New CSC computing resources
Transcription
New CSC computing resources
New CSC computing resources Per Öster, CSC – IT Center for Science Ltd. [email protected] Outline CSC at glance New Kajaani Data Centre Finland’s new supercomputers – Sisu (Cray XC30) – Taito (HP cluster) CSC resources available for researchers 25.01.2013 CSC presentation @ JYFL CSC’s Services FUNET Services Computing Services Application Services Data Services for Science and Culture Information Management Services 25.01.2013 CSC presentation @ JYFL Universities Polytechnics Ministries Public sector Research centers Companies CSC at glance Founded in 1971 – technical support unit for Univac 1108 Connected Finland to Internet in 1988 Reorganized as a company, CSC – Scientific Computing Ltd. in 1993 All shares to the Ministry of Education and Culture of Finland in 1997 Operates on a non-profit principle Facilities in Espoo and Kajaani Staff ~250 people Turnover 2011 27.3 million euros 25.01.2013 CSC presentation @ JYFL Users About 700 active computing projects – 3000 researchers use CSC’s computing capacity – 4250 registered customers Haka identity federation covers 100% of universities and higher education institutes (287 000 users) Funet - Finnish research and education network – Total of 360 000 end users 25.01.2013 CSC presentation @ JYFL Users of computing resources by discipline 3Q/2012 (total 1305 users) Biosciences 37 31 27 25 Physics 141 389 44 Nanoscience Chemistry Language research 123 Grid usage Computational fluid dynamics Computational drug design 126 129 233 Earth sciences Engineering Other Usage of processor time by discipline 3Q/2012 (total 2012 96 million cpuh) Physics 2% 6% 3% 2% 1% Nanoscience 2% 35% 6% Chemistry Biosciences Astrophysics 11% Grid usage Environmental sciences 32% Computational fluid dynamics Computational drug design Other Usage of processor time by organization 3Q/2012 (total 2012 96 million cpuh) 2% 6% 8% 2% University of Helsinki 1% 1% Aalto University 26% 8% University of Jyväskylä CSC (Grand Challenge) Tampere University of Technology Lappeenranta University of Technology CSC (PRACE) 9% 14% 23% University of Oulu University of Turku CSC (HPC-Europa2) Other Largest JY Projects 2012 Jyväskylän yliopisto CPUh Karoliina Honkala Nanokatalyysi metallipinnoilla Nanotiede Nanohiukkasten elektroniset, magneettiset, Hannu Häkkinen optiset ja kemialliset ominaisuudet Nanotiede Olli Pentikäinen Filamins (Fil) Olli Pentikäinen Tuomas Lappi Laskennallinen rakennetutkimus Biotieteet RIALM-rapid identification of active ligans molecules Lääkeainesuunnittelu Kvantti-ilmiöt ja niiden kontrolli elektronisissa nanorakenteissa Nanotiede QCD suurilla energioilla relativistisissa raskasionitörmäyksissä Fysiikka Jussi Toivanen Robert van Leeuwen FIDIPRO-projekti Time-dependent correlated quantum transport throught nanostructures … …. …. Olli Pentikäinen Esa Räsänen Biotieteet % 4690904.94 4.88 37.18 3277382.42 3.41 25.98 1249305.1 1.3 9.9 929121.7 0.97 7.36 657792.75 0.68 5.21 581023.32 0.6 4.61 365875.28 0.38 2.9 Fysiikka 200496.82 0.21 1.59 Fysiikka 196733.75 0.2 1.56 … … … 12616824.06 13.11 100 Yht. 25.01.2013 % CSC presentation @ JYFL FUNET and Data services FUNET – Connections to all higher education institutions in Finland and for 37 state research institutes and other organizations – Network Services and Light paths – Network Security – Funet CERT – eduroam – wireless network roaming – Haka-identity Management – Campus Support – The NORDUnet network Data services – Digital Preservation and Data for Research Data for Research (TTA), National Digital Library (KDK) International collaboration via EU projects (EUDAT, APARSEN, ODE, SIM4RDM) – Database and information services Paituli: GIS service Nic.funet.fi – freely distributable files with FTP since 1990 CSC Stream Database administration services – Memory organizations (Finnish university and polytechnics libraries, Finnish National Audiovisual Archive, Finnish 25.01.2013 CSC Gallery) presentation @ JYFL National Archives, Finnish National CSC and High Performance Computing 25.01.2013 CSC presentation @ JYFL CSC Computing Capacity 1989–2012 Standardized processors Cray XC30 max. capacity (80%) capacity used 10000 Cray XT5 1000 Cray T3E expanded Cray T3E (224 proc) (192 proc) 100 HP CP4000BL Proliant 465c DC AMD IBM SP Power3 Compaq Alpha cluster (Clux) SGI upgrade Convex 3840 SGI Origin 2000 IBM upgrade SGI R4400 SGI upgrade Murska decommissioned 6/2012 Sun Fire 25K IBM SP2 IBM SP1 HP Proliant SL230s HP DL 145 Proliant 10 Cray X-MP/416 HP CP4000 BL Proliant Cray XT4 QC 6C AMD Cray T3E expanded (512 proc) Cray C94 1 Cray XT4 DC IBM eServer Cluster 1600 Two Compaq Alpha Servers (Lempo and Hiisi) Federation HP switch upgrade on IBM Cray T3E decommissioned 12/2002 Clux and Hiisi decommissioned 2/2005 Cray T3E IBM SP2 decommissioned (64 proc) 1/1998 Convex C220 1989 1990 1991 1992 1993 1994 1995 1996 1997 1998 1999 2000 2001 2002 2003 2004 2005 2006 2007 2008 2009 2010 2011 2012 50. Top500 rating 1993–2012 100. The Top500 lists http://www.top500.org/ were started in 1993. Cray T3E IBM eServer p690 Cray XT4/XT5 Cray XC30 150. 250. HP Proliant SL230s HP Proliant 465c DC 200. SGI Power Challenge IBM SP2 SGI Origin 2000 300. 350. Cray C94 400. 25.01.2013 HP Proliant 465c 6C IBM SP1 Digital AlphaServer 450. 500. IBM SP Power3 Cray X-MP Convex C3840 CSC presentation @ JYFL THE NEW DATACENTER 25.01.2013 CSC presentation @ JYFL New site drivers • Capacity limiting growth • Costs increasing – Tax – Energy – Carbon neutral • New site focused on efficiency and capacity estimate 11GWh CSCs Datacenter Energy Use 2005 - 2011 10 9 DC 2 max. DC 2 Infra DC 2 IT DC 1 Infra DC 1 IT 8 7 DC 1 max. 6 Energy GWh – Super computers – Managed hosting – Diversity of requirements 2012 5 4 3 2 1 0 2005 2006 2007 2008 2009 +2,2GWh/y as leased capacity! 2010 2011 25.01.2013 CSC presentation @ JYFL 25.01.2013 CSC presentation @ JYFL Power distribution (FinGrid) Last site level blackout in the early 1980s 25.01.2013 CSC presentation @ JYFL CSC started ITI Curve monitoring early Feb-2012 The machine hall 25.01.2013 CSC presentation @ JYFL Sisu (Cray) supercomputer housing 25.01.2013 CSC presentation @ JYFL SGI Ice Cube R80 hosting Taito (HP) Starting with one head unit (Vestibule) and two expansion modules ; extra capacity can be increased by introducing more expansion units. Thanks to dozens of automated cooling fans, the energy needed for cooling can be adjusted very accurately as IT capacity is increased gradually. Assembly in Italy Internal temperature setpoint 27OC (ASHRAE) and occasionally ASHRAE tolerated (27-30OC) during possible summer heat waves. As long as outdoor temperatures are less than 28OC, Unit does nothing but free cooling. During heat waves extra water and some chillers possibly needed. During winter, the exhaust (warm) air is re-circulated to warm up the incoming air. 25.01.2013 CSC presentation @ JYFL SGI Ice Cube R80 25.01.2013 CSC presentation @ JYFL Data center specification 2.4 MW