN-γ–positive CD4+ and CD8+ T cells. Results from four different donors are shown. www.miltenyibiotec.com Vol 15 • 1/2013 MACS & more 25 Report donor 3/1 donor 6/2 donor 19/2 donor 11/2 100 90 80 80 BZLF1 60 EBNA-1 AdV hexon 50 IE-1 pp6540 30 20 10 0 PBMC mix separate PBMC mix separate PBMC mix separate PBMC IE-1 pp65 BZLF1 EBNA-1 AdV hexon IE-1 pp65 mix separate 20 10 PBMC mix separate PBMC mix separate PBMC mix separate PBMC mix separate mix 0 separate mix mix separate pp65 30 separate PBMC PBMC mix mix separate separate PBMC PBMC mix separate mix PBMC separate 0 IE-1 40 PBMC 10 50 mix 20 BZLF1 AdV hexonEBNA-1 AdV hexon separate 30 60 PBMC 40 BZLF1 EBNA-1 mix 50 PBMC 60 donor 11/2 donor 11/2 donor 6/2 donor 6/2 80 separate + 80 90 donor 19/2 donor 19/2 PBMC 80 100 separate 90 donor 3/1 donor 3/1 80 Relative frequency of specific CD4+ T cells (%) donor 11/2 donor 11/2 mix 100 donor 19/2 donor 19/2 + Relative frequency specific T cells (%) Relative frequencyof of specific CD8CD8 T cells (%) donor 3/1 donor 3/1 PBMC + + cells (%) RelativeRelative frequency frequencyof ofspecific specific CD4CD4 T cellsT(%) A B Number of IFNγ+CD4+ T cells 1×10⁸ CMV pp65 CMV pp65 CMV IE-1 CMV IE-1 1×10⁸ 1×10⁷ 1×10⁶ 1×10⁷ 1×10⁶ 1×10⁵ 1×10⁶ 1×10⁵ 1×10⁴ 1×10⁵ 1×10³ 1×10⁴ PBMC Number of IFNγ+CD8+ T cells 1×10⁷ 1×10⁴ PBMC after expansion AdV hexon AdV hexon after expansion 1×10⁶ EBV EBNA-1 EBV EBNA-1 1×10⁵ 1×10⁵ 1×10⁴ 1×10⁴ after expansion PBMC after expansion 1×10⁸ 1×10⁷ 1×10⁷ 1×10⁷ 1×10⁷ 1×10⁷ 1×10⁶ 1×10⁶ 1×10⁶ 1×10⁶ 1×10⁶ 1×10⁵ 1×10⁵ 1×10⁵ 1×10⁵ 1×10⁵ 1×10⁴ 1×10⁴ 1×10⁴ 1×10⁴ 1×10⁴ PBMC after expansion 1×10³ PBMC after expansion 1×10³ PBMC after expansion 1×10³ EBV BZLF1 EBV BZLF1 LP 11/2 mix LP 11/2 separate LP 6/2 mix LP 6/2 separate LP 19/2 mix LP 19/2 separate 1×10³ 1×10³ PBMC 1×10⁶ PBMC after expansion 1×10³ PBMC after expansion PBMC after expansion LP 3/1mix LP 3/1 separate Figure 4 Analysis of individual virus-specific T cell populations. Multi-virus-specific T cells were enriched as indicated in figure 2 and expanded. PBMCs and multi-virus-specific T cell lines were restimulated with individual peptide pools or a mixture thereof. The relative frequencies and absolute cell numbers of T cells with a single antigen specificity were calculated based on total cell numbers and the frequencies of IFN-γ–positive T cells among PBMCs and multi-virus-specific T cells upon restimulation with individual peptide pools. Data from different donors are shown as indicated. Anti-IFN-γ-PE antibody (Miltenyi Biotec). CD4+ and CD8+ cells were then analyzed by flow cytometry using the MACSQuant Analyzer. Based on total cell numbers and the frequencies of IFN-γ–positive T cells among PBMCs and multi-virus-specific T cells upon restimulation with individual peptide pools, we calculated the relative frequencies and absolute cell numbers of T cells with a single antigen specificity. 26 MACS & more Vol 15 • 1/2013 Results and discussion Magnetic enrichment of multi-virusspecific CD4+ and CD8+ T cells Using the Large Scale IFN-γ Secretion Assay – Enrichment Kit, we were able to consistently enrich virus-specific CD4+ and CD8+ T cells to purities higher than 90%. Flow cytometric analyses of IFN-γ–secreting CD4+ and CD8+ T cells in PBMCs before and after magnetic enrichment are shown in figure 2A for one representative donor. Prior to enrichment, cells were stimulated in two different ways: Cells were either stimulated with a combination of pp65, IE-1, hexon, and BZLF1 peptide pools in a single batch, or cells were loaded with the individual peptide pools in four aliquots, and aliquots were subsequently combined for further stimulation. Both stimulation procedures resulted in comparable frequencies of IFN-γ–secreting T cells before enrichment www.miltenyibiotec.com Report (fig. 2A). Likewise, purities of enriched cells (fig. 2A and data not shown) and numbers of enriched cells (fig. 2B) were