Inbreeding in the Utah Mormons: an evaluation of estimates based
Transcription
Inbreeding in the Utah Mormons: an evaluation of estimates based
Aft\~~ 3.-'l_ &o A c... ANNALS OF_HUMAN GENETICS VOL. 53 PART 4 OCTOBER 1989 CONTENTS (All rights reserved) PAGE I. II. III. IV. V. VI. VII. VIII. IX . Isolation of a human cytochrome P-450 reductase eDNA clone and localization of the corresponding gene to chromosome 7qll.2. E . A. SHEPHARD , I. R. PHILLIPS , I. SANTISTEBAN , L. F . WEST, C. N. A. PALMER, A. AsHWORTH and S. PovEY . . ..\new genetic polyn10rphism in the 16S ribosomal RNA gene of human mitochondrial DXA. A. B. MEHTA , T . VGLLIAMY, E. C. GoRDON-SMITH and L. Lt:ZZATTO . . Restriction fragment length polymorphism of human mitochondrial DNA in a sample population from Apulia (Southern Italy). G. DEBENEDICTIS, G. RosE, G. PASSARL'iO and C. Qu AGLIARIELLO Mitochondrial DNA polymorphism detected with the restriction enzymes BstNI and Bell in a French Canadian population. Y. GELDiAS, L. TuRCOTTE, C. BoucH.u.n, M.-C. THIBAULT and F . T. DIONNE Subtypes of HLA -DQ and -DR defined by DQBl and DRBt RFLPs : allele frequencies in the general population and in insulin-dependent diabetes (IDDM) and multiple sclerosis patients. K . J. GoooLIN, V. J. KoLAGA, L . BAKER, R. P. LISAI , C. M. ZMIJEWSKI and R. S. SPIELMAN J Inbreeding in the Utah Mormons: an evaluation of estimates based on pedigrees, isonymy, and migration matrices. L. B. JoRDE. Recursive descent probabilities for rare recessive lethals. E. A. THoMPSON and K. MORGAN Analysing rearrangement breakpoint distributions by means of binomial confidE-nce inte n ·als . K . VASARHELYI and J . M. FRIEDMA~ . Testing for non·randomness of events in sparse data situations. R . E. TARONE Books received 291-301 303- 310 311-318 319--325 327-338 339--355 357-374 375--380 381- 387 389--390 © University College London 1989 PRINTED IN GREAT BRITAIN BY THE UNIVERSITY PRESS , CAMBRIDGE f\o.~\~ 339 Ann Hum . r:u1Pt . (19S9 l . 53 . 339- 3.'>5 Printed in G'rPal Britain Inbreeding in the Utah Mormons: an evaluation of estimates based on pedigrees, isonymy, and migration matrices L. B. JORDE Department of Human Genetirs. Cnitersity of Ctah School of Jledicine. Salt Lake City. Ctah 8-1132. CSA Sl".)DL\RY l.:'ing a computerizPd genPalogieal databasP. inbreeding coefficients were calculated for a of -!3i) 171 l·tah ~lormons. ThP population was di\·id('d into ten t('n-ypar birth ('Ohorts ~amplt> (1 '-!6- 19-!5) and:!:! geographic "ubdi\·isions in order to assess temporal and spatial \·ariation in inbrPPding. The an,rage inbreeding coefficient for this population is 0·000 106. The a\·Prage within-groups random kinship coefficient is 0·000 312. reflecting consanguinity a Yoidance. Random kinship matricPs were formed by estimating thP a\·cragc kinship within each spatial . . ubdi\·ision and betwepn all pairs of subdh·isions. These matrices were compared statistically with kinship matrices pre\'iously estimated using migration matrices and isonymy. data. The i onymy approach consistently o\·erestimates random and total inbreeding as well as \rright's F81 . This can be attributPd primarily to the assumption of monophyletic origin of surnames. The migration matrix method underestimates random inbrPPding and F51 • This is due mainly to the a:-\~umption that out:-:idP immigrant:-; arC' deri\·cd from a genPtiC'all~· homogen('ous population. \\'hill' t}w ah~olute Yalucs of the kin:-;hip (·ocffieient:' p:-;timated by ('aeh method diffPr .. u b~tant ially. the pat terns of between-groups kinship codnei<'nts gi\·cn by each method are highly congruent. Logistic and linear regression analyses of 85235 marriages demonstrate that con~anguinity is significantly dependent upon year of marriage. geographic distance between husband's and wife ·s birthplaces. and thP population size of husband's and wife ·s birthplaces. I~TRODl"CTIO~ :-.;en:'ral approadw:-\ ha,·p been de,· ised to estimate inbreeding m natural population·. The mo~t direct nwthod in\·oh·e u ing pPdigrecs. but adequate pedigree data arc oftpn difficult to obtain. Indirect estimates of inbreeding can b<.' made from gene frequencies. isonymy data. and migration matrice:o;. ~ince <.'ach of these method~ in,·olves certain assumptions. mueh ean be learned about the weakne · e of earh method by comparing their rpsults in a singiP population. Earlier studies of tht:' L·tah ~lormon population han' presented r<.'sults based on gpne frcqu<.'ncies Plc·LC'IIan PIal. 198-!). migration matrices (.JorciP. 1982. 198-!). and isonymy (.Jm·de & ~!organ. 1987). Thi~ population i~ particularly useful for comparisons of this typ<.' b<.'eausp of the a\·ailability of a eomputcrizPd genealogical database that includes 1·2 million indi\·iduals. \\'ith thi:-; larae ~ample size. it is possibl<.' to :-:;ubdivid<.' tht> population in s<.'\'Pral informati\·e way:S (e.g . :-\patially and kmporall.\·) without losing stati:'tical po\\·cr. .-\lso. ~cn.'ral t_q>c~ of anc·illary data arC' a\·ailabll'. permitting an examination of eau~al factors r<.'latl'd to inbreeding. Tlw objecti\·('s of the pn's<.'nt study are twofold. First. ~patial and temporal variation in inbrePding i~" inn·stigatt•d using th<.' genealogies of -!3;) Ill l'tah-born subjeC'ts. and ('ausal H•, E :,:1 L. H.. JoRDE dekrminant~ of con:-:anguineou~ marriagP an~ Pxplored. :--lccoml. kin~hip mea. ured genea- logi('ally is compan'd with kim•hip measured by other methods in ordPr to evaluate the a~sumptions of Pach method . \\"hile other studic:-; ha\'{~ rPportPd more limitPd comparisons of kin~hip data. no pn·\·ious ~tudy has eompan·d kinship baspd on genPalogic>~. isonymy. migration matriec>s. and gc>rw frc>quen(_·it•: in tlw :-;amc population. :\fETHODS Thr l'tah Population Database includes information on the date and place of birth. marriage. and death for most indi\·iduals in thP database. Xcarly all members of the current database were members of the Church of Jesus Chri t of Latter-day Saints (LDS or · )lormons '). The analyses reportc>d here are ba ·ed on 435 777 membc>r, of the database who were born in L'tah from 1847 to 1945. Temporal \·ariation in inbreeding wa. as .. essed by dividing the ~ample into ten-year birth cohorts. As in previous studies of this population. spatial variation was evaluated by diYiding the ample into 22 spatial subdiYisions. These are known as ·stakes.' a key organizational unit in the LDS Church (see Jorde (1982) for further details). The )lorman colonization of L'tah began in 1847. Population growth. spurred by immigration and a high birth rate , was rapid: nearly 100000 )lormons inhabited Ctah in 1870. and the total population of Ptah in 1890 "'·a5 o\·er 200000 (of whom about 70 °/o were ~Iormons) (\rahlquist. 