combined hybrid capacity 1.4 MW modular free air cooled datacenter – Upgradable in 700 kW factory built modules – Order to acceptance in 5 months – 35 kW per rack (extra tall) – 12 kW common in industry – PUE forecast < 1.08 (pPUEL2,YC) 1MW HPC datacenter – Optimised for Cray super & T-Platforms prototype – 90% Water cooling 25.01.2013 CSC presentation @ JYFL CSC NEW SUPERCOMPUTERS 25.01.2013 CSC presentation @ JYFL Overview of New Systems Phase 1 Cray Deployment Dec. 2012 CPU Phase 2 HP Cray Now Intel Sandy Bridge 2x8 cores @ 2.6 GHz HP Probably 2014 next generation processors Aries ≤10GB/s FDR InfiniBand ≤7GB/s Aries EDR InfiniBand (100 Gbps) Cores 11776 9216 ~ 40 000 ~ 17 000 Tflops 244 (2.4x Louhi) 180 (5x Vuori) 1700 (16x Louhi) 515 (15x Vuori) Interconnect Tflops total 25.01.2013 424 (3.6xCSCLouhi) presentation @ JYFL 2215 (20.7x Louhi) IT summary Cray XC30 supercomputer (Sisu) – Fastest computer in Finland – Phase 1: 385 kW, 244 Tflop/s – Very high density, large racks T-Platforms prototype (Phase 2) – Very high density hot-water cooled rack – Intel processors, Intel Xeon Phi and NVIDIA Kepler accelerators – Theoretical 400 TFlops performance 25.01.2013 CSC presentation @ JYFL IT summary cont. HP (Taito) – 1152 Intel CPUs (sockets) – 180 TFlop/s – 30 kW 47 U racks HPC storage – 1 + 1.4 + 1.4 = 3.8 PB of fast parallel storage – Aggregate BW 20 -> 48.8 -> 77.6 GB/s – Supports Cray and HP systems 25.01.2013 CSC presentation @ JYFL Features Cray XC30 – Completely new system design Departure from the XT* design (2004) – First Cray with Intel CPUs – High-density water-cooled chassis ~1200 cores/chassis – New ”Aries” interconnect HP Cluster – Modular SL-series systems – Mellanox FDR (56 Gbps) Interconnect 25.01.2013 CSC presentation @ JYFL CSC new systems: What’s new? Sandy Bridge CPUs – 4->8 cores/socket – ~2.3x Louhi flops/socket 256-bit SIMD instructions (AVX) Interconnects – Performance improvements Latency, bandwidth, collectives – 0.25-3.7µs, ≤10 GB/s One-sided communication – New topologies 25.01.2013 Cray: ”Dragonfly”: Islands of 2D Meshes HP: Islands of CSC fat presentation trees @ JYFL Cray Dragonfly Topology All-to-all network between groups 2 dimensional all-to-all network in a group Optical uplinks to inter-group net Source: Robert Alverson, Cray Hot Interconnects 2012 keynote 25.01.2013 CSC presentation @ JYFL Cray environment Typical Cray environment Compilers: Cray, Intel and GNU Debuggers – Totalview, tokens shared between HP and Cray Cray MPI Cray tuned versions of all usual libraries SLURM Module system similar to Louhi Default shell now bash (previously tcsh) 25.01.2013 CSC presentation @ JYFL HP Environment Compilers: Intel, GNU MPI libraries: Intel, mvapich2, OpenMPI Batch queue: SLURM New more robust module system – Only compatible modules shown with module avail – Use module spider to see all Default shell now bash (used to be tcsh) Disk system changes 25.01.2013 CSC presentation @ JYFL Core development tools Intel XE Development Tools – Compilers C/C++ (icc), Fortran (ifort), Cilk+ – Profilers and trace utilities Vtune, Thread checker, MPI checker – MKL numerical library – Intel MPI library (only on HP) Cray Application Development Environment GNU Compiler Collection TotalView debugger 25.01.2013 CSC presentation @ JYFL Performance of numerical libraries DGEMM 1000x1000 Single-Core Performance 30.00 Turbo Peak (when only 1 core is used) @ 3.5GHz * 8 Flop/Hz 25.00 Peak @ 2.7GHz * 8 Flop/Hz GFlop/s 20.00 Sandy Bridge 2.7GHz Opteron