similar in the respective samples from all tested donors, regardless of whether the samples underwent mixed or separate antigen loading. Specificity and functionality of the enriched and expanded multi-virus-specific T cells Within 9 to 13 days cell populations that were generated by either mixed or separate antigen loading expanded between 25- and 496-fold (data not shown). Both cell lines were restimulated with a mixture of peptide pools and analyzed for intracellular IFN-γ production. The percentage of IFN-γ–reexpressing CD4+ T cells derived from mixed antigen loading and separate antigen loading amounted to 23.8–90.5% and 32.5–84.8%, respectively. Similarly, the percentage of CD8+ T cells amounted to 31.8–88.0% and 34.0– 79.2%, respectively (fig. 3A,B). These results confirm the high specificity and functionality of the T cell lines. T cell expansion rates and frequencies of T cells re-expressing IFN-γ were similar, regardless of whether the cell lines were originally generated by mixed or separate antigen loading (fig. 3B). Individual virus-specific T cell populations show similar enrichment and expansion rates The strategy for the enrichment of virusspecific T cells from PBMCs is based on IFN-γ expression induced by stimulation with the peptide pools. Therefore, differences between stimulation efficacies of individual peptide pools would result in differences in IFN-γ responses of the respective virus-specific T cells, and ultimately in a biased proportion of specificities within the enriched multivirus-specific T cell population. To ensure that the proportions of the different specificities are similar before and after enrichment, we compared the relative frequencies (fig. 4A) and absolute numbers (fig. 4B) of T cells specific for each single antigen in PBMCs and in the T cell lines. The relative frequencies of T cells specific for the individual CMV, EBV, and AdV antigens were about the same in PBMCs and in both T cell lines. This demonstrates that all individual virus-specific T cell populations within PBMCs were effectively stimulated and enriched. Moreover, regardless of whether the www.miltenyibiotec.com original PBMCs were loaded with a mixture of peptide pools or separately with single peptide pools, the obtained T cell lines were comparable with respect to the expansion rate of the individual specificities. Conclusion • A combination of several PepTivator Peptide Pools enables the simultaneous, effective activation of CMV-, EBV-, and AdV-specific (tri-virus-specific) CD4+ and CD8+ T cells. • Activated tri-virus-specific T cells can be co-enriched using the Large Scale IFN-γ Secretion Assay – Enrichment Kit. • Enriched tri-virus-specific T cells can be expanded without significantly altering the proportion of the individual specificities. • Enriched tri-virus-specific T cells are fully functional and re-express IFN-γ upon restimulation. References 1. Bogedain, C. et al. (1995) J. Virol. 69: 4872–4879. 2. Saulquin, X. et al. (2000) Eur. J. Immunol. 30: 2531–2539. 3. Precopio, M.L. et al. (2003) J. Immunol. 170: 2590–2598. 4. Tynan, F.E. et al. (2005) J. Exp. Med. 202: 1249– 1260. 5. Blake, N. et al. (2000) J. Immunol. 165: 7078–7087. 6. Khanna, R. et al. (1995) Virology 214: 633–637. 7. Paludan, C. et al. (2002) J. Immunol. 169: 1593– 1603. 8. Leen, A. et al. (2001) J. Virol. 75: 8649–8659. 9. Voo, K.S. et al. (2004) J. Exp. Med. 199: 459–470. 10.Voo, K.S. et al. (2002) Cancer Res. 62: 7195–7199. 11.Long, H.M. et al. (2005) J. Virol. 79: 4896–4907. 12.Feuchtinger, T. et al. (2006) Br. J. Haematol. 134: 64–76. 13.Feuchtinger, T. et al. (2010) Blood 116: 4360–4367. 14.Einsele, H. et al. (2002) Blood 99: 3916–3922. 15.Mackinnon, S. et al. (2008) Blood Cells Mol. Dis. 40: 63–67. 16.Peggs, K.S. et al. (2011) Clin. Infect. Dis. 52: 49– 57. 17. Moosmann, A. et al. (2010) Blood 115: 2960–2970. 18. Icheva, V. et al. (2013) J. Clin. Oncol. 