1978). Currently, 95%> of rtah's population is Caucasian. and 70o/o are members of the LDS Church Plartin et al. 1986 ). Inbreeding coefficients (F) were calculated in the standard fashion (\\'right. 1922). These coefficients were then averaged over the indiYiduals in each birth cohort and in each spatial subdi,·i:'ion. Random inbreeding (Fr) in each subdi\'ision was calculated by averaging the kin~hi}1 t'O('ffi(·i<>nt.'- of all po:-;:-;ible pair:;; of indi,· idual~ in that subdivi!"ion. \Yhi!C' :-;onw studies of rand 11111 in bre('ding exclude clo~e n:la t ives fr(lm t hi:-; (·akula t ion (e.g. Bn:nnan & Relet hford. 1983). this was not done in this study in order to make the results comparable with those of the preYious isonymy and migration matrix studies (both of which assume random mating including all relath·es). For most individuals in the computerized database. ascending gc1walogies do not predate 1800. Thus, as with any grnealogical rstimate of inbreeding. the data arP truncated. However. relati,·e to the founding Ctah population, the estimates of inbreeding be relatin~ly complete and accurate. ~ince the ~ ample sizes of some subdi,·i:sions became quite large in later timt' period~ (0\·er ~hould :?0000) . it was computationally not feasible to r:stimatt' random inbrec>ding on the complete ~amph· (:?0000 indi\·iduals would require> thP ealeulation of nearly :?00000000 kin hip (_·oeffi<'ients). Thus. in tho!'.e populations exceeding ;)000 indi\·iduals. a sam piP of .~000 wa. drawn randomly. ln three subpopulations exceedin~ .5000 in size. thP F and Fr P~timates fron: the random ~am pie wc>n' com parc>d with thosc of the <'Om pkte :am pie. In tlw~P ~ix comparisons. fi\·e of the e:-\timate::; were identic-al to fi\·e decimal plac·es. In thC' one rC'maining compari~on. the two \'HIUC'~ differc>d by 3 X 1o-s. Gi \'('n this dC'gree of agrrPment. the random ~am piing procedure appc>ar:' to lw quitE' reliable. Random kinship coefficiPnb were> al~o Pstimatcd for eaC'h pair of ~ubdi\·i~ion , in each time period . Ea(·h bc>twPc>n-groups kinship copfficient thu~'< n·prc>sents an a \·erage of m x n kinship coefficients. where m is the number of indiYiduals in one ubdi,·ision and n is the number of Inbreeding in the Ctah Jformons 3-il individuals in the other. Again. the random sampling process described above was used for 'ubdi\·i ions exceeding 5000 indi\·iduals. These values formed the off-diagonals of a random kin::~hip matrix (denoted <J)) , and the random within-groups kinship values formed the diagonals ·>f this matrix . <J) is an a priori kin hip matrix: it specifies kin ·hip relati\·e to an aneestral founder population. It i sometimes more appropriate to evaluate kinship relative to the contemporary population ("conditional' kinship). A conditional kinship matrix , R , can be obtained from <!) 'l~ing a tran~formation .. uggcsted by Harpending & .Jenkins ( 197 -l): rij - = 't' .. _ _,~.. . 't't . 1-¢.. 9; . = L; u·k 9uc (u·k is the proportion of the total 9, .. due to symmetry in <J): 9 .. = 'Li.k zci u·k 9uc where 9i _,1.. ·· +_,1.. 't't; _ _,~.. . 't'.) ( 1) . population which li\·es in The o\·erall le\·el of genetic differentiation among subdivisions. obtained from R as : Fst ubdi\·i~ion k): (\\'right. 1943). ean be (2) This quantity has also been labelled Rst (Harpending & Jenkins, 1974) and r 0 (Rogers & Harpending. 1986). The quantity estimated in (2) is a ·reduced' estimate of Fst (Febcntstein. 198:?). which has been shown to converge to equilibrium more quickly than other estimates (Roaers & Harpending, 1986: \Yood. 1986). A simpler transformation is sometimes used to 1)btain R . Thi~ in\·okes repla<'ing the nunwrator of ( l) \rith the quantity 9ii- 9 .. (Harpending & .Jenkins. 197 4: Relet hford. 19~8) . HowP\·er. a~ Harpending and .Jenkins point out. the Ia tter tran~formation is valid onl~· if the subdi\·isions are of equal size and arrayed in a rt>gular geometric arrangement such that ¢i. = 9.i =¢ .. . This is seldom the case in human population~. so the transformation given in ( 1) is preferable. This same transformation was applied to the <J) matrice ~ derived earlier from migration matrices (Jorde, 1982) and isonymy (.Jorde & )lorgan. 1987) in order to obtain comparati\·e Fst measures. The relationship between kinship and between-subdi\'ision geographic distance was asse sed by applying a centroid transformation to <J) (as in equation (1)) and then plotting the fir~t two eigen\·ectors of this matrix against one another (Lalouel. 1973). This plot. which pro\· ide~ a :!dimensional representation of the genetic di ~ tance .. among subdiYisions. was then rotated to maximum congruence with the actual geographic positions of each subdi\·ision u;;;ing h'astsquares e:stimation. The product-moment correlation (R,) between the first two eigenn'c-tor::; of <J) and those of the tran~formed geographi<- distance matrix pro\·ides a mea~ure of the fit betwepn kin ·hip and geographic distance. The relationship bet\',:een <J) and geographic distance often conforms to a negati\·e exponential di:tribution Plaleeot. 1948). Thus. a natural logarithmic transformation was applied to <J> prior to centroid transformation and eigenn'c-tor extraction. Since the element::; of<!) art> not ·tatistically inch-pendent. c·on\'entional statistical k=-h of . ignifican<:e between this matrix and geographic di:::;tanc·e are not appropriatt•. Therl'fore . stati:::;tieal ~ignific:ance was estimated Pmpiri<:ally (Jlantel. 