Barcelona 2.3GHz (Louhi) 15.00 Peak @ 10.00 2.3GHz * 4 Flop/Hz 5.00 0.00 ATLAS 3.8 RedHat 6.2 RPM ATLAS 3.10 ACML 5.2 Ifort 12.1 matmul MKL 12.1 LibSci ACML 4.4.0 MKL 11 MKL the best choice on Sandy Bridge, for now. (On Cray, LibSci will likely be a good alternative) 25.01.2013 CSC presentation @ JYFL Compilers, programming Intel – Intel Cluster Studio XE 2013 – http://software.intel.com/en-us/intel-clusterstudio-xe GNU – GNU-compilers, e.g. GCC 4.7.2. – http://gcc.gnu.org/ Intel can be used together with GNU – E.g. gcc or gfortran + MKL + IntelMPI mvapich2 MPI-library also supported – It can be used that Intel or GNU 25.01.2013 CSC presentation @ JYFL Available applications Ready: – Taito: Gromacs, NAMD, Gaussian, Turbomole, Amber, CP2K, Elmer, VASP – Sisu: Gromacs, GPAW, Elmer, VASP CSC offers ~240 scientific applications – Porting them all is a big task – Most if not all (from Vuori) should be available Some installations upon request – Do you have priorities? 25.01.2013 CSC presentation @ JYFL Porting strategy At least recompile – Legacy binaries may run, but not optimally – Intel compilers preferred for performance – Use Intel MKL or Cray LibSci (not ACML!) http://software.intel.com/sites/products/mkl/ – Use compiler flags (i.e. -xhost -O2 (includes –xAVX)) Explore optimal thread/task placement – Intra-node and internode Refactor the code if necessary – OpenMP/MPI workload balance – Rewrite any SSE assembler or intrinsics 25.01.2013 CSC presentation @ JYFL Modules Some software installations are conflicting with each other – For example different versions of programs and libraries Modules facilitate the installation of conflicting packages to a single system – User can select the desired environment and tools using module commands – Can also be done "on-the-fly" 25.01.2013 CSC presentation @ JYFL Key differencies (Taito vs. Vuori) module avail shows only those modules that can be loaded to current setup (no conflicts or extra dependencies) – Use module spider to list all installed modules and solve the conflics/dependencies No PrgEnv- modules – Changing the compiler module switches also MPI and other compiler specific modules 25.01.2013 CSC presentation @ JYFL Disks at Espoo 25.01.2013 CSC presentation @ JYFL Kajjaani 60-70% capacity for users Appl LOT3 1+1+2PB=> 70% = 716 TB+ 716 TB+ 1 433 TB Cloud min. 300GB SUPER 11 Scratch WRKDR Going to oblivion... Work Appl Work2 Appl Work Existing gear in Espoo SAN SAN Lustre servers Lustre servers Murska DDN Infiniband Global Lustre Servers LOT2 Cluster capacity LOT1 Infiniband Louhi Login Nodes Cloud capacity SL8500 iSCSI servers Aurinkokunta NFS servers LAN NFS Extreme SSD? Vuori Login Nodes IDA PROJ Hippu1-4 Internet NFS LAN ???? Valopolku™ Slow but possible way of showing remote exports 10-15ms lag SAN DATA 11 IDA PROJ DATA 11 HA -NFS servers Backup iRods Data synchronisation HA -NFS servers Existing Gear Transported to K Backup DATA11 Lot2 (DMF) SAN VSP 25.01.2013 CSC presentation @ JYFL Home 2TB! General HUS Backup spool TTA HUS Kvault irods Evault irods Evault irods Tape Robot HUS T-finity 5 PB=> Backup spool Home 2TB! 10K Disks at Kajaani sisu.csc.fi taito.csc.fi login nodes login nodes Your workstation SUI iRODS client compute nodes compute nodes $WRKDIR New tape $ARCHIVE in Espoo $HOME $TMPDIR $TMPDIR $TMPDIR $TMPDIR $TMPDIR iRODS interface disk cache (Kajaani & Espoo) icp, iput, ils, irm $USERAPPL → $HOME/xyz 25.01.2013 icp CSC presentation @ JYFL Disks 2.4 PB on DDN – New $HOME directory (on Lustre) – $WRKDIR (not backed up), soft quota ~ 5 TB $ARCHIVE ~1 - 5 TB / user, common between Cray and HP Disk space through IDA – – – – 1 PB for Univerisities 1 PB for Finnish Academy (SA) 1 PB to be shared between SA and ESFRI Additional 3 PB available later on /tmp (around 2 TB) to be used for compiling codes 25.01.2013 CSC presentation @ JYFL Moving files, best practices tar & bzip first rsync, not scp – rsync -P [email protected]:/tmp/huge.tar.gz . Blowfish may be faster than AES (CPU bottleneck) Funet FileSender (max 50 GB) – https://filesender.funet.fi – Files can be downloaded also with wget Coming: iRODS, batch-like process, staging IDA CSC can help to tune e.g. TCP/IP parameters – http://www.csc.fi/english/institutions/funet/networkservices/pert FUNET backbone 10 Gbit/s 25.01.2013 CSC presentation @ JYFL IDA storage service Common storage service for research Safe storage with quaranteed integrity and duplication management for both data and metadata IDA service promise The IDA service quarantees data storage till at least end of year 2017. By that timeline it will be decided if IDA or some other service solution (for example Long Term Storage solution) continues to serve as data storage. If some other solution is available, the data will be automatically transferred to this service, no interaction needed from users. The IDA service quarantees at least 3 petabytes stporage capacity. When transferring data to IDA, some metadata will automatically be attached to the data. During this time period, there are no costs to the user within agreed service policy. Owners of data can decide on data use, openness and data policy. TTA strongly recommends clear ownership and IPR management for all datasets After 2017, metadata attached to datasets has to be more extensive than minumum metadata. Datasets served by TTA Projects funded by Finnish Academy (akatemiahankkeet, huippuyksiköt, tutkimusohjelmat and tutkimusinfrastruktuurit) – 1 PT capacity Universities and Polytechnics – 1 PT capacity ESFRI-projects (tex. BBMRI, CLARIN) Other important research projects via special application process Contact at JY: Antti Auer SA hankke et 1 PB Korkea -koulut 1 PB ESFRIt, FSD, pilotit ja lisäosuudet 1 PB IDA Interface ARCHIVE, dos and don’ts Don’t put small files in $ARCHIVE – – – – Small files waste capacity Less than 10 MB is small Keep the number of files small Tar and bzip files Don’t use $ARCHIVE for incremental backup (store, delete/overwrite, store, …) – Space on tape is not freed up until months or years! Maximum file size 300GB Default quota 2 TB per user, new likely up to 5 TB New ARCHIVE being installed, consider if you really need all your old files. Transfer from old to new needed. 25.01.2013 CSC presentation @ JYFL Use Profiles Taito (HP) Sisu (Cray XE30) – Serial and parallel upto about 256 cores (TBD) 25.01.2013 – Parallel up to thousands of cores – Scaling tests CSC presentation @ JYFL Queue/server policies Longrun queue has drawbacks – Shorter jobs can be chained Apps that can’t restart/write checkpoint? – Code you use to run very long jobs? Large memory jobs to Hippu/HP big memory nodes – Think about memory consumption Minimum job size in Cray – Your input? 