31: 39–48. MACS Product* PepTivator CMV pp65, human PepTivator CMV IE-1, human PepTivator AdV5 Hexon, human PepTivator EBV EBNA-1, human PepTivator EBV BZLF1, human Order no. For further specificities visit www.peptivator.com Large Scale IFN-γ Secretion Assay – Enrichment Kit, human 130-091-329 IFN-γ Secretion Assay – Cell Enrichment and Detection Kit (PE), human 130-054-201 MACSQuant Analyzer Anti-IFN-γ, CD4, and CD8 antibodies Human IL-2 and other cytokines 130-092-197 Visit www.macsantibodies.com Visit www.macscytokines.com * Products are for research use only. Vol 15 • 1/2013 MACS & more 27 Report Mouse NK cells isolated to high purity by MACS® Technology are fully functional Kathrin Meinhardt1, Irena Kroeger1, Sabine Mueller2, and Evelyn Ullrich1,3,4 1 2 3 4 Department of Internal Medicine 5 – Hematology/Oncology, University of Erlangen, Germany Miltenyi Biotec GmbH, Bergisch Gladbach, Germany Laboratory for Cellular Immunology, Pediatric Hematology & Oncology, J. W. Goethe University, Frankfurt am Main, Germany Center for Cell and Gene Therapy, Frankfurt am Main, Germany Introduction % of NK cells MicroBeads, mouse (Miltenyi Biotec) in NK cells play a crucial role in both innate combination with the autoMACS® Pro and adaptive immunity. Due to their capacity Separator (Miltenyi Biotec) and the program to lyse tumor cells without pre-activation, “PosselD” according to the standard protocol. they hold great potential for use in cellular Untouched NK cells were isolated using therapies¹. To investigate the function of NK the NK Cell Isolation Kit, mouse (Miltenyi cells in detail, it is crucial to work with cell Biotec) and the autoMACS Pro Separator with populations of high purity. In this study, we program “DepleteS”. We further improved the compared two different strategies for NK cell depletion cocktail included in this kit to allow isolation based on MACS® Technology: i) positive selection of NK cells according to the expression of CD49b (DX5) and ii) depletion of non-NK cells. Both approaches yielded NK Spleen cells with high purities from BALB/c mouse 10 spleen. We further optimized the procedure *** 8 for the depletion of non-NK cells, allowing for the isolation of highly pure NK cells also from 6 C57BL/6 mouse spleen. Isolated NK cells were fully functional in terms of IFN-γ secretion 4 and tumor lysis capacity. Materials and methods Sample preparation Spleens from female, 7–9-week-old C57BL/6 and BALB/c mice were dissociated into singlecell suspensions as described². Isolation of NK cells CD49b (DX5)+ NK cells were isolated by positive selection using CD49b (DX5) 28 MACS & more Vol 15 • 1/2013 for a more effective depletion of residual T cells, B cells, and macrophages. This optimized cocktail is now part of the protocol of the new NK Cell Isolation Kit II from Miltenyi Biotec. For NK cell isolation from C57BL/6 spleens, we recommend incubation periods of 10–15 minutes with antibodies and MicroBeads. Purified cell populations were subsequently analyzed by flow cytometry. 15 Blood * 10 2 2 0 BALB/c C57BL/6 0 BALB/c C57BL/6 Figure 1 Frequencies of NK cells in spleen and peripheral blood from two different mouse strains. NK cells from spleens (n=7) and blood (n=4) from BALB/c and C57BL/6 mice were analyzed by flow cytometry with gating on viable CD49b+NKp46+ cells. ***p=0.0006, *p=0.0286. Data were adapted from reference 2. www.miltenyibiotec.com Report Results and discussion NK cell frequencies in spleen and peripheral blood from different mouse strains To gain insight into the overall NK cell content of mouse spleen and peripheral blood from the mouse strains C57BL/6 and BALB/c, we analyzed the frequency of CD3– CD49b+NKp46+ NK cells by flow cytometry. Figure 1 indicates that the percentage of NK cells in both spleen and blood from BALB/c mice was approximately twice as high as from C57BL/6 mice. There were no significant differences in the proportions of CD27+CD11b–, CD27+CD11b+, and CD27–CD11b+ NK cell subsets.