1967: Smouse PI al. 19H(): Omr & C'hen•rud. U)H;)) . A te~t ::-;tatistic· ........ is gi,·en by Li <j LXu }~i· where X andY are thP two nMtricl~ being compared. This statistic was estimated tir~t for <J) and thP geographie distan<'e matrix ..-\ L. B. ,JORDE produt"t-moment correlation coefficient. r. was also e:-:timatt~d for X 1·s. Y. Then a distribution of 1000 additional test statistics (denoted hen' as 8*) was generated. randomly permuting the row~ and columns of one of the matrices in each comparison. The empiri<'al significance level was obtained by comparing th(• distribution of S* with S. The expectation and \'ariance of S were deriYed by :\Iantel (1967): a Z score was obtained in the ::;tandard manner u.·ing these quantitie:-- and S. ~inC'e thP distribution of Z is ,·ery similar to a I di~trihution for large n. the appro1.·imale standard error of r was obtain('d using the relationship S.E. (r) = r / Z (~okal & Rohlf. 1981 ). The :\lantel technique was also used to compare the random kinship matrices based on genealogies. isonymy , and migration matrices in each time period. The ~lantel procedure uses only the upper triangles of each matrix. excluding the diagonal elements. Since the diagonal elements of kin hip matrices contain important information. each kinship matrix was first transformed to a distance matrix using the formula: dij = if>ii + ¢ j j - 2¢ij' ln comparing random kinship estimates based on different types of data, it is particularly important to ascertain that the cohorts being considered are indeed comparable (Rogers. 1987). In this tudy, the same birth cohorts were used for each random kinship estimate. Thus. the 'offspring· used in forming parent-offspring migration matrices are the same indi,-iduals used in estimating random kinship from isonymy and from genealogical data. In a preYious analysis of isonymy data from l,.tah. logistic regression analysis was used to ·predict· whether a marriage was isonymous or not (Jorde & Morgan. 1987). The independent ,·ariables used in that analysis were year of marriage. endogamous rs. exogamous marriage (using the stake of birth as the unit ofsubdiYision). grographic distance between husband' and wife':-: (·ity of birth. and thP popul<ltion ~ize;-; of the hu:-;band'::; and \\·if<'·:-; ;-;take;-; of birth . ln the JH'<':->Pnt ;-;tudy. a ;-;imilar analysis was c·arried out. The dependPnt ,-ariahk was <·onsanguim' ous rs. non-con~anguineous marriage. and the independent ,·ariables were the same as in the pre,·ious analysis. Also, a stepwise multiple linear regression was performed. using the actual kim;hip Poefficient between husband and wife as the dependPnt variable. This analysis was performed on a subset of 85235 marriages of Ctah-born couples for whom all of the a bon• data were a\·ailable. RESrLTS TJw :'<lmplr sizrs used for each time period arr g:in~n in Table J. Tlw fir::;t eolumn gin':-> tlw total numbPr ofindi\'iduals a\·ailable for sampling in ra<'h tinw JWriod. and the speond eolumn gin's t}w adual number usPd after randomly sampling subdiYisions \\·ith sizes greater than .~000. In total. 'io 0/o of thP a\-ailable subjects \\Tn' adually . usrd in (•akulating kin:-;hip l'O('fti('il'llt:->. Tlw a,·eragP inbn' rding <'oeffi<"ient. F. for thP entin' :-;ample (-l3;)/'i7 of .J7:?H71 indi,·idual:-;) i:-; 0-000106. Thr a,·rragr within-groups random inbreeding eoeffi('iPnt. f~. is abo quite lo\\· (O·ooo:H:?). rPfkding th<' relati\'Ply large population sizes of most subdi,·isions. :-\,-oidancP of ('onsanguinity is indicated by the fact that}~ i:-; approximately thrC'P time~ grPater than F. The a\'Pragt• within-groups Fr ,·aluP obtaitwd from ison.Ym:· data is SP\-eral times higher than that Inbreeding in the Ctah J!ormons 343 Table 1. Sample sizes for each birth cohort (The total ·ample size a,·ailable in the database is given in column l. and the actual sample used for ealrulating kinship eoefficient:,.; is gi,·en in column 2.) Birth cohort 18-t6- 18ss 18s6- r86s 1866- 1875 1876- 1885 r886- 1895 1896- 1905 1906- I915 1916- 1925 1926- 1935 1936- 1945 Total "'8 ' 88d ,ng Coef f 1C1en T otal ~ampled 6oos 25 516 41580 57 481 68-t34 74021 80233 8t963 72 s78 65 16o 572 971 6oos 25 516 37 33 I 47484 52 749 55 936 s8 532 s86o2 50484 43 138 435 777 I x 10 CCO ) Q - \,.. ! I I I 6 ;._ 21 ! I 18 46 1856 1866 ~6 76 q56 18 96 190 6 19 1 6 19 26 1936 10 - yea" 8 1rtf-1 Cory· Fig. I. .\ n •rage random and total inbreeding coefficient!" in each 10-year birth eohort. obtained from genealocries: 0·001186. The corresponding \·alue for the migration data is an order of magnitud£' lower than the pedigree-obtained Yalue: 0·000038. Temporal \·ariation in random and nonrandom inbreeding is illu . . trated in Fig . 1. Total inbreeding has a \·alue of nearly zero in the first birth cohort. reflecting in part a lack of prdigrre depth . Th£' \·alue increa!:ics to approximately :2 x to--t in the 1876-85 cohort. after whirh it gradually d£'dine~ through most of the time period. Random inbr£'eding is highe. tin the earliest cohort. dm• to relatin•ly low population sizr . . and thr consrqucnt greater wright of sibling~ and other rlo!-~r relatiYes in the computation of aYerage random inbreeding. As population ~ize · increa c through time. random inbreeding decreases. It should be pointed out that the F and Fr value!:i :hown in this graph are not strictly comparable. This is because the F values are ba:::;f•d L. B. ,JORDE urrber of lnore o 1nd1v1dua1s 1856 1866 1876 1886 1896 1906 1916 1926 1936 8 1rt h Cohor t Fig . ~- ~5-6 3-4 Frequeney of inbred indi,·iduals in each lO·year birth eohort. subdivided into three levels of inbreeding : 0·5 3 and 0·5 4 • 0·5 5 and 0·5 6 • and < 0·5 6 • on kinship coefficients between the parents of the individuals in each birth cohort, while the Fr ,·alues are based on kin~hip coefficients calculated between the individuals themseh·es in each birth c·ohort . Figure 2 ~hows the temporal distribution of inbreeding after dividing inbred subjects into thn'C' lf' \·pJ:..; of inhn'<'ding c·o('ffi(·i('nt~: 0·;) 3 and 0·0"'. 