25.01.2013 CSC presentation @ JYFL Documentation and support User manual being built, FAQ here: – https://datakeskus.csc.fi/en/web/guest/faq-knowledge-base – Pilot usage during acceptance tests User documetation’s link collection – http://www.csc.fi/english/research/sciences/chemistry/intro Porting project – All code needs to be recompiled – Help available for porting your code List of first codes, others added later, some upon request User accounts – HP: recent vuori users moved automatically – Cray: recent Louhi users moved automatically – Others: request from [email protected] with current contact information 25.01.2013 CSC presentation @ JYFL Grand Challenges Normal GC call (deadline 28.01.2013) – new CSC resources available for a year – no bottom limit for number of cores Special GC call (mainly for Cray) (deadline 28.01.2013) – possibility for short (day or less) runs with the whole Cray – What do you need? Remember also PRACE/DECI – http://www.csc.fi/english/csc/news/customerinfo/DECI1 0callopen 25.01.2013 CSC presentation @ JYFL How to prepare for new systems Participate in system workshops Try Intel/GNU compiler in advance, PGI upon request Check if your scripts/aliases need fixing (bash) A lot of resources available in the beginning: prepare ahead what to run! The traditional wisdom about good application performance will still hold – Experiment with all compilers and pay attention on finding good compiler optimization flags – Employ tuned numerical libraries wherever possible – Experiment with settings of environment variable that control the MPI library – Mind the I/O: minimize output, checkpoint seldom 25.01.2013 CSC presentation @ JYFL Accelerators Add-on processors Graphics Processing Units – de facto accelerator technology today Fast memory Many lightweight cores Influencing general purpose computing Accelerator Memory 25.01.2013 CPU(s) PCIe bus CSC presentation @ JYFL InfiniBand node(s) Evolution of CPU and GPU performance Memory bandwidth Energy efficiency 180.00 16 160.00 14 140.00 12 Peak GFlop/s watt Gbyte/s 120.00 100.00 80.00 60.00 8 2 20.00 0.00 0 2008 2009 2010 2011 GPU CPU 6 4 40.00 25.01.2013 10 2012 CSC presentation @ JYFL Future directions in parallel programming MPI-3 standard being finalized – Asynchronous collective communication etc. Partitioned Global Address Space (PGAS) – Data sharing via global arrays – Finally starting to see decent performance – Most mature: Unified Parallel C, Co-Array Fortran (in Fortran 2008), OpenSHMEM Task Dataflow-based parallel models – Splits work into a graph (DAG) of tasks – SmpSs, DAGUE, StarPU 25.01.2013 CSC presentation @ JYFL CSC PRESENT RESOURCES AVAILABLE FOR RESEARCHERS 25.01.2013 CSC presentation @ JYFL Currently available computing resources Massive computational challenges: Louhi – > 10 000 cores, >11TB memory – Theoretical peak performance > 100 Tflop/s HP-cluster Vuori – Small and medium-sized tasks – Theoretical peak performance >40 Tflop/s Application server Hippu – Interactive usage, without job scheduler – Postprocessing, e.g. vizualization FGI 25.01.2013 CSC presentation @ JYFL Novel resources at CSC Production (available for all Finnish researchers) – Vuori: 8 Tesla GPU nodes – FGI: 88 GPUs (44 Tesla 2050 + 44 Tesla 2090) GPU nodes located at HY, Aalto, ÅA, TTY Testing (primarily for CSC experts) – Tunturi: Sandy Bridge node, cluster Porting to AVX instruction set – Mictest: Intel MIC prototype node Several beta cards 25.01.2013 CSC presentation @ JYFL Old capacity decommissions Louhi decommissioned after new Cray is up and running – probably fairly short overlap Vuori decommission TBD Think ahead and plan if you have data to transfer! 