² Magnetic isolation of splenic NK cells For detailed characterization of NK cells, in particular functional analysis, it is crucial to use cell separation methods that allow for high cell purities. Here we compared different strategies based on MACS Technology for the isolation of NK cells from BALB/c and C57BL/6 mice. The first strategy involved positive selection of NK cells using CD49b (DX5) MicroBeads, based on the expression of the CD49b antigen. The second approach utilized depletion of non-NK cells using the NK Cell Isolation Kit, mouse, resulting in the isolation of untouched NK cells. Figure 2 shows that both approaches allowed www.miltenyibiotec.com CD49b NK Cell Isolation Kit NK Cell Isolation Kit II 81% +/– 2 90% +/– 3 94.9% +/– 1.3 65% +/– 5 77% +/– 10 89.6% +/– 3.1 BALB/c C57BL/6 NKp46 Figure 2 Isolation of splenic NK cells from BALB/c and C57BL/6 mice using different strategies based on MACS Technology. Cells were isolated as described in the materials and methods section. Subsequently, CD49b (DX5)+NKp46+ cells were analyzed by flow cytometry. Numbers indicate mean purities and standard deviations from at least five independent experiments. Data were adapted from reference 2. for efficient isolation of NK cells from BALB/c mice with purities of up to 90%, whereas cells from C57BL/6 mice reached lower purities of up to 77%. This led us to modify the depletion cocktail to achieve a more effective removal of residual T cells, B cells, and macrophages. Strikingly, the new depletion cocktail, i.e., NK Cell Isolation Kit II, resulted in high-purity NK BALB/c C57BL/6 2000 500 400 1500 IFN-γ (pg/mL) Tumor lysis assay The capacity of isolated NK cells to lyse tumor cells was analyzed by using the crystal violet assay as described previously¹. Briefly, 5,000 tumor cells were plated in 96-well plates and cocultured with isolated NK cells at an effector:target ratio of 10:1. To avoid MHC mismatch effects, we used B16F10 melanoma cells together with NK cells from C57BL/6 mice, and CT26 colon carcinoma cells with NK cells from BALB/c mice. The tumor cells were originally derived from the same background as the corresponding NK cells. CD49b (DX5) MicroBeads IFN-γ (pg/mL) Analysis of cytokine production by isolated NK cells To assess the function of isolated NK cells, we determined their capacity to secrete IFN-γ. To this end, the cells were stimulated overnight with IL-2 (50,000 U/mL). The next day, cell culture supernatants were analyzed using the BD® OptEIA™ Mouse IFN-γ ELISA Set (BD Biosciences). 1000 500 300 200 100 0 0 CD49b (DX5) MicroBeads NK Cell Isolation Kit NK Cell Isolation Kit II Figure 3 IFN-γ production by isolated NK cells. Cells were stimulated with IL-2 (50,000 Units/mL) over night. Cell culture supernatants were analyzed by an IFN-γ–specific ELISA. One representative experiment of at least three independent experiments is shown. Experiments were performed in triplicates. Data were adapted from reference 2. Vol 15 • 1/2013 MACS & more 29 Report BALB/c 80 100 % of specific tumor lysis % of specific tumor lysis 100 C57BL/6 CT26 60 40 20 0 B16F10 80 60 40 20 0 CD49b (DX5) MicroBeads NK Cell Isolation Kit NK Cell Isolation Kit II Figure 4 Tumor lysis assay. For the crystal violet assay, 5,000 tumor cells were plated in 96-well plates and cocultured with isolated NK cells at an effector: target ratio of 10:1. One representative experiment of at least three independent experiments is shown. Experiments were performed in triplicates. Data were adapted from reference 2. cells from both C57BL/6 (approx. 90%) and Conclusion BALB/c spleens (approx. 