0·.-) 5 and 0·0 6 . and )(':-:;~than 0·0 6 . \\"hile · du;-;t· · inhn·t·dintr t<·rHl=-- to dccrea:-;e through time (after rea('hing a maximum in the l~i'H hirth ('ohort ). the more remote inbreeding classes eontinue to increast> through time. As expeC'tt>d for a g<'nealogy growing in complexity. the most r<.'mot(> eatrgor!· of in breeding incrrases ~u b~tant ially only after 1916, but then grows rapidly. In order to assess urban- rural differences in inbreeding patterns, average inbreeding rates \\'Pn' cakulatcd separately for the four stakes containing urban centrc.s (Salt Lake take. l·tah :-:takP. ('a(·hP stake. and \V('ber stake) and for the remaining 18 subdivi ions. Random and total inbr<'r·ding for these two groups in each timP period are pres<:>nted in Table 2. As exp<:>cted. both ('atPgories of inbreeding are higher for the rural !'ubdi,·isions than for the urban ones (with the e:x<"C'ption of total inbreeding in the 1876- 85 <"ohort). The urban- rural diffen•nte is greater for random in hn·<·ding than for total in bret>d in g. ho\\.C'Yt>r. Tlw n ' lat i\·ely high d<:>gree of random inhtTt·ding rdlec-ts the small an·rage samplt> sizes for th<' rural stake~ . For all tinw period::s <·omhirl<'d. th<· F and}~ ,·alm·s for thl' urban :;takes are 0·00009 and 0·000 11. whilP thos<:> for the ru raJ :-.t akt's are 0·000 13 and 0·000 ;);). Thus. thP relat in.' deg:rPe of depart un' from random mating i:-: :-;ubstantially greater in the rural subdi,·isions. As anticipated. tlw produd-momcnt <·orr<"lation bctw<·Pn stake population size (a,·eraged on'r all tinw p(•riods) and r~ i~ twgatiY(' and signifit·ant (r = -0·;)39. P < 0·01 ). The correlation between F and population size. whik in the t'XJH'ded din•etion. is not :ignifkant (r = -0·235. P > 0·29) . This n·sult is c·onsistent with the tinding that the urban and rural subdi,·ision~ differ more with regard to }~than F. Inbreeding in the Ctah Jformons 345 Table 2. Arfrage stake population . i:es. total inbreeding (F). and random inbreeding (Fr) in urban and rural 8lakes (Inbreerl ing \·aluE>s are multiplied by 10 4 .) l·rhan Birth cohort r8-t6 - r8s5 1856- 1865 1866- 1875 r876 - r885 1886- 1895 1896- 1905 1906- 1915 1916- 1925 1()26- 1935 19)6- 1945 .-\ \' ~ · :- l Zt' F Of) ·8 3 870'0 554.5 '5 7 4os ·8 8809 '0 9366·o 10421 '0 10840'3 10 523 '5 10505'5 o·oo o·48 o·67 2' 10 !'OJ 1'19 0'70 o·62 0'70 0'74 I Rural r: .-\\·g . size F F, 2'75 1'94 1'73 1'47 1' 28 1' 16 1'01 o·88 0'76 o ·66 89·-t 557·6 1077'7 15-t 7'7 1844' 3 2030'9 2141'6 2144'6 1693'6 128s·-t o·oo o·s6 1'01 1' 55 1'48 1'40 1' 14 1·05 1'21 1'41 LV75 7·56 6·3o s·82 s·76 s·-t8 5'26 4'95 4·8s 4'98 Table 3. Fst mlues estimated from migration matrices, isonymy. and pedigrees (Yalues are multiplied by 104 .) ~ligration Birth cohort 1876188618961906 1916 192619J6- r88s 1895 1905 19I5 1925 1935 I945 Total matrix Isonymy PedigrE>e 0'029 o·155 0'340 o·-t68 0'-t28 O'JSO 0'27-t 8·781 8·3o8 7'726 i"047 6·428 5'925 6·!62 3'384 3'182 3' 137 2'827 2' 51-t 2' 197 2'316 0'304 7' 383 2'837 F8 t values obtained from pedigree data, isonymy , and migration matrices are presented in Tabl<> 3. For comparability with the migration matrix results published previously, only the birth cohorts b£'ginning with 1876 are included here. Examination of the values for the total time period shows that isonymy give::; the largest f~ 1 value (0·000 74). p£'digree data gi,·e the next large.' t ,·alue (0·000 :28). and migration matrices give a much smaller ,·alue (0·00003). The pedigree and isonymy e::stimates display very similar temporal patterns; both gradually decrca e through time. with a ,·cry -:light increase in the final time period. The migration matrix Fst ,·alues. on the other hand. are lowest in the first time period. reach a maximum in the 1906-15 birth cohort. and decline thereafter. To a large extent. thc low ,·alues in the fir~t three time period .. reflect the extremely high immigration rates during thE' colonization pha:-:e (most parents ha,·ing bren born outsidr l·tah). Sinre the migration matrix model as. umc~ that outsidr immigrants eome from a grnrtieally homogPnrous population. a high proportion of~uch immigrant:-: result. in a substantially lowered f~ 1 rstimate. Thr rt>lation 'hip brtwren random kinship and geographie dista,n('e is dcpicted graphically in Fig. 3. ln general. the genrt ic rei at iunshi ps bet wern su bdi,·ision~ are fairly <:on<'ordant with their groo-raphic distances. indicating an important isolation by distanrc effect in this population. The Rr ,·alue for kim•hip r.s. geographic distance is 0·775. \\'ithout a logarithmi<: transformation of$. the Rc ,·alue is substantially smaller (0·453). Figur£' 3 bears a remarkable L. H.JORDE :3-H> * I L 20 --~ 18 * * 21---------- ~ * 19 L 0 ......... u Q) 6 ------------"-* * > c Q) C/) w 8----* * * ·~ * 13 Eigenvector 2 F i!! . :~ . .-'\ · gt>rwtil' map · in \\·hil'h tlw tir;-;t two t'i~t->11\'N•tor:-; of In<!> art> plottt>d again;-;t nrw anntlwr and rotatt>d to maximum C'ongrUPIH'P with tlw gPnt!raphi(' lo('ati(lns of tlw J>tlj>Hiati t!Jb. E.l <' h numlwr indi<·att>:-> tht> geographi(· lo(·ation of a population . Tlw lint> nt>.xt to t>ad1 numbt>r ~ ·omwd:-:: it to tht' • which indicates the coordinates of the population as defined b~· its loading:-; on the first two eigenwctors of <!> . Thus. each line is a graphiral measure of the goodness of tit between <J> and geographic distance. resemblance to the eigenvector plot published earlier for kinship based on migration matrices (.Jord<'. 198:?). In fact , the Rc \·aluc for the first two eigenn.