25.01.2013 CSC presentation @ JYFL NX for remote access Optimized remote desktop access – Near local speed application responsiveness over high latency, low bandwidth links Customized launch menus offer direct access CSC supported applications Working session can saved and restored at the next login Further information: http://www.csc.fi/english/research/software/freenx 25.01.2013 CSC presentation @ JYFL NX screenshot 25.01.2013 CSC presentation @ JYFL Customer training Taito (HP) – Taito cluster workshop(s) in Q1, 2013 Sisu (Cray) – February 26 - March 1, 2013 (mostly for pilot users, open for everyone) – May 14 - May 17 (for all users, a PATC course, i.e. expecting participants from other countries too) 25.01.2013 CSC presentation @ JYFL CSC Cloud Services 25.01.2013 CSC presentation @ JYFL Three service models of cloud computing Software SaaS Operating systems PaaS Computers and networks IaaS 25.01.2013 CSC presentation @ JYFL Example: Virtualization in Taito Taito cluster: two types of nodes, HPC and cloud HPC node HPC node Cloud node Host OS: RHEL Virtual machine • Guest OS: Ubuntu Cloud node 25.01.2013 CSC presentation @ JYFL Virtual machine • Guest OS: Windows Traditional HPC vs. IaaS Traditional HPC environment Cloud environment Virtual Machine Operating system Same for all: CSC’s cluster OS Chosen by the user Software installation Done by cluster administrators Customers can only install software to their own directories, no administrative rights Installed by the user The user has admin rights User accounts Managed by CSC’s user administrator Managed by the user Security e.g. software patches CSC administrators manage the common software and the OS User has more responsibility: e.g. patching of running machines Running jobs Jobs need to be sent via the cluster’s Batch Scheduling System (BSS) The user is free to use or not use a BSS Environment changes Changes to SW (libraries, compilers) happen. The user can decide on versions. Snapshot of the environment Not possible Performance 25.01.2013 Can save as a Virtual Machine image Performs well for a variety of tasks CSC presentation @ JYFL Very small virtualization overhead for most tasks, heavily I/O bound and MPI tasks affected more Cloud: Biomedical pilot cases Several pilots (~15) Users from several institutions, e.g. University of Helsinki, Finnish Institute for Molecular Medicine and Technical University of Munich Many different usage models, e.g.: Extending existing cluster Services run on CSC IaaS by university IT department for end users (SaaS for end users) 25.01.2013 CSC presentation @ JYFL Conclusion 25.01.2013 CSC presentation @ JYFL Conclusions Performance comparison The most powerful computer(s) in Finland 25.01.2013 60 taito 50 Sisu (estimated) FGI 40 ns/day – Per core performance ~2 x compared to Vuori/Louhi – Better interconnects enhance scaling – Larger memory – Smartest collective communications dhfr benchmark, 30k atoms, PME, Gromacs vuori 30 louhi 20 10 0 0 10 20 cores CSC presentation @ JYFL 30 40 Sisu&Taito vs. Louhi&Vuori vs. FGI vs. Local Cluster Availability CPU Sisu&Taito (Phase 1) Louhi&Vuori 1Q/2Q 2013 Available Intel Sandy AMD Opteron 2.3 GHz Barcelona and 2.7 Bridge, 2 x 8 GHz Shanghai / 2.6 cores, 2.6 GHz, GHz AMD Opteron Xeon E5-2670 and Intel Xeon FGI Merope Available Available Intel Xeon, 2 x 6 cores, 2.7 GHZ, X5650 Interconnect Aries / FDR IB SeaStar2 / QDR IB Cores 11776 / 9216 10864 / 3648 2 / 4 GB 16x 256GB/node 1 / 2 / 8 GB Tflops 244 / 180 102 / 33 95 8 Acc. nodes in Phase2 -/8 88 6 Disc25.01.2013 space 2.4 PB 110 / 145 TB 1+ PB 100 TB RAM/core CSC presentation @ JYFL QDR IB 7308 748 2 / 4 / 8 GB 4 / 8 GB