95%). Importantly, • Both CD49b (DX5) MicroBeads and the NK Cell Isolation Kit allow for the isolation of NK the subset distribution of CD27+CD11b–, CD27 +CD11b +, and CD27 –CD11b + cells cells from BALB/c mouse spleens with high remained unaltered, regardless of whether purity. the cells were isolated by positive selection or • The new NK Cell Isolation Kit II yields depletion (not shown). highly pure NK cells from BALB/c mice and represents the optimal solution for the Functional analysis of isolated NK cells isolation of C57BL/6 NK cells. Next we tested whether the isolated cells • Isolated NK cells are fully functional retained their full functionality, i.e., the regardless of whether they were isolated by capacity to produce cytokines in response to positive selection or depletion. stimulation with IL-2. Our results indicate that both BALB/c and C57BL/6 NK cells from References 1. Terme, M. et al. (2008) Nat. Immunol. 9: 486–494. all three isolation procedures secreted IFN-γ 2. Meinhardt, K. et al. (2012) J. Immunol. Methods (fig. 3). NK cells prepared with the NK Cell 378: 1–10. Isolation Kit II showed slightly reduced IFN-γ production compared to the other approaches. This may be due to the higher NK cell purity in these preparations and thus a lower proportion of contaminating cells that might influence the IFN-γ production. Moreover, we analyzed the isolated NK cells for their capacity to lyse tumor cells. Our results MACS Product* Order no. from the crystal-violet assay show that BALB/c and C57BL/6 NK cells effectively lysed CT26 autoMACS Pro Separator – 130-092-545 Starter Kit colon carcinoma and B16F10 melanoma cells, respectively (fig. 4). CD49b (DX5) MicroBeads, 130-052-501 mouse NK Cell Isolation Kit II, mouse 130-096-892 MACS® Cytokines Consistent immune cell expansion and differentiation Superior quality Up to GMP grade Reliable Standardized high biological activity (IU/mg) Flexible Small, bulk, or customized fillings Time-saving Lot-specific activities available, no revalidation required macscytokines.com MACS GMP Cytokines, MACS GMP Media, and MACS GMP Antigens are for research use and ex vivo cell culture processing only, and are not intended for human in vivo applications. The products are manufactured and tested under a certified ISO 9001 quality system and in compliance with relevant GMP guidelines. They are designed following the recommendations of USP <1043> on ancillary materials. * Products are for research use only. 30 MACS & more Vol 15 • 1/2013 www.miltenyibiotec.com Report Measuring prolyl aminopeptidase activity in extracts prepared from magnetically purified malaria parasites Fabio L. da Silva, Donald L. Gardiner, and Katharine R. Trenholme Department of Biology, Queensland Institute of Medical Research, Brisbane, Australia Introduction Despite extensive eradication campaigns malaria remains a major cause of morbidity and mortality worldwide with an estimated 1–3 million deaths each year¹. The prevention and treatment of this disease is becoming increasingly difficult due to the spread of drugresistant parasites and, therefore, there is an urgent need to discover novel targets for new drug development. The aminopeptidases are a group of enzymes identified within the genome of the most lethal malaria parasite, Plasmodium falciparum, and which may have the potential to become new targets for antimalarial drug development. These enzymes catalyze the cleavage of the N-terminal amino acids from proteins and peptides and one such enzyme, the prolyl aminopeptidase (PfS33PAP) is currently being investigated in our laboratory. As a first step in characterizing the PfS33PAP, it was necessary to identify the enzyme activity in extracts of malaria parasites. However, for biochemical studies it is often crucial to obtain pure preparations of parasite-infected red blood cells (RBCs) that are relatively free of uninfected cells. P. falciparum passes through a series of morphologically distinguishable stages as they mature within RBCs, developing from ring stages into trophozoites and then into schizontstage parasites. Each parasite contains up to 16 daughter