• ctors of <1> ba~ed on pedigrC'C' data \'C'rsu~ <I> based on thC' migration matrix is Yery high indeed: 0·9i9. Again . this figure' is based on logarithmically transformed kinship matrices. \\'ithout thC' tran~formation . the R, \·alm• falls to O·i-tO. Tahlt' 4 gin's correlation \'alues for C'ad1 type of kinship c-ompared with geographi(' distance' . The ::-ignifil'aneC' IC'\'els wen' obtainC'd u::-ing the ~lantC'l tC'chnique. For t}w total ~ample. the ct> matrix ba:-'C'd on migration data yiC'lct~ the highc~t <:OITPlation with ge<)tfraphi(' di:-:tc:m<'l'. while t}w <I> matrix based on i!:'onymy data yiC'!cts thC' lo\\·est correlation . As \\·ith the }~ 1 C'~timate:-:. the temporal pattern:-:; ba:-;('d on i~onym~· and pedigree data an' n . . ry ~i milar. while the pat t('rn ba~C'd on migration matriees is some\\·hat diYergent. .-\ dirert comparison of each type of kinship matrix i~ presented in Table 3. HerC'. the <·orrelation~ \·crsu~ and significance' \·aluC's are givC'n for pedigree \' r.-us migration data. pedigree 1sonymy data. and 1sonymy \·ersus migration data. A~ expected from the re:sults 347 Inbreeding in the Ctah Jlormons Table -1. Correlation coefficients. with standard errors, for kinship matrices (transformed into distance matrices) Birth cohort I876- 1885 I886-I895 I896-1905 I906-I9I5 I9I6- 1925 I926-1935 1936-1945 Total ~·ersus :\Jigration matrix geographic distance I sony my Pedigree o·283±o·II4* o· I J 2 ±o· I I 6 o· I 86 ± o· I I 6 o· I 9 5 ± o· I I 7 * 0'227±0'II7* 0·298 ± o· I I 6** 0"347 ± o· I I6** o·253 ± o· 1 17* o·281±o·r17* o·287±o·116** o·259±o·r 17* o·z63 ± o· r I 7** o·264 ± o· I r7** o·o63 ± o· I I 8 o·265 ±o·I I8* 0·302 ± o· I I 8** 0·304 ± o· I I 8** 0"298 ± o· I I 8** 0'290±o·I I8* o·287±o·I I8* o·qi ±o·I I8 o·39o±o·Iq*** o·245±o·II7* o·282±o·118* * P < 0·05 ; * * P < O·O l : ** * P < 0·00 l. Table 5. Correlation coefficients. u·ith standard errors. for pairs of kin.ship matrices Birth cohort I876- 1885 I886-I895 I896-1905 I906- 19I5 19t6-I925 1926-I935 1936- 1945 Total :\Jigration/ Isonymy Isonymy/ Pedigree :\1igration/ Pedigree 0'746 ± 0'205 ** 0'3I3±0'209 0"425 ± 0'209* o·654±o·2I2*** o·6o9 ± o·2 I 3 ** o·624 ± o·2 I 2 ** o· 204 ± o· 2 1 2 0'757 ± 0'207** o·272 ± o·z I 2 o·3o6±o·213 0'585 ±0'2I4** o·623 ± o·2 I 5 ** o·653 ± o·214 ** 0"327 ± 0'2I 3 0·976 ± 0'2 I 6** o·939 ± o·2 I 4 *** 0'927 ± 0'2 I 4 *** 0'945 ± 0'21 5 *** o·96o ± o·2 I 6*** 0·958 ± 0'2 I 6*** o·963±o·2I8** o·8o7±o·2I3*** o·8n±o·z15*** o·959±o·z16*** • p < 0·0.'1: ** p < 0·01: *** p < l)·Otll. presented thus far, the greatest le\·el of concordance is seen between the isonymy and pedigree data: all correlations exceed 0·920. and nearly all oft he significance values reach the O·OOllevel. The migration- and pedigree-derived <J) matrices exhibit some\vhat lower correlations, but the correlation for all time period~ is still quite high (r = 0·873. P < 0·001 ). The lowest o\-erall correlation is obtained for isonymy versus migration, but it is again relatively high and significant (r = 0·807. P < 0·00 I). For the total time period, a multivariate comparison of the~e matrices was carried out by regressing the pedigree-dc.r ived kinship matrix on three independent variables: geographic di~tance. kinship based on migration, and kinship based on i.. onymy. This regression yielded an R 2 value of 0·9-1 7 (P < 0·001 ). An evaluation of all possible subsets of the independent variables ga,·e R 2 ,-aluc~ of0·765. 0·923. and 0·9-1 7 for the combinations of geographic di:stance/migration. geographic eli ·tance/isonymy. and migration/isonymy. re:spccti,·ely. The R 2 ,·alues for the independent ,·ariables sinal.'· were 0·080. 0·762. and 0·920 (geographic distance. migration. and isonymy. respecti,·el:·). These statistic show that. once i~onymy was entered a~ a predictive variable. migration yielded little additional predicti,·e pmn_'r. and geographic distance yielded almo~t none at all. Another way to compare isonymy and pedign'e data irn·oh·es a dire(·t t'\·aluation of the degree of as:-.;ociation between eon~anguirwoui:' and i:-:onymous marriages. From this data set. 132093 marriages between l·tah-born couples were cYaluated in term .. of 1sonymy and L. B.. JoRDE Table 6. ('ross-tabulation ()f /...;onymous rs. ronsanguinf'ous marriagfs 1:-;on~·mous :\on - i:-;un.\'lnous ( 'onsanguim•11U:-; :\(m - 1·onsanguirwow~ -t7 593 523 IJ0930 x2 = -:-o-t-:3 : 1) < o·oOJ . <:on:-:angum1ty. The an'rage F Yalue for the .)/0 isonymous marriage~ 111 thi:-: ~ample was 0·00:3/0 . while the an·rage F ,·aluc among the 1315:?3 non-isonymous marriage~ wa. 0·00009. This diffcrcnce was highly significant (P < 0·001) using both a l test and a non-parametric mt>dian test. A C'rosstabulation of isonymy versus consanguinity for these marriages i gi,·en in Table 6. These values re,·eal a highly significant as ·ociation between con ~ anguinity and isonymy (i~ = 704·3, P < 0·001). Among the isonymous marriages 8·3 o/o are consanguineous, ·w hilr only 0·-!5 o/o of the non-isonymous marriages are consanguineous. These figures. while . ub tantiating an association between isonymy and consanguinity, are not clo ely in accord with the theory of isonymy. ThP isonymy mrthod assumes that F = P/4. where P i the proportion of isonymous marriages in the population (Crow & ~lange. 1965). SinC'c the an•rage kin. hip coefficient in this sample of marriagPs is 0·000 104. the proportion of isonymous marriage~ should be 0·000416. or 55 marriages. The aC'tual number of same-name marriages. 570 , is tc·n times greater than tht> isonymy method predicts. \\'hen stepwise multiple linear regression was applied to these data , three independent variable entered the equation predicting consanguinity levels in marriages. The first ,·ariable to enter the equation was year of marriage. which. as expected from Fig. 1. was negati,·ely a ~o<'iatcd with consanguinity. The second variable to enter the equation was the population size of thP wife's birthplace. As anticipated from population genetic theory and the rrsults of the url>an-rural compari:-;on. the relation:->hip bctwePn population size and C'On:o:anguinity \\·a~ negatin·. Finally. geographic di:-:te:uH·e bet\n•en hu~band's and wife's birthpla('e entered the rquation. again showing a negatin_ " assoC'iation with consanguinity. \rhile all of these ,·ariables had a highly significant relationship with consanguinity (P < 0·001 ), the multiple R value was only 0·0:27. indicating that they do not explain much of the \'arianee in C'On~anguinity. In the logistic regression analysis. ·stake endogamy· was the first ,·aria ble to enter the equation . The odds ratio here is 0·45 (95 °/o confidence limits = 0·37. 