merozoites, which are released into www.miltenyibiotec.com the blood stream to invade new RBCs. During Purification of P. falciparum–infected its 48-hour development cycle the parasite erythrocytes using the autoMACS® Pro digests 65–70% of the host cell hemoglobin Separator producing insoluble hemozoin as a by- Following the 30-minute incubation in RPMI, product. The magnetic properties of hemozoin the cells were gently resuspended. The sample allow the isolation of parasitized erythrocytes. was split into five 10-mL aliquots in 15-mL Techniques for the in vitro cultivation of P. tubes and kept at 37 °C prior to separation. falciparum are well established and relatively The first sample was placed in position A1 of high parasitemia can be achieved, though this a Chill 10 Rack at room temperature. Empty is dependent on the particular parasite line 15-mL tubes for the collection of the negative and skill of operator. In this report we present and positive fractions were place in position B1 a protocol for the rapid magnetic purification and C1, respectively. The rack was placed onto of P. falciparum–infected RBCs from in vitro the MACS® MiniSampler of the autoMACS® cultures using the autoMACS® Pro Separator. Pro Separator. Cell enrichment was performed Extracts prepared from purified parasites using program PMalaria. The remaining exhibited prolyl aminopeptidase activity. samples were consecutively processed in the same way. Prior to separation each sample was Materials and methods gently mixed to resuspend cells. Preparation of parasite cultures P. falciparum parasites were cultured and Assessment of yield synchronized in vitro using established All positive fractions were combined and methods²,³. An in vitro culture of trophozoite- centrifuged at 400×g for 5 minutes. The stage parasites at 3–5% parasitemia was supernatant was discarded. Approximately used for further processing. Ten mL of the 3 μL of the cell pellet was smeared onto a parasite culture (equivalent to 500 µL packed microscope slide, fixed with methanol and cell volume) were centrifuged at 400×g for stained with Giemsa solution. Parasitemia was 5 minutes, and the supernatant was discarded. determined microscopically. Cells were washed twice with pre-warmed (37 °C) RPMI. Subsequently, the 500-µL cell Prolyl aminopeptidase activity assay sediment was resuspended in 50 mL RPMI Purified parasites were hypotonically lysed (equivalent to a 1% hematocrit), and incubated with distilled water to obtain active malarial in a water bath at 37 °C for 30 minutes. extract. Enzymatic activity of the prolyl aminopeptidase, PfS33PAP, in malaria Vol 15 • 1/2013 MACS & more 31 Report Submitting your abstract is easy “I want to be a Pro!” Abstract Awards Miltenyi Biotec is happy to announce a new grant program aimed at accelerating innovative research. Submit an abstract describing how you would use an autoMACS® Pro Separator to advance your research and you could win a substantial credit towards its purchase. Become a Pro today! Entering is as easy as 1-2-3 1.Visit www.123.autoMACSPro.com – the official “I want to be a Pro!” Abstract Awards website 2.Tell us in 500 words or less how you would use the autoMACS® Pro Separator to advance your research 3.Submit your abstract Submissions must be received by midnight, July 15, 2013. Winners will be announced via e-mail on July 30, 2013. miltenyibiotec.com 32 MACS & more Vol 15 • 1/2013 www.miltenyibiotec.com Report Results and discussion Enrichment of P. falciparum–infected RBCs Cultures of trophozoite stage P. falciparum– infected RBCs at between 3 and 5% parasitemia were enriched to give a parasitemia of 80–85% following one round of enrichment using the autoMACS Pro Separator (fig. 1). 