0·5-l ). indicating that cxogamou~ couples are about half as likely to be consanguineous as arc endogamou~ couples. The population sizes of wife's and husband's birthplace's were the next two variabl(•s to Pnter the equation . The odds ratios for these two \'ariablcs werP 1·36 (95 °/o C'onfidenc·p limits = 1·:?0. 1·5-!) and 1·:26 (95 o/o confidence limits = 1·12. 1·43 ). re~pcct ivcl~·. As CXJW<"ted. t lwsc odds ratios show that couples born in larger ~takes are less likrly to be consanguinPous . The last Yariable to entPr thP cquat ion was year of marriage (odds ratio = 0·73. 95 °/o confidetH'P limit~ = 0·68. 0·79). This odds ratio indicates that couples marrird more re<'cntly havP a higher probability of l)('inp: <'On~anguincous. which seems contradictory to th<> results of t}w multiple linear n•gres~ion . Howe\'(_'r. the logistic regression spt>cifies simply the probability that t"ouples will be related to o1w another at any lc,·el. while the multiple linear regression predicts the actual kim•hip eorfficient. As Fig. 2 showR. the actual number of inbred individual::- (and therpfore consanguineous marriages) docs incrcaRc through time. but thi~ increase is due to more rrmotc lcH'ls of consanguinity. Thus. while the probability of consanguinity docs increase through Inbreeding in the Utah Jlormons 349 time, the a\·erage kinship coefficient decreases through time. The X2 goodness-of-fit test for the logistic model yield~ a P value of0·50, indicating that the logistic model fib these data \"ery well. DISCrSSION Pedigree . isonymy. and migration data all show that inbreeding rates in the lrtah ~lormon population are \·ery low . Since random inbreeding exceeds total inbreeding in this population. a slight excess of heterozygotes should be observed (Allen. 1965) ..-\gene frequency analysis showed that all loei investigated wPre in Hardy- \\'einberg equilibrium (~!cLellan et al. 1984) and that some loci exhibited an excess of heterozygotes while others had a deficiency. Genotype proportion._ are the product of multiple evolutionary forces (\\'orkman, 1969), and the Hardy- \\'einberg procedure can be quite insensitive to indi,·idual factors such as inbreeding (.X eel et al. 1964; Jenkins et al. 1985). Xonetheless, these gene frequency results are at least con ·istent \\·ith expectations for an out bred population. In an earlier study of consanguinity in Ptah, \Voolf et al. (1956) reported average kinship values for a total of 36909 Ctah marriages. For marriages occurring between 1847 and 19:29. they obtained a\·erage kinship coefficients ranging from a maximum of 0·00088 (187Q-89 marriage cohort) to a minimum of0·00026 (1910-29 marriage cohort). \Vhile these values again demonstrate a low le,·el of consanguinity in this population, they are somewhat higher than the values reported in the present study. This may reflect in part the more complete sample of marriages used here. In addition, the computerized database is truncated in earlier years because of the inclusion criterion that a nuclear family must ha,·e had a ,·ital event (birth or death) o<:eurring in l'tah or along the 'pioneer trail'leading to t•tah . In \\'oolf study. families could be traced further back in time. accounting for a greater difference between the two studies in the earlier time periods. Se,·eral comprehensi\·e reviews of consanguinity le,·els in human populations have been published (Cavalli-Sforza & Bodmer, 1971; Freire-Maia, 1957; Lebel, 1983; McCullough & O'Rourke. 1986; Reid, 1973). Comparison of the Utah Mormon inbreeding rate of approximately 10-.a with the rates published in these studies shows that inbreeding in this population is relatively quite low. A particularly useful comparison is provided by the "·isconsin Roman Catholic population studied by Lebel (1983). Csing dispensation record . this study documents a gradual rise in a\·erage kinship coefficients to a maximum of about 4 x 10- 4 at the turn of the century. followed by a gradual decline to slightly 0\·er lo-s in recent years. In general, the:se \·alues are quite similar to those obtained for the Ctah .\Iormon population. Thi pattern of temporal decline in inbreeding , particularly during the 20th century. has been seen in most human populations (e.g. Brennan & Relethford. 1983: lmaizumi, 1986: Khlat. 1988: O'Brien et al. 1988; Pettener, 1985; Saug tad, 1977 : Sutter & Goux, 1962) and can usually be ascribed to increased migration rates and population mixture a.;: transportation and communication facilitie:::; improve. \\'hile total inbreeding generally decreases through time. there is a gradual buildup of remote consanguinity. )lo~t other genealogical studies of inbreeding show a similar pattern. and in many studies rcmotf' consanguinity can lead to a rather large inbreeding eoefficient (Bear fl al. 1988: Hu ·sels, 1969: Leslie el al . 1981 ; O'Brien el a!. 1988: Robt>rt~. 1969: Spuhler & Kluckhohn. 195:3). In this population, however. continued population growth and high ~igration rates eaust'd total inbreeding to remain nearly constant after 1886, while random :3.)() L. H. ,JoRDE inbreeding continued to decrease. The great majority of marriages in thi:s population we contraf'ted between individuals who were unrelated at any le,·el. Other studie, have also show that population growth and migration can mitigate thC' effec·ts of ron. anguinity buildu through time (O'BriC'n Pta!. 1988: Relcthford. 1986: \\'ard et al. 1980). Thf' rural - urban compari:;;on of inbn·crling rates .:-:howed that rural inbreeding wai' rough! 50 °/o greater than that of the urban stakes. while random inbreeding in rural area w approximately 5 times higher than in the urban stakes. \\' oolf pf a!. ( 19.!)6) also analysed separate ~ample of rural l'tah marriages and obtained an average kinship coefficient of0·001 for 625 marriages in nine small communities. This figure is more than an order of magnitud higher than the average figure obtained in this study for 259430 indi,·iduals born in rura takes. The communities chosen in \\'oolfs study. howen~r. were selected a priori on the basi that they appeared to manifest high inbreeding levels and are thus probably not representativ of the entire rural population. The \·alues reported here reflect more accurately the overal inbreeding rate in rural etah. The elevated inbreeding rate in the rural portion of th · population is consistent with the findings of several other studies (Freire-~1aia et al. 1983 Geddc- Dahl. 1973: Rao et a!. 1972). One of the most instructi\·e aspects of this study is the comparison of random kin hip on migration matrices. isonymy. and pedigree data. Deficiencies in each approach are re,·eal by this comparison. The primary weakness of pedigree data is that inbreeding is underestimat in the early time periods due to truncation of the genealogies. In the present study, this i probably not a serious deficiency because the founders of the population came from div parts of the Cnited States and northern Europe. Most were thus not likely to be related to on a not her. The isonymy data consistently overestimated random inbreeding and F6 ,. Also. tota inbret>ding c:-;timated by i:..;onym_\. nuied lwtwccn (}00.!) and 0·001 for the birth ('Oh ort <·on:..;i<.kn:d hcrC' (Jorde & ~I organ. l Bt-~'7 ). while total in breeding mca!:'ured from pedigree da t \·aried between 0·00005 and 0·0002. Rogers (1987) compared isonymy and pedigree estimat of inbreeding in nine populations and showed that isonymy estimates exceeded pedi estimates in every case but one. The magnitudes of these overestimates varied from 2-fold t 200-fold. SeYcral additional studies have revealed similar results (Hurd. 1983: Roberts & Roberts. 1983; Robinson. 1983). A common explanation for these inflated e:stimates is th polyph_dctic origin of surnames (i.e. the same surname can be derived from multiple. unrelated an<:cstors). This is undoubtedly an important source of error in the l~tah ~Iormon population. since many of the Scandina,·ians used patronyms and many other menibcrs of the population had oe<·upationaJ surnamei'. Table 6 . whi<-h shows that !)2 o;;) of isonymou~ marriages are not c·onsanguincous. substantiates the polyph~·letic origin of surnames in this population. Another .·our<:e of o\·ercstimation has bPen explore>d by Tay & Yip ( l H8-!). They ·hm' t lworl't il'ally that inbreeding estimated from isonymy i:..; exaggcra ted in population:.; with lo\\ inhn·Pding \·alucs. ThC' on'rc:-;timation is even greatC'r \\·hen random inbreeding p:..;timatcd b.\ isonymy is much larger than total inbn·<.'ding cstimat<.'d from pedign•e:..;. Both ofthc:..;e attribute. an· sPen in the ~lormon population as wp)] a.· many other human populations. Another important assumption of t.hP isonymy mPthod is that males and females migrate in equal pro port ions (Crow & ~lange. 1965 ). This assumption is also \·iolatcd in the l'tah ~lormon population : males ha \'C been considerably more mobile than females (J ordc. 1982). Finally. t h< Inbreeding in the Ctah Jformons 351 isonymy method assumes that the variances in the number of offspring born to males and females are equal. an assumption which holds in strictly monogamous societies (Crow. 1983). Polygyny was practised in Ctah during the 19th century. \\'hile only a small minority of males had multiple wives. polygyny ubRtantially increased the variance of progeny size among males (Jorde & Durbize. 1986) . Con!'idering these as umptions and results. it is clear that i onymy methods are most reliable when applied to small. closed populations in which a limited number of distinct surnames were present among the founders (Crow. 1980). \\'hile isonymy tends to o\·ere:;timate inbreeding and genetic differentiation in this population. the migration matrix approach underestimates these quantities. This result stands in contrast to two other studies that compared these two approaches and found higher estimates of Fst when migration data were usC'd (Fuster. 1986: Relethford. 1986). In the pre ent study, the differences arc clearly attributable to assumptions inherent in the migration matrix model. One of the .. e is that immigrant are deri\·ed from a homogC'neous outside population. A collateral assumption is that the initial founding population is genetically homogeneous. Both of these assumptions are inaccurate for the l'tah population and ha,·e Jed to underestimates of random inbreeding and genetic differentiation. A third assumption. to be discussed in greater detail below, is that migration patterns among subdivisions are at equilibrium (i.e. they do not change from one genC'ration to the next). In this rapidly colonizing population. migration patterns changed considerably through time. \\'hile the migration matrix. isonymy. and pedigree methods yielded somewhat di,·ergent estimates of F81 • it should be emphasized that all of these estimate's are in the low range for human populations (SC'e Jorde ( 1980) and Relethford ( 1988) for <"Om para tin' n-1ltH.'s) . ln eYaluating inbre<.'ding estimates based on different typ('s of data. it is important to emphasize that inbreeding is always measurC'd relatice to a gi,·en reference' population (\rright. 1969). For the genealogy data. the reference population is the large set of foundC'rs who initially came to lTtah. lsonymy estimates, like gene frequency estimates reflect the effects of events occurring many generations in the past (Crow, 1983). The reference populations represented by the isonymy and genealogy measures are thereforP quite different. and this may account for some of the differences obsen·ed in the estimates. The compari:son of earh type of kin ·hip matrix with geographic distanr(' showed that. considering all time period . the migration matrix estimates yif'lded the hight>:st correlation ,.,.