100 Relative activity (%) 80 60 40 20 H-Pro-NHMec + o-phenanthroline H-Pro-NHMec H-Leu-NHMec + o-phenanthroline H-Ala-NHMec + o-phenanthroline H-Leu-NHMec 0 H-Ala-NHMec parasites was determined by addition of extract aliquots to the fluorogenic substrate H-ProNHMec. Reactions were carried out in 96-well microtiter plates (100 µL total volume, 60 min incubation at 37 °C) using a spectrofluorimeter with excitation at 370 nm and emission at 460 nm. Initial rates were obtained over a range of substrate concentrations in 50 mM Tris-HCl, pH 7.5. To ensure the prolyl aminopeptidase activity was not due to malarial or human metalloproteases, aliquots of malarial extract were pre-incubated (10 min, 37 °C) with 2 mM of the metal chelator o-phenanthroline in 50 mM Tris-HCl and then assayed for activity against H-Pro-NHMec, H-Ala-NHMec, H-Leu-NHMec, and H-Glu-NHMec. To distinguish the PfS33PAP activity from a second putative P. falciparum prolyl aminopeptidase, extracts from a PfS33PAP knockout parasite line were tested for H-ProNHMec activity and compared to 3D7 wild type parasites. Assays were performed in the presence of 2 mM phenathroline to inhibit metalloprotease activity. Figure 2 H-Pro-NHMec hydrolysis in P. falciparum extracts. Hydrolysis was measured in the presence or absence of the metal chelator o-phenanthroline (2 mM) as described in the materials and methods section. Data reflect the mean relative hydrolysis activity (n=2) of 3D7 extract with 200 µM H-Pro-NHMec, 10 µM H-Ala-NHMec, and 5 µM H-Leu-NHMec as substrates. P. falciparum extracts contain prolyl aminopeptidase activity Soluble extracts of hypotonically lysed wild type parasites exhibited prolyl aminopeptidase activity towards H-Pro-NHMec, which was only partially inhibited by the metal chelator o-phenanthroline (fig. 2). In contrast, aminopeptidase activities towards the substrates H-Ala-NHMec, H-Leu-NHMec were completely inhibited by the chelator. This result indicates that at least part of the prolyl aminopeptidase activity was not due to malarial or human metalloproteases. To distinguish between PfS33PAP activity and that of a second putative malarial prolyl aminopeptidase, we compared the enzymatic activity in extracts of wild type and a PfS33PAP knockout strain and found that o-phenanthroline-insensitive prolyl aminopeptidase activity was reduced in the knockout (fig. 3). The remaining activity in the knockout might be due to a second as yet uncharacterized prolyl aminopeptidase. H-Pro-NHMec + o-phenanthroline Relative activity (%) 100 80 60 40 20 0 Wild type Figure 1 P. falciparum–infected erythrocytes isolated using the autoMACS Pro Separator. The image shows a light-microscopic view of a Giemsastained thin smear of enriched infected cells. www.miltenyibiotec.com PfS33PAP knockout Figure 3 H-Pro-NHMec hydrolysis in extracts from 3D7 wild type and PfS33PAP knockout. Prolyl aminopeptidase activity was measured using extracts prepared from wild type and the PfS33PAP knockout strain. Tests were performed in the presence of 2 mM o-phenanthroline. Vol 15 • 1/2013 MACS & more 33 Report Conclusion • PfS33 PAP enzyme activity was detected • The autoMACS® Pro Separator allows the in extracts prepared from wild type quick and efficient isolation of P. falciparum– P. falciparum parasites, and was reduced in infected RBCs to high purities. extracts prepared from a transgenic PfS33 • Use of the autoMACS Pro Separator PAP knockout parasite line. minimizes manual handling steps during separation, enabling operator-independent References 1.World Malaria Report 2008. Available at separation results. ht t p : / / w w w. w h o. i nt / m a l a r i a / w m r 2 0 0 8 / • Enzyme activity can be measured in extracts malaria2008.pdf prepared from P. falciparum malaria parasites 2. Trager, W. and Jensen, J.B. (1976) Science 193: 673–675. purified with the autoMACS® Pro Separator. MACS Product* Order no. autoMACS Pro Separator – Starter Kit 130-092-545 * Products are for research use only. 3.Lambros, C. and Vanderberg, J.P. (1979) J. 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