·ith geographic distance. while those of isonymy had the lowest correlation with geographie di tance. This result was obtained using both the ~lantel tC'chnique and the eigt>n\·ector technique. This pattern did not hold. howe,·er. in ('ach individual time period. It was ~uggested previously that the lower correlation between isonymy and g('ographir distance i. due to thP nonrandom settiPment of l'tah by diffC'rent northern European population group. (.Jorde & ~!organ. 1987) . In a n'cPnt analysi~ of a French Canadian population. Gradie PIal. ( 198~) also found low concordance between isonymy and g('ographic distance while obtaining good eoncordaner b('twecn migration-drri,·t>d kinship and g('ographic distance . ~mith (1988) obtained a :-;irnilar rPsult in an analy~i::- of a Briti!"h population. After n'\·i<'\ring the literature on ueh eomparisons ..Jordr & :\lorg:an ( 1987) concluded that the <.·oneordatH·e bet\n'en isonymy and geographic distan(·(' :erms to bP low in r('c<.>ntly foundPd population~ and high('r in \\·ellestablished populations. Thi:::: rdh'ct~ the accumulation of an isolation by distancr rffPct on'r time. L. B.JORDE Dirr<:t comparison of all three types of kinship matrices using the ~lantel technique showed substantially greater congruence between isonymy- and pedigree-derin"d kin -hip estimates than bet w~en the other 2 pairs of estimates. It is very interesting. though. that the migration matrix e ·timates. while not correlating high]~· with the other e~timate~ in indi,·idual time p<'riod=- . correlated ,·ery highly with both estimates when all time periods were combined. In addition . the eigenH"etor plots based on pedigree and migration data are extremely ~imilar. This sugg<'~t~ that. by combining data o\·er iO years. a pattern more similar to ·equilibrium· is being obtained. yielding a more reliable estimate of between-groups kinship. \Yhile there were rather large discrepancies among the differet data types in estimates of random and total inbreeding coefficient , the patterns of between-subdivision relationships are remarkably similar. This seems reasonable, since most of the assumptions discussed above tend to bias these estimates in the ~ arne direction in each subdivision (overestimation of values derived from isonymy, underestimation of values derived from migration matrices). Provided that the biases are fairly consistent among subdivisions, they will not distort between-groups relationships. The regression analyses are useful in helping to determine the causes of variation in inbreeding patterns. For the most part, the linear and logistic regression analyses yielded similar re ~ ults. Both indicated that population size is negatively correlated with inbreeding. The linear regression showed that geographic distance between husband's and wife's birthplaces is negatively associated with inbreeding. while the logistic regression showed that "take endogamy is positively associated with inbreeding. Since geographic distance and endogamy show a trong inverse correlation (r = -0·64) , these results are congruent. As explained abO\~e, the differing signs for the regression coefficient for 'year of marriage· in the two analyses; reflect the buildup of remote consanguinity which is measured in the linear regression but not in the logi~tie rPgression. In a previous logistic regression analysis of isonymy data. year of marriage and ~t'o ura phic distancr both corrPla t<'cl negatively with probability of i~onymou~ marriage (.Jordt> & :\lorgan. 1981). Thesl' rp;-;ult~ are also eonf.ii:-::;tt>nt with those of t}w pn'!"Cnt :-'tudy and with population genetic theory. The main difference between the regression analyses ba~ed on pedigree and isonymy data is that the isonymyanalysis did not indicate a population size effect. The strong dependency of consanguinity upon population size in indi,·idual marriages is eoni'istent with the correlation between subdiYision size and average within-subdivision inbrePding len~ls. Considering that the great majority of i onymou marriages are not in fact eon:'anguineous. one would not expert isonymy to exhibit as high a degrpe of dependenc-y upon population size. In :'ummary. the pedigree results presented here largely corroboratP pre\·iou~ result:' ha:'cd on migration matrices. isonymy. and gPne frequencies: the l"tah ~lormon population i.~ out bre<L homogerwous. and ha~ experiPnced little gerwt it drift :-:inc<' it::-: found in g . .-\' a <·onspqueneP. onP would Pxpcct the distribution and prevalPnce of gcn<>t ie di~ea~c~ in this population to bP quite similar to those of other t·.s. populations. \\'hile an PXtPn::-:in' in\-<' ntory of g<•Jwtic· disPa::-:cs has not yet been c·arried out in Ctah. the pre\·alenc-r rate:-; of eL•rtain f!Plwti<· di!'ea~t.· ;-; (or di!'eases with genetic· tomponPnb) haYc been l'stimated. Among 19:2083 l"tah birth~ from 1983 to 198i. 15 were affpeted with elassical PK l' (C'. 0. LPonard . :\1. D.. ppr;-;nnal <:ommunication). This gives a birth prt'\·alence estimate of 1112806. a fignrP whivh i!' in a<"vord with the (·ommonly cited estimates of 1I 10000 to 1I 15000 for PK l" in Ca ueasian population:-' (~c-rin:r & Clow. 1980). In addition . hemochromatosis (Edwards et al. 1988). neural tube defec·b inbreeding in the Ctah . lforrnons 353 (.Jorde et al. 1983), and autism (Rih·o et al. 1989) all occur with frequencies similar to those found in P.S. and European populations. The com pari on of kinship e ·timates based on genealogies. isonymy . and migration matrices ~howPcl that the as~ umption~ underlying each method ran produce din•rgent estimate:.: of total inbrPeclina and random kin. hip . If rPiiable estimatP · of inbreeding are to be obtained with isonymy and migration data. i1westigator must dc\·ote. considPrable attention to possible \·iolation of the e as~umption .. On a more sanguine note. these methods yielded fairly consi~tent results in terms of bet\\·een-groups kinship patterns . 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